RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 GOLGA2Q08379 1002 aa31.12■■■□□ 2.57
CSNK1E-203ENST00000396832 INSRP06213 1382 aa31.11■■■□□ 2.57
CSNK1E-203ENST00000396832 BCAR3O75815 825 aa31.09■■■□□ 2.57
CSNK1E-203ENST00000396832 AMER1Q5JTC6 1135 aaPredicted RBP31.08■■■□□ 2.57
CSNK1E-203ENST00000396832 CHD1O14646 1710 aa31.08■■■□□ 2.57
CSNK1E-203ENST00000396832 WDR7Q9Y4E6 1490 aa31.07■■■□□ 2.56
CSNK1E-203ENST00000396832 APAF1O14727 1248 aa31.07■■■□□ 2.56
CSNK1E-203ENST00000396832 RSPH4AQ5TD94 716 aa31.05■■■□□ 2.56
CSNK1E-203ENST00000396832 UNC13BO14795 1591 aa31.05■■■□□ 2.56
CSNK1E-203ENST00000396832 DMRT2Q9Y5R5 561 aa31.03■■■□□ 2.56
CSNK1E-203ENST00000396832 EIF2AK4Q9P2K8 1649 aaKnown RBP31.02■■■□□ 2.56
CSNK1E-203ENST00000396832 ERCC6L2Q5T890 1561 aa31.02■■■□□ 2.56
CSNK1E-203ENST00000396832 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31■■■□□ 2.558e-8■■□□□ 12.3
CSNK1E-203ENST00000396832 IQGAP3Q86VI3 1631 aa30.99■■■□□ 2.55
CSNK1E-203ENST00000396832 ZNF521Q96K83 1311 aa30.99■■■□□ 2.55
CSNK1E-203ENST00000396832 SLFN5Q08AF3 891 aa30.99■■■□□ 2.55
CSNK1E-203ENST00000396832 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.99■■■□□ 2.55
CSNK1E-203ENST00000396832 LAMC1P11047 1609 aa30.98■■■□□ 2.55
CSNK1E-203ENST00000396832 NEUROD2Q15784 382 aa30.96■■■□□ 2.55
CSNK1E-203ENST00000396832 POGKQ9P215 609 aa30.94■■■□□ 2.54
CSNK1E-203ENST00000396832 TNNT2P45379 298 aaPredicted RBP30.94■■■□□ 2.54
CSNK1E-203ENST00000396832 IGHDP01880 384 aa30.92■■■□□ 2.54
CSNK1E-203ENST00000396832 MAST1Q9Y2H9 1570 aa30.91■■■□□ 2.54
CSNK1E-203ENST00000396832 RNF17Q9BXT8 1623 aaKnown RBP30.91■■■□□ 2.54
CSNK1E-203ENST00000396832 CANXP27824 592 aaKnown RBP30.9■■■□□ 2.54
CSNK1E-203ENST00000396832 AFAP1Q8N556 730 aa30.89■■■□□ 2.54
CSNK1E-203ENST00000396832 PANK1Q8TE04 598 aa30.89■■■□□ 2.54
CSNK1E-203ENST00000396832 COG6Q9Y2V7 657 aa30.88■■■□□ 2.53
CSNK1E-203ENST00000396832 RRP7AQ9Y3A4 280 aaKnown RBP30.88■■■□□ 2.53
CSNK1E-203ENST00000396832 ASXL1Q8IXJ9 1541 aa30.87■■■□□ 2.53
CSNK1E-203ENST00000396832 DUOX2Q9NRD8 1548 aa30.87■■■□□ 2.53
CSNK1E-203ENST00000396832 MADDQ8WXG6 1647 aa30.87■■■□□ 2.53
CSNK1E-203ENST00000396832 USP19O94966 1318 aa30.86■■■□□ 2.53
CSNK1E-203ENST00000396832 RRAGDQ9NQL2 400 aaPredicted RBP30.85■■■□□ 2.53
CSNK1E-203ENST00000396832 TRAPPC8Q9Y2L5 1435 aa30.85■■■□□ 2.53
CSNK1E-203ENST00000396832 CFAP70Q5T0N1 1121 aa30.84■■■□□ 2.53
CSNK1E-203ENST00000396832 SEC24BO95487 1268 aa30.84■■■□□ 2.53
CSNK1E-203ENST00000396832 PLXNC1O60486 1568 aa30.84■■■□□ 2.53
CSNK1E-203ENST00000396832 CDCA8Q53HL2 280 aa30.83■■■□□ 2.53
CSNK1E-203ENST00000396832 NKTRP30414 1462 aaKnown RBP30.82■■■□□ 2.52
CSNK1E-203ENST00000396832 BCL2L13Q9BXK5 485 aa30.82■■■□□ 2.52
CSNK1E-203ENST00000396832 SCAF11Q99590 1463 aaKnown RBP30.82■■■□□ 2.52
CSNK1E-203ENST00000396832 IQGAP1P46940 1657 aa30.82■■■□□ 2.52
CSNK1E-203ENST00000396832 SLKQ9H2G2 1235 aaPredicted RBP30.8■■■□□ 2.52
CSNK1E-203ENST00000396832 CARD14Q9BXL6 1004 aa30.79■■■□□ 2.52
CSNK1E-203ENST00000396832 SYNMO15061 1565 aa30.79■■■□□ 2.52
CSNK1E-203ENST00000396832 BECN1Q14457 450 aa30.79■■■□□ 2.52
CSNK1E-203ENST00000396832 L1TD1Q5T7N2 865 aaKnown RBP30.79■■■□□ 2.52
CSNK1E-203ENST00000396832 ATP10AO60312 1499 aa30.78■■■□□ 2.52
CSNK1E-203ENST00000396832 TNNQ9UQP3 1299 aa30.78■■■□□ 2.52
CSNK1E-203ENST00000396832 MYOM1P52179 1685 aa30.77■■■□□ 2.52
CSNK1E-203ENST00000396832 PIK3C2GO75747 1445 aa30.77■■■□□ 2.52
CSNK1E-203ENST00000396832 TRMT2AQ8IZ69 625 aaKnown RBP30.77■■■□□ 2.52
CSNK1E-203ENST00000396832 SPAG9O60271 1321 aaKnown RBP30.76■■■□□ 2.52
CSNK1E-203ENST00000396832 EFCAB2Q5VUJ9 269 aa30.76■■■□□ 2.51
CSNK1E-203ENST00000396832 EIF3AQ14152 1382 aaKnown RBP30.76■■■□□ 2.51
CSNK1E-203ENST00000396832 E9PSI1 815 aa30.76■■■□□ 2.51
CSNK1E-203ENST00000396832 CENPJQ9HC77 1338 aaPredicted RBP30.75■■■□□ 2.51
CSNK1E-203ENST00000396832 CLTCL1P53675 1640 aa30.73■■■□□ 2.51
CSNK1E-203ENST00000396832 CLUAP1Q96AJ1 413 aa30.72■■■□□ 2.51
CSNK1E-203ENST00000396832 ARXQ96QS3 562 aa30.72■■■□□ 2.51
CSNK1E-203ENST00000396832 ADGRF5Q8IZF2 1346 aa30.72■■■□□ 2.51
CSNK1E-203ENST00000396832 UGGT1Q9NYU2 1555 aa30.72■■■□□ 2.51
CSNK1E-203ENST00000396832 SENP3Q9H4L4 574 aaPredicted RBP30.71■■■□□ 2.51
CSNK1E-203ENST00000396832 CHGAP10645 457 aaKnown RBP30.7■■■□□ 2.5
CSNK1E-203ENST00000396832 KIF3BO15066 747 aa30.69■■■□□ 2.5
CSNK1E-203ENST00000396832 WWC1Q8IX03 1113 aa30.69■■■□□ 2.5
CSNK1E-203ENST00000396832 SPHKAPQ2M3C7 1700 aa30.69■■■□□ 2.5
CSNK1E-203ENST00000396832 ANTXR1Q9H6X2 564 aa30.68■■■□□ 2.5
CSNK1E-203ENST00000396832 SPRYD3Q8NCJ5 442 aa30.66■■■□□ 2.5
CSNK1E-203ENST00000396832 CLASP1Q7Z460 1538 aa30.66■■■□□ 2.5
CSNK1E-203ENST00000396832 KDM5AP29375 1690 aaKnown RBP30.66■■■□□ 2.5
CSNK1E-203ENST00000396832 VIRMAQ69YN4 1812 aaKnown RBP30.65■■■□□ 2.5
CSNK1E-203ENST00000396832 MAPK8IP3Q9UPT6 1336 aa30.65■■■□□ 2.5
CSNK1E-203ENST00000396832 PLCH2O75038 1416 aa30.65■■■□□ 2.5
CSNK1E-203ENST00000396832 RLBP1P12271 317 aa30.64■■■□□ 2.5
CSNK1E-203ENST00000396832 TRPM2O94759 1503 aa30.64■■■□□ 2.5
CSNK1E-203ENST00000396832 ABCC2Q92887 1545 aa30.64■■■□□ 2.5
CSNK1E-203ENST00000396832 ERVK-7P63135 1459 aa30.63■■■□□ 2.49
CSNK1E-203ENST00000396832 CGNL1Q0VF96 1302 aa30.62■■■□□ 2.49
CSNK1E-203ENST00000396832 CEP152O94986 1710 aa30.62■■■□□ 2.49
CSNK1E-203ENST00000396832 TRAK1Q9UPV9 953 aa30.62■■■□□ 2.49
CSNK1E-203ENST00000396832 XRCC6P12956 609 aaKnown RBP eCLIP30.61■■■□□ 2.49
CSNK1E-203ENST00000396832 ABCC1P33527 1531 aa30.61■■■□□ 2.49
CSNK1E-203ENST00000396832 MORC1Q86VD1 984 aa30.6■■■□□ 2.49
CSNK1E-203ENST00000396832 SLC12A5Q9H2X9 1139 aa30.6■■■□□ 2.49
CSNK1E-203ENST00000396832 PCDHB15Q9Y5E8 787 aa30.59■■■□□ 2.49
CSNK1E-203ENST00000396832 SCAPERQ9BY12 1400 aa30.59■■■□□ 2.49
CSNK1E-203ENST00000396832 NLRP1Q9C000 1473 aa30.59■■■□□ 2.49
CSNK1E-203ENST00000396832 GOLGA6L3A6NEY3 463 aa30.58■■■□□ 2.49
CSNK1E-203ENST00000396832 SHROOM2Q13796 1616 aa30.57■■■□□ 2.48
CSNK1E-203ENST00000396832 TCP11L2Q8N4U5 519 aa30.57■■■□□ 2.48
CSNK1E-203ENST00000396832 NAP1L5Q96NT1 182 aaPredicted RBP30.57■■■□□ 2.48
CSNK1E-203ENST00000396832 PDE3AQ14432 1141 aa30.56■■■□□ 2.48
CSNK1E-203ENST00000396832 GLIPR1L2Q4G1C9 344 aa30.55■■■□□ 2.48
CSNK1E-203ENST00000396832 TBC1D2Q9BYX2 928 aa30.55■■■□□ 2.48
CSNK1E-203ENST00000396832 UPF2Q9HAU5 1272 aaKnown RBP30.55■■■□□ 2.48
CSNK1E-203ENST00000396832 NSD3Q9BZ95 1437 aa30.55■■■□□ 2.48
CSNK1E-203ENST00000396832 NPC1L1Q9UHC9 1359 aa30.55■■■□□ 2.48
CSNK1E-203ENST00000396832 PNNQ9H307 717 aaKnown RBP30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms