RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 RPGRIP1LQ68CZ1 1315 aa21.2■□□□□ 0.98
TM9SF1-202ENST00000396854 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
TM9SF1-202ENST00000396854 DCAF11Q8TEB1 546 aa21.19■□□□□ 0.98
TM9SF1-202ENST00000396854 STAC3Q96MF2 364 aa21.19■□□□□ 0.98
TM9SF1-202ENST00000396854 STAG3Q9UJ98 1225 aa21.17■□□□□ 0.98
TM9SF1-202ENST00000396854 ZNF326Q5BKZ1 582 aaKnown RBP21.16■□□□□ 0.98
TM9SF1-202ENST00000396854 PRAG1Q86YV5 1406 aa21.16■□□□□ 0.98
TM9SF1-202ENST00000396854 NRXN1Q9ULB1 1477 aa21.16■□□□□ 0.98
TM9SF1-202ENST00000396854 ZFYVE9O95405 1425 aa21.14■□□□□ 0.98
TM9SF1-202ENST00000396854 SLIT1O75093 1534 aa21.14■□□□□ 0.97
TM9SF1-202ENST00000396854 TRPM1Q7Z4N2 1603 aa21.14■□□□□ 0.97
TM9SF1-202ENST00000396854 KDM2AQ9Y2K7 1162 aa21.13■□□□□ 0.97
TM9SF1-202ENST00000396854 ARHGAP23Q9P227 1491 aa21.12■□□□□ 0.97
TM9SF1-202ENST00000396854 KIAA1210Q9ULL0 1709 aa21.12■□□□□ 0.97
TM9SF1-202ENST00000396854 RIMS2Q9UQ26 1411 aa21.12■□□□□ 0.97
TM9SF1-202ENST00000396854 TMEM2Q9UHN6 1383 aa21.11■□□□□ 0.97
TM9SF1-202ENST00000396854 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
TM9SF1-202ENST00000396854 PELP1Q8IZL8 1130 aaKnown RBP21.09■□□□□ 0.97
TM9SF1-202ENST00000396854 RALGAPBQ86X10 1494 aa21.09■□□□□ 0.97
TM9SF1-202ENST00000396854 PIK3C2GO75747 1445 aa21.08■□□□□ 0.97
TM9SF1-202ENST00000396854 THEMISQ8N1K5 641 aaPredicted RBP21.08■□□□□ 0.97
TM9SF1-202ENST00000396854 VGFO15240 615 aaPredicted RBP21.08■□□□□ 0.96
TM9SF1-202ENST00000396854 LAMC1P11047 1609 aa21.07■□□□□ 0.96
TM9SF1-202ENST00000396854 ADGRF5Q8IZF2 1346 aa21.07■□□□□ 0.96
TM9SF1-202ENST00000396854 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.06■□□□□ 0.96
TM9SF1-202ENST00000396854 HDGFP51858 240 aaKnown RBP21.04■□□□□ 0.96
TM9SF1-202ENST00000396854 NRXN3Q9Y4C0 1643 aa21.03■□□□□ 0.96
TM9SF1-202ENST00000396854 POLR1AO95602 1720 aaPredicted RBP21.03■□□□□ 0.96
TM9SF1-202ENST00000396854 SETBP1Q9Y6X0 1596 aa21.03■□□□□ 0.96
TM9SF1-202ENST00000396854 NUTM2DQ5VT03 806 aaPredicted RBP21.02■□□□□ 0.96
TM9SF1-202ENST00000396854 IQGAP1P46940 1657 aa21.02■□□□□ 0.96
TM9SF1-202ENST00000396854 SETD1AO15047 1707 aaKnown RBP21.02■□□□□ 0.96
TM9SF1-202ENST00000396854 SCAF11Q99590 1463 aaKnown RBP21.01■□□□□ 0.95
TM9SF1-202ENST00000396854 GPRASP1Q5JY77 1395 aa21■□□□□ 0.95
TM9SF1-202ENST00000396854 LMTK3Q96Q04 1460 aa21■□□□□ 0.95
TM9SF1-202ENST00000396854 PLEKHG1Q9ULL1 1385 aa20.98■□□□□ 0.95
TM9SF1-202ENST00000396854 LTKP29376 864 aa20.98■□□□□ 0.95
TM9SF1-202ENST00000396854 EID1Q9Y6B2 187 aa20.98■□□□□ 0.95
TM9SF1-202ENST00000396854 ALKQ9UM73 1620 aa20.98■□□□□ 0.95
TM9SF1-202ENST00000396854 ROCK2O75116 1388 aaKnown RBP20.97■□□□□ 0.95
TM9SF1-202ENST00000396854 TXNDC2Q86VQ3 553 aa20.97■□□□□ 0.95
TM9SF1-202ENST00000396854 C14orf93Q9H972 538 aaKnown RBP20.97■□□□□ 0.95
TM9SF1-202ENST00000396854 ADGRB1O14514 1584 aa20.97■□□□□ 0.95
TM9SF1-202ENST00000396854 GTF3C3Q9Y5Q9 886 aa20.97■□□□□ 0.95
TM9SF1-202ENST00000396854 MIER1Q8N108 512 aa20.95■□□□□ 0.94
TM9SF1-202ENST00000396854 CFAP70Q5T0N1 1121 aa20.95■□□□□ 0.94
TM9SF1-202ENST00000396854 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
TM9SF1-202ENST00000396854 DIP2AQ14689 1571 aa20.94■□□□□ 0.94
TM9SF1-202ENST00000396854 NBPF1Q3BBV0 1214 aa20.93■□□□□ 0.94
TM9SF1-202ENST00000396854 ANKLE2Q86XL3 938 aa20.93■□□□□ 0.94
TM9SF1-202ENST00000396854 MED14O60244 1454 aa20.93■□□□□ 0.94
TM9SF1-202ENST00000396854 ADAMTS13Q76LX8 1427 aa20.92■□□□□ 0.94
TM9SF1-202ENST00000396854 CARD11Q9BXL7 1154 aa20.9■□□□□ 0.94
TM9SF1-202ENST00000396854 STRCQ7RTU9 1775 aa20.87■□□□□ 0.93
TM9SF1-202ENST00000396854 USP47Q96K76 1375 aa20.87■□□□□ 0.93
TM9SF1-202ENST00000396854 KNDC1Q76NI1 1749 aa20.86■□□□□ 0.93
TM9SF1-202ENST00000396854 ARHGEF28Q8N1W1 1705 aaKnown RBP20.86■□□□□ 0.93
TM9SF1-202ENST00000396854 NPHP4O75161 1426 aaPredicted RBP20.86■□□□□ 0.93
TM9SF1-202ENST00000396854 EIF4G2P78344 907 aaKnown RBP eCLIP20.85■□□□□ 0.93
TM9SF1-202ENST00000396854 HSPA2P54652 639 aa20.84■□□□□ 0.93
TM9SF1-202ENST00000396854 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
TM9SF1-202ENST00000396854 YTHDC2Q9H6S0 1430 aaKnown RBP20.83■□□□□ 0.93
TM9SF1-202ENST00000396854 TMEM132EQ6IEE7 984 aa20.83■□□□□ 0.93
TM9SF1-202ENST00000396854 BCANQ96GW7 911 aa20.83■□□□□ 0.93
TM9SF1-202ENST00000396854 TBX22Q9Y458 520 aa20.83■□□□□ 0.93
TM9SF1-202ENST00000396854 METP08581 1390 aa20.83■□□□□ 0.92
TM9SF1-202ENST00000396854 NCKAP5LQ9HCH0 1330 aa20.82■□□□□ 0.92
TM9SF1-202ENST00000396854 CHD2O14647 1828 aaKnown RBP20.81■□□□□ 0.92
TM9SF1-202ENST00000396854 DLC1Q96QB1 1528 aa20.81■□□□□ 0.92
TM9SF1-202ENST00000396854 HSPA5P11021 654 aaKnown RBP20.81■□□□□ 0.92
TM9SF1-202ENST00000396854 LRPPRCP42704 1394 aaKnown RBP20.8■□□□□ 0.92
TM9SF1-202ENST00000396854 EIF3AQ14152 1382 aaKnown RBP20.8■□□□□ 0.92
TM9SF1-202ENST00000396854 YTHDC1Q96MU7 727 aaKnown RBP20.8■□□□□ 0.92
TM9SF1-202ENST00000396854 PIK3R4Q99570 1358 aa20.8■□□□□ 0.92
TM9SF1-202ENST00000396854 XRN1Q8IZH2 1706 aaKnown RBP20.8■□□□□ 0.92
TM9SF1-202ENST00000396854 SLC26A8Q96RN1 970 aa20.79■□□□□ 0.92
TM9SF1-202ENST00000396854 TECPR2O15040 1411 aa20.79■□□□□ 0.92
TM9SF1-202ENST00000396854 CPS1P31327 1500 aa20.79■□□□□ 0.92
TM9SF1-202ENST00000396854 ABCC11Q96J66 1382 aa20.77■□□□□ 0.92
TM9SF1-202ENST00000396854 QRICH2Q9H0J4 1663 aa20.77■□□□□ 0.92
TM9SF1-202ENST00000396854 PTPRUQ92729 1446 aa20.76■□□□□ 0.91
TM9SF1-202ENST00000396854 ST20-MTHFSA0A0A6YYL1 179 aa20.74■□□□□ 0.91
TM9SF1-202ENST00000396854 TRAK1Q9UPV9 953 aa20.74■□□□□ 0.91
TM9SF1-202ENST00000396854 NWD1Q149M9 1564 aa20.74■□□□□ 0.91
TM9SF1-202ENST00000396854 HIRIP3Q9BW71 556 aaPredicted RBP20.73■□□□□ 0.91
TM9SF1-202ENST00000396854 STK26Q9P289 416 aa20.72■□□□□ 0.91
TM9SF1-202ENST00000396854 SBNO2Q9Y2G9 1366 aa20.72■□□□□ 0.91
TM9SF1-202ENST00000396854 PTCH1Q13635 1447 aa20.72■□□□□ 0.91
TM9SF1-202ENST00000396854 FAM135BQ49AJ0 1406 aa20.72■□□□□ 0.91
TM9SF1-202ENST00000396854 SIRT1Q96EB6 747 aa20.71■□□□□ 0.91
TM9SF1-202ENST00000396854 CENPJQ9HC77 1338 aaPredicted RBP20.7■□□□□ 0.9
TM9SF1-202ENST00000396854 TESK2Q96S53 571 aa20.69■□□□□ 0.9
TM9SF1-202ENST00000396854 AMOTL2Q9Y2J4 779 aa20.68■□□□□ 0.9
TM9SF1-202ENST00000396854 ROBO2Q9HCK4 1378 aa20.67■□□□□ 0.9
TM9SF1-202ENST00000396854 STRCP1A6NGW2 1772 aa20.67■□□□□ 0.9
TM9SF1-202ENST00000396854 PRAM1Q96QH2 718 aa20.66■□□□□ 0.9
TM9SF1-202ENST00000396854 SLC24A1O60721 1099 aa20.65■□□□□ 0.9
TM9SF1-202ENST00000396854 NKTRP30414 1462 aaKnown RBP20.65■□□□□ 0.9
TM9SF1-202ENST00000396854 PLEKHH1Q9ULM0 1364 aa20.64■□□□□ 0.89
TM9SF1-202ENST00000396854 KCNA6P17658 529 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms