RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 TMEM94Q12767 1356 aa25.08■■□□□ 1.61
CLTA-203ENST00000396603 PLEKHG1Q9ULL1 1385 aa25.08■■□□□ 1.61
CLTA-203ENST00000396603 TMEM131LA2VDJ0 1609 aa25.05■■□□□ 1.6
CLTA-203ENST00000396603 SLC26A8Q96RN1 970 aa25.05■■□□□ 1.6
CLTA-203ENST00000396603 IQGAP3Q86VI3 1631 aa25.04■■□□□ 1.6
CLTA-203ENST00000396603 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.03■■□□□ 1.6
CLTA-203ENST00000396603 PHF23Q9BUL5 403 aaPredicted RBP25.03■■□□□ 1.6
CLTA-203ENST00000396603 RIMS2Q9UQ26 1411 aa25.03■■□□□ 1.6
CLTA-203ENST00000396603 PROSER2Q86WR7 435 aaPredicted RBP25.01■■□□□ 1.59
CLTA-203ENST00000396603 NCOA3Q9Y6Q9 1424 aa25■■□□□ 1.59
CLTA-203ENST00000396603 E9PCH4 1651 aa25■■□□□ 1.59
CLTA-203ENST00000396603 PPP1R15AO75807 674 aaPredicted RBP24.98■■□□□ 1.59
CLTA-203ENST00000396603 TBX22Q9Y458 520 aa24.98■■□□□ 1.59
CLTA-203ENST00000396603 DIP2AQ14689 1571 aa24.97■■□□□ 1.59
CLTA-203ENST00000396603 MSH6P52701 1360 aa24.97■■□□□ 1.59
CLTA-203ENST00000396603 BCANQ96GW7 911 aa24.97■■□□□ 1.59
CLTA-203ENST00000396603 PIK3R4Q99570 1358 aa24.96■■□□□ 1.59
CLTA-203ENST00000396603 CHD2O14647 1828 aaKnown RBP24.95■■□□□ 1.58
CLTA-203ENST00000396603 NUP155O75694 1391 aa24.94■■□□□ 1.58
CLTA-203ENST00000396603 MYO5BQ9ULV0 1848 aa24.94■■□□□ 1.58
CLTA-203ENST00000396603 ROBO1Q9Y6N7 1651 aa24.93■■□□□ 1.58
CLTA-203ENST00000396603 ADAMTS13Q76LX8 1427 aa24.9■■□□□ 1.58
CLTA-203ENST00000396603 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
CLTA-203ENST00000396603 CHGAP10645 457 aaKnown RBP24.87■■□□□ 1.57
CLTA-203ENST00000396603 SLAIN2Q9P270 581 aa24.87■■□□□ 1.57
CLTA-203ENST00000396603 TRPM2O94759 1503 aa24.85■■□□□ 1.57
CLTA-203ENST00000396603 RBM33Q96EV2 1170 aaKnown RBP24.84■■□□□ 1.57
CLTA-203ENST00000396603 RRBP1Q9P2E9 1410 aaKnown RBP24.83■■□□□ 1.57
CLTA-203ENST00000396603 SPHKAPQ2M3C7 1700 aa24.81■■□□□ 1.56
CLTA-203ENST00000396603 ITGAEP38570 1179 aa24.81■■□□□ 1.56
CLTA-203ENST00000396603 RGS17Q9UGC6 210 aaPredicted RBP24.81■■□□□ 1.56
CLTA-203ENST00000396603 CADPS2Q86UW7 1296 aa24.8■■□□□ 1.56
CLTA-203ENST00000396603 C19orf44Q9H6X5 657 aa24.8■■□□□ 1.56
CLTA-203ENST00000396603 SETBP1Q9Y6X0 1596 aa24.8■■□□□ 1.56
CLTA-203ENST00000396603 JCADQ9P266 1359 aa24.79■■□□□ 1.56
CLTA-203ENST00000396603 DCCP43146 1447 aa24.78■■□□□ 1.56
CLTA-203ENST00000396603 PHLPP1O60346 1717 aa24.77■■□□□ 1.56
CLTA-203ENST00000396603 NUTM2DQ5VT03 806 aaPredicted RBP24.74■■□□□ 1.55
CLTA-203ENST00000396603 C14orf37Q86TY3 774 aa24.74■■□□□ 1.55
CLTA-203ENST00000396603 AMOTL2Q9Y2J4 779 aa24.74■■□□□ 1.55
CLTA-203ENST00000396603 COL16A1Q07092 1604 aaPredicted RBP24.74■■□□□ 1.55
CLTA-203ENST00000396603 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.74■■□□□ 1.55
CLTA-203ENST00000396603 AHDC1Q5TGY3 1603 aaPredicted RBP24.73■■□□□ 1.55
CLTA-203ENST00000396603 NRXN3Q9Y4C0 1643 aa24.73■■□□□ 1.55
CLTA-203ENST00000396603 NAIPQ13075 1403 aa24.73■■□□□ 1.55
CLTA-203ENST00000396603 ATF3P18847 181 aa24.73■■□□□ 1.55
CLTA-203ENST00000396603 XRN1Q8IZH2 1706 aaKnown RBP24.72■■□□□ 1.55
CLTA-203ENST00000396603 PTPRUQ92729 1446 aa24.72■■□□□ 1.55
CLTA-203ENST00000396603 SPATA31A6Q5VVP1 1343 aa24.7■■□□□ 1.54
CLTA-203ENST00000396603 ZNF326Q5BKZ1 582 aaKnown RBP24.68■■□□□ 1.54
CLTA-203ENST00000396603 PPARGC1BQ86YN6 1023 aaKnown RBP24.68■■□□□ 1.54
CLTA-203ENST00000396603 HFM1A2PYH4 1435 aa24.68■■□□□ 1.54
CLTA-203ENST00000396603 CLTCL1P53675 1640 aa24.68■■□□□ 1.54
CLTA-203ENST00000396603 NEXMIFQ5QGS0 1516 aa24.67■■□□□ 1.54
CLTA-203ENST00000396603 POTEAQ6S8J7 498 aa24.65■■□□□ 1.54
CLTA-203ENST00000396603 SHPRHQ149N8 1683 aa24.63■■□□□ 1.53
CLTA-203ENST00000396603 METP08581 1390 aa24.62■■□□□ 1.53
CLTA-203ENST00000396603 KIF1BO60333 1816 aa24.61■■□□□ 1.53
CLTA-203ENST00000396603 BRINP3Q76B58 766 aa24.61■■□□□ 1.53
CLTA-203ENST00000396603 ADGRL3Q9HAR2 1447 aa24.61■■□□□ 1.53
CLTA-203ENST00000396603 MST1RQ04912 1400 aa24.6■■□□□ 1.53
CLTA-203ENST00000396603 PRAG1Q86YV5 1406 aa24.6■■□□□ 1.53
CLTA-203ENST00000396603 RPGRIP1LQ68CZ1 1315 aa24.59■■□□□ 1.53
CLTA-203ENST00000396603 ASXL1Q8IXJ9 1541 aa24.58■■□□□ 1.53
CLTA-203ENST00000396603 VGFO15240 615 aaPredicted RBP24.58■■□□□ 1.53
CLTA-203ENST00000396603 PTCH1Q13635 1447 aa24.57■■□□□ 1.52
CLTA-203ENST00000396603 SETD5Q9C0A6 1442 aa24.57■■□□□ 1.52
CLTA-203ENST00000396603 LRP6O75581 1613 aa24.57■■□□□ 1.52
CLTA-203ENST00000396603 ZNF772Q68DY9 489 aaPredicted RBP24.55■■□□□ 1.52
CLTA-203ENST00000396603 NHSL1Q5SYE7 1610 aa24.54■■□□□ 1.52
CLTA-203ENST00000396603 TRIM52Q96A61 297 aa24.52■■□□□ 1.52
CLTA-203ENST00000396603 SLC4A1APQ9BWU0 796 aaKnown RBP24.52■■□□□ 1.52
CLTA-203ENST00000396603 MEX3CQ5U5Q3 659 aaKnown RBP24.51■■□□□ 1.51
CLTA-203ENST00000396603 SETD1AO15047 1707 aaKnown RBP24.5■■□□□ 1.51
CLTA-203ENST00000396603 LRRC59Q96AG4 307 aaKnown RBP24.5■■□□□ 1.51
CLTA-203ENST00000396603 NALCNQ8IZF0 1738 aa24.49■■□□□ 1.51
CLTA-203ENST00000396603 ACIN1Q9UKV3 1341 aaKnown RBP24.47■■□□□ 1.51
CLTA-203ENST00000396603 LAMC1P11047 1609 aa24.46■■□□□ 1.51
CLTA-203ENST00000396603 C1orf167Q5SNV9 1468 aa24.45■■□□□ 1.5
CLTA-203ENST00000396603 PPLO60437 1756 aa24.44■■□□□ 1.5
CLTA-203ENST00000396603 CDK12Q9NYV4 1490 aaPredicted RBP24.43■■□□□ 1.5
CLTA-203ENST00000396603 ROBO2Q9HCK4 1378 aa24.42■■□□□ 1.5
CLTA-203ENST00000396603 CCDC144AA2RUR9 1427 aa24.41■■□□□ 1.5
CLTA-203ENST00000396603 PNPLA6Q8IY17 1366 aa24.41■■□□□ 1.5
CLTA-203ENST00000396603 ANKRD30BQ9BXX2 1392 aa24.39■■□□□ 1.49
CLTA-203ENST00000396603 SOS2Q07890 1332 aaPredicted RBP24.36■■□□□ 1.49
CLTA-203ENST00000396603 TECPR2O15040 1411 aa24.36■■□□□ 1.49
CLTA-203ENST00000396603 SPATA31E1Q6ZUB1 1445 aa24.36■■□□□ 1.49
CLTA-203ENST00000396603 RXRBP28702 533 aa24.36■■□□□ 1.49
CLTA-203ENST00000396603 CDC42BPGQ6DT37 1551 aa24.36■■□□□ 1.49
CLTA-203ENST00000396603 NUTM2BA6NNL0 878 aaPredicted RBP24.35■■□□□ 1.49
CLTA-203ENST00000396603 NUTM2EB1AL46 878 aaPredicted RBP24.35■■□□□ 1.49
CLTA-203ENST00000396603 NUTM2AQ8IVF1 878 aaPredicted RBP24.35■■□□□ 1.49
CLTA-203ENST00000396603 AFF2P51816 1311 aa24.34■■□□□ 1.49
CLTA-203ENST00000396603 MPHOSPH9Q99550 1183 aa24.32■■□□□ 1.48
CLTA-203ENST00000396603 IFT172Q9UG01 1749 aa24.3■■□□□ 1.48
CLTA-203ENST00000396603 DDX17Q92841 729 aaKnown RBP24.3■■□□□ 1.48
CLTA-203ENST00000396603 LRPPRCP42704 1394 aaKnown RBP24.29■■□□□ 1.48
CLTA-203ENST00000396603 ABCC11Q96J66 1382 aa24.29■■□□□ 1.48
CLTA-203ENST00000396603 ORAI2Q96SN7 254 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms