RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 CEP170BQ9Y4F5 1589 aaPredicted RBP33.66■■■□□ 2.98
TSPAN4-202ENST00000397396 MYO5BQ9ULV0 1848 aa33.65■■■□□ 2.98
TSPAN4-202ENST00000397396 KDM2AQ9Y2K7 1162 aa33.64■■■□□ 2.98
TSPAN4-202ENST00000397396 PRAG1Q86YV5 1406 aa33.64■■■□□ 2.98
TSPAN4-202ENST00000397396 HDGFP51858 240 aaKnown RBP33.62■■■□□ 2.97
TSPAN4-202ENST00000397396 ZFYVE9O95405 1425 aa33.62■■■□□ 2.97
TSPAN4-202ENST00000397396 VGFO15240 615 aaPredicted RBP33.61■■■□□ 2.97
TSPAN4-202ENST00000397396 THEMISQ8N1K5 641 aaPredicted RBP33.59■■■□□ 2.97
TSPAN4-202ENST00000397396 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.59■■■□□ 2.97
TSPAN4-202ENST00000397396 NRXN1Q9ULB1 1477 aa33.59■■■□□ 2.97
TSPAN4-202ENST00000397396 RIMS2Q9UQ26 1411 aa33.58■■■□□ 2.97
TSPAN4-202ENST00000397396 TMEM2Q9UHN6 1383 aa33.57■■■□□ 2.96
TSPAN4-202ENST00000397396 RALGAPBQ86X10 1494 aa33.55■■■□□ 2.96
TSPAN4-202ENST00000397396 SLIT1O75093 1534 aa33.54■■■□□ 2.96
TSPAN4-202ENST00000397396 NBPF8Q3BBV2 869 aa33.53■■■□□ 2.96
TSPAN4-202ENST00000397396 ARHGAP23Q9P227 1491 aa33.51■■■□□ 2.96
TSPAN4-202ENST00000397396 PIK3C2GO75747 1445 aa33.5■■■□□ 2.95
TSPAN4-202ENST00000397396 KIAA1210Q9ULL0 1709 aa33.5■■■□□ 2.95
TSPAN4-202ENST00000397396 TRPM1Q7Z4N2 1603 aa33.49■■■□□ 2.95
TSPAN4-202ENST00000397396 ADGRF5Q8IZF2 1346 aa33.49■■■□□ 2.95
TSPAN4-202ENST00000397396 EID1Q9Y6B2 187 aa33.48■■■□□ 2.95
TSPAN4-202ENST00000397396 LAMC1P11047 1609 aa33.46■■■□□ 2.95
TSPAN4-202ENST00000397396 ROCK2O75116 1388 aaKnown RBP33.43■■■□□ 2.94
TSPAN4-202ENST00000397396 GPRASP1Q5JY77 1395 aa33.41■■■□□ 2.94
TSPAN4-202ENST00000397396 SCAF11Q99590 1463 aaKnown RBP33.39■■■□□ 2.94
TSPAN4-202ENST00000397396 NUTM2DQ5VT03 806 aaPredicted RBP33.38■■■□□ 2.93
TSPAN4-202ENST00000397396 PLEKHG1Q9ULL1 1385 aa33.38■■■□□ 2.93
TSPAN4-202ENST00000397396 TXNDC2Q86VQ3 553 aa33.37■■■□□ 2.93
TSPAN4-202ENST00000397396 SETBP1Q9Y6X0 1596 aa33.37■■■□□ 2.93
TSPAN4-202ENST00000397396 C14orf93Q9H972 538 aaKnown RBP33.36■■■□□ 2.93
TSPAN4-202ENST00000397396 CARD11Q9BXL7 1154 aa33.35■■■□□ 2.93
TSPAN4-202ENST00000397396 ANKLE2Q86XL3 938 aa33.33■■■□□ 2.93
TSPAN4-202ENST00000397396 CFAP70Q5T0N1 1121 aa33.31■■■□□ 2.92
TSPAN4-202ENST00000397396 LTKP29376 864 aa33.3■■■□□ 2.92
TSPAN4-202ENST00000397396 ALKQ9UM73 1620 aa33.29■■■□□ 2.92
TSPAN4-202ENST00000397396 EIF4G2P78344 907 aaKnown RBP eCLIP33.28■■■□□ 2.92
TSPAN4-202ENST00000397396 LMTK3Q96Q04 1460 aa33.27■■■□□ 2.92
TSPAN4-202ENST00000397396 DIP2AQ14689 1571 aa33.27■■■□□ 2.92
TSPAN4-202ENST00000397396 NRXN3Q9Y4C0 1643 aa33.27■■■□□ 2.92
TSPAN4-202ENST00000397396 NBPF1Q3BBV0 1214 aa33.27■■■□□ 2.92
TSPAN4-202ENST00000397396 AEBP2Q6ZN18 517 aaPredicted RBP33.27■■■□□ 2.92
TSPAN4-202ENST00000397396 IQGAP1P46940 1657 aa33.25■■■□□ 2.91
TSPAN4-202ENST00000397396 POLR1AO95602 1720 aaPredicted RBP33.25■■■□□ 2.91
TSPAN4-202ENST00000397396 ADGRB1O14514 1584 aa33.25■■■□□ 2.91
TSPAN4-202ENST00000397396 USP47Q96K76 1375 aa33.25■■■□□ 2.91
TSPAN4-202ENST00000397396 BCANQ96GW7 911 aa33.25■■■□□ 2.91
TSPAN4-202ENST00000397396 EIF3AQ14152 1382 aaKnown RBP33.23■■■□□ 2.91
TSPAN4-202ENST00000397396 MED14O60244 1454 aa33.21■■■□□ 2.91
TSPAN4-202ENST00000397396 SETD1AO15047 1707 aaKnown RBP33.2■■■□□ 2.91
TSPAN4-202ENST00000397396 ADAMTS13Q76LX8 1427 aa33.19■■■□□ 2.9
TSPAN4-202ENST00000397396 NPHP4O75161 1426 aaPredicted RBP33.16■■■□□ 2.9
TSPAN4-202ENST00000397396 ASXL1Q8IXJ9 1541 aa33.16■■■□□ 2.9
TSPAN4-202ENST00000397396 HSPA5P11021 654 aaKnown RBP33.15■■■□□ 2.9
TSPAN4-202ENST00000397396 TBX22Q9Y458 520 aa33.15■■■□□ 2.9
TSPAN4-202ENST00000397396 YTHDC2Q9H6S0 1430 aaKnown RBP33.12■■■□□ 2.89
TSPAN4-202ENST00000397396 PIK3R4Q99570 1358 aa33.11■■■□□ 2.89
TSPAN4-202ENST00000397396 ZNF316A6NFI3 1004 aaPredicted RBP33.11■■■□□ 2.89
TSPAN4-202ENST00000397396 LRPPRCP42704 1394 aaKnown RBP33.1■■■□□ 2.89
TSPAN4-202ENST00000397396 TMEM132EQ6IEE7 984 aa33.1■■■□□ 2.89
TSPAN4-202ENST00000397396 SENP3Q9H4L4 574 aaPredicted RBP33.09■■■□□ 2.89
TSPAN4-202ENST00000397396 NCKAP5LQ9HCH0 1330 aa33.08■■■□□ 2.89
TSPAN4-202ENST00000397396 METP08581 1390 aa33.07■■■□□ 2.88
TSPAN4-202ENST00000397396 DLC1Q96QB1 1528 aa33.07■■■□□ 2.88
TSPAN4-202ENST00000397396 SLC24A1O60721 1099 aa33.06■■■□□ 2.88
TSPAN4-202ENST00000397396 HSPA2P54652 639 aa33.06■■■□□ 2.88
TSPAN4-202ENST00000397396 ABCC11Q96J66 1382 aa33.06■■■□□ 2.88
TSPAN4-202ENST00000397396 SLC26A8Q96RN1 970 aa33.05■■■□□ 2.88
TSPAN4-202ENST00000397396 KNDC1Q76NI1 1749 aa33.05■■■□□ 2.88
TSPAN4-202ENST00000397396 TECPR2O15040 1411 aa33.03■■■□□ 2.88
TSPAN4-202ENST00000397396 ST20-MTHFSA0A0A6YYL1 179 aa33.02■■■□□ 2.88
TSPAN4-202ENST00000397396 TRAK1Q9UPV9 953 aa33.02■■■□□ 2.88
TSPAN4-202ENST00000397396 ARHGEF28Q8N1W1 1705 aaKnown RBP33.02■■■□□ 2.88
TSPAN4-202ENST00000397396 CPS1P31327 1500 aa32.99■■■□□ 2.87
TSPAN4-202ENST00000397396 CENPJQ9HC77 1338 aaPredicted RBP32.99■■■□□ 2.87
TSPAN4-202ENST00000397396 SBNO2Q9Y2G9 1366 aa32.98■■■□□ 2.87
TSPAN4-202ENST00000397396 SIRT1Q96EB6 747 aa32.98■■■□□ 2.87
TSPAN4-202ENST00000397396 STK26Q9P289 416 aa32.98■■■□□ 2.87
TSPAN4-202ENST00000397396 FAM135BQ49AJ0 1406 aa32.97■■■□□ 2.87
TSPAN4-202ENST00000397396 HIRIP3Q9BW71 556 aaPredicted RBP32.95■■■□□ 2.86
TSPAN4-202ENST00000397396 STRCQ7RTU9 1775 aa32.94■■■□□ 2.86
TSPAN4-202ENST00000397396 PTCH1Q13635 1447 aa32.94■■■□□ 2.86
TSPAN4-202ENST00000397396 XRN1Q8IZH2 1706 aaKnown RBP32.92■■■□□ 2.86
TSPAN4-202ENST00000397396 PTPRUQ92729 1446 aa32.92■■■□□ 2.86
TSPAN4-202ENST00000397396 QRICH2Q9H0J4 1663 aa32.91■■■□□ 2.86
TSPAN4-202ENST00000397396 POGKQ9P215 609 aa32.91■■■□□ 2.86
TSPAN4-202ENST00000397396 AMOTL2Q9Y2J4 779 aa32.91■■■□□ 2.86
TSPAN4-202ENST00000397396 DMRT2Q9Y5R5 561 aa32.91■■■□□ 2.86
TSPAN4-202ENST00000397396 TESK2Q96S53 571 aa32.9■■■□□ 2.86
TSPAN4-202ENST00000397396 CHD2O14647 1828 aaKnown RBP32.89■■■□□ 2.86
TSPAN4-202ENST00000397396 TMF1P82094 1093 aa32.89■■■□□ 2.86
TSPAN4-202ENST00000397396 PRAM1Q96QH2 718 aa32.88■■■□□ 2.85
TSPAN4-202ENST00000397396 NWD1Q149M9 1564 aa32.87■■■□□ 2.85
TSPAN4-202ENST00000397396 CDCA8Q53HL2 280 aa32.86■■■□□ 2.85
TSPAN4-202ENST00000397396 KCNA6P17658 529 aa32.84■■■□□ 2.85
TSPAN4-202ENST00000397396 ROBO2Q9HCK4 1378 aa32.83■■■□□ 2.85
TSPAN4-202ENST00000397396 NKTRP30414 1462 aaKnown RBP32.81■■■□□ 2.84
TSPAN4-202ENST00000397396 CCDC7Q96M83 1385 aa32.8■■■□□ 2.84
TSPAN4-202ENST00000397396 EVC2Q86UK5 1308 aa32.77■■■□□ 2.84
TSPAN4-202ENST00000397396 KIF7Q2M1P5 1343 aa32.76■■■□□ 2.83
TSPAN4-202ENST00000397396 WASHC2AQ641Q2 1341 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms