RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 CDC42BPAQ5VT25 1732 aa18.93■□□□□ 0.62
CCNF-202ENST00000397066 PRKCSHP14314 528 aaPredicted RBP18.92■□□□□ 0.62
CCNF-202ENST00000397066 CHGAP10645 457 aaKnown RBP18.91■□□□□ 0.62
CCNF-202ENST00000397066 TRPM1Q7Z4N2 1603 aa18.91■□□□□ 0.62
CCNF-202ENST00000397066 CGNL1Q0VF96 1302 aa18.91■□□□□ 0.62
CCNF-202ENST00000397066 E9PCH4 1651 aa18.91■□□□□ 0.62
CCNF-202ENST00000397066 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
CCNF-202ENST00000397066 RRP7AQ9Y3A4 280 aaKnown RBP18.91■□□□□ 0.62
CCNF-202ENST00000397066 PLA2R1Q13018 1463 aa18.9■□□□□ 0.62
CCNF-202ENST00000397066 EIF3AQ14152 1382 aaKnown RBP18.89■□□□□ 0.62
CCNF-202ENST00000397066 IGHDP01880 384 aa18.89■□□□□ 0.61
CCNF-202ENST00000397066 CLUAP1Q96AJ1 413 aa18.89■□□□□ 0.61
CCNF-202ENST00000397066 EFCAB2Q5VUJ9 269 aa18.89■□□□□ 0.61
CCNF-202ENST00000397066 SYCP2Q9BX26 1530 aa18.88■□□□□ 0.61
CCNF-202ENST00000397066 SPRYD3Q8NCJ5 442 aa18.88■□□□□ 0.61
CCNF-202ENST00000397066 MAPK8IP3Q9UPT6 1336 aa18.88■□□□□ 0.61
CCNF-202ENST00000397066 BCL2L13Q9BXK5 485 aa18.87■□□□□ 0.61
CCNF-202ENST00000397066 MAGI2Q86UL8 1455 aa18.87■□□□□ 0.61
CCNF-202ENST00000397066 ARHGEF5Q12774 1597 aa18.87■□□□□ 0.61
CCNF-202ENST00000397066 MORC1Q86VD1 984 aa18.86■□□□□ 0.61
CCNF-202ENST00000397066 NKTRP30414 1462 aaKnown RBP18.86■□□□□ 0.61
CCNF-202ENST00000397066 NUP160Q12769 1436 aa18.86■□□□□ 0.61
CCNF-202ENST00000397066 PRDM15P57071 1507 aaPredicted RBP18.86■□□□□ 0.61
CCNF-202ENST00000397066 ZNF521Q96K83 1311 aa18.85■□□□□ 0.61
CCNF-202ENST00000397066 SPAG9O60271 1321 aaKnown RBP18.84■□□□□ 0.61
CCNF-202ENST00000397066 PDE3AQ14432 1141 aa18.84■□□□□ 0.61
CCNF-202ENST00000397066 EIF2AK4Q9P2K8 1649 aaKnown RBP18.84■□□□□ 0.61
CCNF-202ENST00000397066 ABCA8O94911 1581 aa18.84■□□□□ 0.61
CCNF-202ENST00000397066 PMFBP1Q8TBY8 1022 aa18.83■□□□□ 0.61
CCNF-202ENST00000397066 SAMD9LQ8IVG5 1584 aa18.83■□□□□ 0.6
CCNF-202ENST00000397066 CFAP70Q5T0N1 1121 aa18.82■□□□□ 0.6
CCNF-202ENST00000397066 SLC24A1O60721 1099 aa18.81■□□□□ 0.6
CCNF-202ENST00000397066 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
CCNF-202ENST00000397066 ASXL1Q8IXJ9 1541 aa18.81■□□□□ 0.6
CCNF-202ENST00000397066 POGKQ9P215 609 aa18.8■□□□□ 0.6
CCNF-202ENST00000397066 WDR7Q9Y4E6 1490 aa18.8■□□□□ 0.6
CCNF-202ENST00000397066 SEC24BO95487 1268 aa18.8■□□□□ 0.6
CCNF-202ENST00000397066 FTSJ3Q8IY81 847 aaKnown RBP18.8■□□□□ 0.6
CCNF-202ENST00000397066 WWC1Q8IX03 1113 aa18.8■□□□□ 0.6
CCNF-202ENST00000397066 NGEFQ8N5V2 710 aa18.79■□□□□ 0.6
CCNF-202ENST00000397066 SCAF11Q99590 1463 aaKnown RBP18.79■□□□□ 0.6
CCNF-202ENST00000397066 AFAP1Q8N556 730 aa18.79■□□□□ 0.6
CCNF-202ENST00000397066 KIF3BO15066 747 aa18.79■□□□□ 0.6
CCNF-202ENST00000397066 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
CCNF-202ENST00000397066 KANK1Q14678 1352 aa18.79■□□□□ 0.6
CCNF-202ENST00000397066 CFAP53Q96M91 514 aa18.78■□□□□ 0.6
CCNF-202ENST00000397066 PIK3C2GO75747 1445 aa18.78■□□□□ 0.6
CCNF-202ENST00000397066 GZF1Q9H116 711 aaPredicted RBP18.77■□□□□ 0.6
CCNF-202ENST00000397066 L1TD1Q5T7N2 865 aaKnown RBP18.77■□□□□ 0.6
CCNF-202ENST00000397066 STAC3Q96MF2 364 aa18.77■□□□□ 0.6
CCNF-202ENST00000397066 TRMT2AQ8IZ69 625 aaKnown RBP18.77■□□□□ 0.59
CCNF-202ENST00000397066 TCP11L2Q8N4U5 519 aa18.75■□□□□ 0.59
CCNF-202ENST00000397066 PDZRN3Q9UPQ7 1066 aa18.75■□□□□ 0.59
CCNF-202ENST00000397066 RUNDC1Q96C34 613 aa18.74■□□□□ 0.59
CCNF-202ENST00000397066 TRAK1Q9UPV9 953 aa18.74■□□□□ 0.59
CCNF-202ENST00000397066 DUOX2Q9NRD8 1548 aa18.74■□□□□ 0.59
CCNF-202ENST00000397066 MFAP1P55081 439 aaKnown RBP18.73■□□□□ 0.59
CCNF-202ENST00000397066 U2AF1L5P0DN76 240 aaPredicted RBP18.73■□□□□ 0.59
CCNF-202ENST00000397066 U2AF1Q01081 240 aaKnown RBP eCLIP18.73■□□□□ 0.59
CCNF-202ENST00000397066 FAM43AQ8N2R8 423 aa18.72■□□□□ 0.59
CCNF-202ENST00000397066 CARD14Q9BXL6 1004 aa18.72■□□□□ 0.59
CCNF-202ENST00000397066 RARSP54136 660 aaKnown RBP18.71■□□□□ 0.59
CCNF-202ENST00000397066 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
CCNF-202ENST00000397066 MYH16Q9H6N6 1097 aa18.71■□□□□ 0.59
CCNF-202ENST00000397066 NINLQ9Y2I6 1382 aa18.71■□□□□ 0.59
CCNF-202ENST00000397066 TNNQ9UQP3 1299 aa18.7■□□□□ 0.58
CCNF-202ENST00000397066 PREX2Q70Z35 1606 aa18.7■□□□□ 0.58
CCNF-202ENST00000397066 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
CCNF-202ENST00000397066 PCDHB15Q9Y5E8 787 aa18.69■□□□□ 0.58
CCNF-202ENST00000397066 LAMC1P11047 1609 aa18.69■□□□□ 0.58
CCNF-202ENST00000397066 GOLGA6L3A6NEY3 463 aa18.69■□□□□ 0.58
CCNF-202ENST00000397066 SLC12A5Q9H2X9 1139 aa18.69■□□□□ 0.58
CCNF-202ENST00000397066 U2SURPO15042 1029 aaKnown RBP18.69■□□□□ 0.58
CCNF-202ENST00000397066 MAST1Q9Y2H9 1570 aa18.68■□□□□ 0.58
CCNF-202ENST00000397066 CDC42BPBQ9Y5S2 1711 aa18.68■□□□□ 0.58
CCNF-202ENST00000397066 UNC13BO14795 1591 aa18.68■□□□□ 0.58
CCNF-202ENST00000397066 MTHFSP49914 203 aa18.68■□□□□ 0.58
CCNF-202ENST00000397066 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
CCNF-202ENST00000397066 ADGRF5Q8IZF2 1346 aa18.68■□□□□ 0.58
CCNF-202ENST00000397066 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
CCNF-202ENST00000397066 USP19O94966 1318 aa18.67■□□□□ 0.58
CCNF-202ENST00000397066 ITPRIPQ8IWB1 547 aa18.67■□□□□ 0.58
CCNF-202ENST00000397066 RLBP1P12271 317 aa18.67■□□□□ 0.58
CCNF-202ENST00000397066 TBC1D2Q9BYX2 928 aa18.67■□□□□ 0.58
CCNF-202ENST00000397066 SCAPERQ9BY12 1400 aa18.67■□□□□ 0.58
CCNF-202ENST00000397066 ZKSCAN2Q63HK3 967 aa18.66■□□□□ 0.58
CCNF-202ENST00000397066 IQGAP3Q86VI3 1631 aa18.66■□□□□ 0.58
CCNF-202ENST00000397066 AAMPQ13685 434 aa18.66■□□□□ 0.58
CCNF-202ENST00000397066 MYO5CQ9NQX4 1742 aa18.66■□□□□ 0.58
CCNF-202ENST00000397066 TTC37Q6PGP7 1564 aa18.66■□□□□ 0.58
CCNF-202ENST00000397066 HSP90AA1P07900 732 aaKnown RBP18.66■□□□□ 0.58
CCNF-202ENST00000397066 TRAPPC8Q9Y2L5 1435 aa18.65■□□□□ 0.58
CCNF-202ENST00000397066 ATP10AO60312 1499 aa18.65■□□□□ 0.58
CCNF-202ENST00000397066 HSCBQ8IWL3 235 aa18.65■□□□□ 0.58
CCNF-202ENST00000397066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.65■□□□□ 0.58
CCNF-202ENST00000397066 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
CCNF-202ENST00000397066 SYNMO15061 1565 aa18.65■□□□□ 0.58
CCNF-202ENST00000397066 TBC1D32Q96NH3 1257 aa18.64■□□□□ 0.58
CCNF-202ENST00000397066 C22orf23Q9BZE7 217 aa18.64■□□□□ 0.57
CCNF-202ENST00000397066 NSD3Q9BZ95 1437 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms