RNA–Protein interactions for RNA: ENST00000396372.2

CALCA-203, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best) BASIC

Gene CALCA, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-203ENST00000396372 CHGAP10645 457 aaKnown RBP21.56■■□□□ 1.04
CALCA-203ENST00000396372 SLC26A8Q96RN1 970 aa21.56■■□□□ 1.04
CALCA-203ENST00000396372 RIMS2Q9UQ26 1411 aa21.55■■□□□ 1.04
CALCA-203ENST00000396372 SPHKAPQ2M3C7 1700 aa21.55■■□□□ 1.04
CALCA-203ENST00000396372 BCANQ96GW7 911 aa21.55■■□□□ 1.04
CALCA-203ENST00000396372 HSPA1LP34931 641 aa21.54■■□□□ 1.04
CALCA-203ENST00000396372 PPP1R15AO75807 674 aaPredicted RBP21.53■■□□□ 1.04
CALCA-203ENST00000396372 NAIPQ13075 1403 aa21.51■■□□□ 1.03
CALCA-203ENST00000396372 NWD1Q149M9 1564 aa21.51■■□□□ 1.03
CALCA-203ENST00000396372 PLEKHG1Q9ULL1 1385 aa21.5■■□□□ 1.03
CALCA-203ENST00000396372 KCNA6P17658 529 aa21.48■■□□□ 1.03
CALCA-203ENST00000396372 NKTRP30414 1462 aaKnown RBP21.47■■□□□ 1.03
CALCA-203ENST00000396372 NUTM2DQ5VT03 806 aaPredicted RBP21.47■■□□□ 1.03
CALCA-203ENST00000396372 TMEM94Q12767 1356 aa21.47■■□□□ 1.03
CALCA-203ENST00000396372 CHD2O14647 1828 aaKnown RBP21.46■■□□□ 1.03
CALCA-203ENST00000396372 HDGFP51858 240 aaKnown RBP21.45■■□□□ 1.02
CALCA-203ENST00000396372 PROSER2Q86WR7 435 aaPredicted RBP21.44■■□□□ 1.02
CALCA-203ENST00000396372 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.44■■□□□ 1.02
CALCA-203ENST00000396372 RBM33Q96EV2 1170 aaKnown RBP21.44■■□□□ 1.02
CALCA-203ENST00000396372 HFM1A2PYH4 1435 aa21.44■■□□□ 1.02
CALCA-203ENST00000396372 CLTCL1P53675 1640 aa21.44■■□□□ 1.02
CALCA-203ENST00000396372 MED1Q15648 1581 aaPredicted RBP21.43■■□□□ 1.02
CALCA-203ENST00000396372 DIP2AQ14689 1571 aa21.42■■□□□ 1.02
CALCA-203ENST00000396372 ILDR2Q71H61 639 aa21.42■■□□□ 1.02
CALCA-203ENST00000396372 TRPM2O94759 1503 aa21.41■■□□□ 1.02
CALCA-203ENST00000396372 ADAMTS13Q76LX8 1427 aa21.4■■□□□ 1.02
CALCA-203ENST00000396372 TRIM52Q96A61 297 aa21.39■■□□□ 1.01
CALCA-203ENST00000396372 KIF1BO60333 1816 aa21.39■■□□□ 1.01
CALCA-203ENST00000396372 ZNF326Q5BKZ1 582 aaKnown RBP21.36■■□□□ 1.01
CALCA-203ENST00000396372 TBX22Q9Y458 520 aa21.36■■□□□ 1.01
CALCA-203ENST00000396372 ROBO1Q9Y6N7 1651 aa21.36■■□□□ 1.01
CALCA-203ENST00000396372 NRXN3Q9Y4C0 1643 aa21.36■■□□□ 1.01
CALCA-203ENST00000396372 MSH6P52701 1360 aa21.36■■□□□ 1.01
CALCA-203ENST00000396372 NEXMIFQ5QGS0 1516 aa21.33■■□□□ 1
CALCA-203ENST00000396372 SETBP1Q9Y6X0 1596 aa21.32■■□□□ 1
CALCA-203ENST00000396372 FAM135BQ49AJ0 1406 aa21.31■■□□□ 1
CALCA-203ENST00000396372 SLC4A1APQ9BWU0 796 aaKnown RBP21.31■■□□□ 1
CALCA-203ENST00000396372 PIK3R4Q99570 1358 aa21.3■■□□□ 1
CALCA-203ENST00000396372 C14orf37Q86TY3 774 aa21.29■■□□□ 1
CALCA-203ENST00000396372 XRN1Q8IZH2 1706 aaKnown RBP21.29■■□□□ 1
CALCA-203ENST00000396372 PTPRUQ92729 1446 aa21.29■■□□□ 1
CALCA-203ENST00000396372 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.27■■□□□ 1
CALCA-203ENST00000396372 AMOTL2Q9Y2J4 779 aa21.25■□□□□ 0.99
CALCA-203ENST00000396372 PHLPP1O60346 1717 aa21.24■□□□□ 0.99
CALCA-203ENST00000396372 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
CALCA-203ENST00000396372 NCOA3Q9Y6Q9 1424 aa21.23■□□□□ 0.99
CALCA-203ENST00000396372 SOCS7O14512 581 aa21.23■□□□□ 0.99
CALCA-203ENST00000396372 FOXD1Q16676 465 aa21.23■□□□□ 0.99
CALCA-203ENST00000396372 SLAIN2Q9P270 581 aa21.23■□□□□ 0.99
CALCA-203ENST00000396372 PPLO60437 1756 aa21.22■□□□□ 0.99
CALCA-203ENST00000396372 METP08581 1390 aa21.22■□□□□ 0.99
CALCA-203ENST00000396372 SETD1AO15047 1707 aaKnown RBP21.19■□□□□ 0.98
CALCA-203ENST00000396372 ATF3P18847 181 aa21.18■□□□□ 0.98
CALCA-203ENST00000396372 C19orf44Q9H6X5 657 aa21.17■□□□□ 0.98
CALCA-203ENST00000396372 NALCNQ8IZF0 1738 aa21.16■□□□□ 0.98
CALCA-203ENST00000396372 CCDC144AA2RUR9 1427 aa21.16■□□□□ 0.98
CALCA-203ENST00000396372 CADPS2Q86UW7 1296 aa21.16■□□□□ 0.98
CALCA-203ENST00000396372 COL16A1Q07092 1604 aaPredicted RBP21.15■□□□□ 0.98
CALCA-203ENST00000396372 MPHOSPH9Q99550 1183 aa21.15■□□□□ 0.98
CALCA-203ENST00000396372 VGFO15240 615 aaPredicted RBP21.14■□□□□ 0.97
CALCA-203ENST00000396372 DCCP43146 1447 aa21.13■□□□□ 0.97
CALCA-203ENST00000396372 SETD5Q9C0A6 1442 aa21.12■□□□□ 0.97
CALCA-203ENST00000396372 RPGRIP1LQ68CZ1 1315 aa21.12■□□□□ 0.97
CALCA-203ENST00000396372 IFT172Q9UG01 1749 aa21.12■□□□□ 0.97
CALCA-203ENST00000396372 AHDC1Q5TGY3 1603 aaPredicted RBP21.11■□□□□ 0.97
CALCA-203ENST00000396372 ADGRL3Q9HAR2 1447 aa21.11■□□□□ 0.97
CALCA-203ENST00000396372 JCADQ9P266 1359 aa21.09■□□□□ 0.97
CALCA-203ENST00000396372 MST1RQ04912 1400 aa21.08■□□□□ 0.97
CALCA-203ENST00000396372 PTCH1Q13635 1447 aa21.08■□□□□ 0.97
CALCA-203ENST00000396372 RGL3Q3MIN7 710 aa21.08■□□□□ 0.97
CALCA-203ENST00000396372 SPATA31E1Q6ZUB1 1445 aa21.08■□□□□ 0.97
CALCA-203ENST00000396372 ASXL1Q8IXJ9 1541 aa21.08■□□□□ 0.96
CALCA-203ENST00000396372 RAB3GAP2Q9H2M9 1393 aa21.07■□□□□ 0.96
CALCA-203ENST00000396372 BRINP3Q76B58 766 aa21.06■□□□□ 0.96
CALCA-203ENST00000396372 ROBO2Q9HCK4 1378 aa21.06■□□□□ 0.96
CALCA-203ENST00000396372 ADGRF5Q8IZF2 1346 aa21.04■□□□□ 0.96
CALCA-203ENST00000396372 NHSL1Q5SYE7 1610 aa21.04■□□□□ 0.96
CALCA-203ENST00000396372 RGS17Q9UGC6 210 aaPredicted RBP21.04■□□□□ 0.96
CALCA-203ENST00000396372 SHPRHQ149N8 1683 aa21.04■□□□□ 0.96
CALCA-203ENST00000396372 PRAG1Q86YV5 1406 aa21.02■□□□□ 0.96
CALCA-203ENST00000396372 ACIN1Q9UKV3 1341 aaKnown RBP21.02■□□□□ 0.95
CALCA-203ENST00000396372 ANKRD30BQ9BXX2 1392 aa21.01■□□□□ 0.95
CALCA-203ENST00000396372 LRP6O75581 1613 aa21■□□□□ 0.95
CALCA-203ENST00000396372 PIK3C2GO75747 1445 aa20.98■□□□□ 0.95
CALCA-203ENST00000396372 KNDC1Q76NI1 1749 aa20.97■□□□□ 0.95
CALCA-203ENST00000396372 C1orf167Q5SNV9 1468 aa20.96■□□□□ 0.95
CALCA-203ENST00000396372 STK26Q9P289 416 aa20.96■□□□□ 0.95
CALCA-203ENST00000396372 SPATA31A6Q5VVP1 1343 aa20.96■□□□□ 0.95
CALCA-203ENST00000396372 DDX17Q92841 729 aaKnown RBP20.95■□□□□ 0.94
CALCA-203ENST00000396372 CDC42BPGQ6DT37 1551 aa20.94■□□□□ 0.94
CALCA-203ENST00000396372 MEX3CQ5U5Q3 659 aaKnown RBP20.94■□□□□ 0.94
CALCA-203ENST00000396372 POTEAQ6S8J7 498 aa20.94■□□□□ 0.94
CALCA-203ENST00000396372 LRPPRCP42704 1394 aaKnown RBP20.93■□□□□ 0.94
CALCA-203ENST00000396372 LAMC1P11047 1609 aa20.93■□□□□ 0.94
CALCA-203ENST00000396372 TMEM132EQ6IEE7 984 aa20.92■□□□□ 0.94
CALCA-203ENST00000396372 TECPR2O15040 1411 aa20.92■□□□□ 0.94
CALCA-203ENST00000396372 MYOM2P54296 1465 aa20.92■□□□□ 0.94
CALCA-203ENST00000396372 NUTM2BA6NNL0 878 aaPredicted RBP20.91■□□□□ 0.94
CALCA-203ENST00000396372 NUTM2EB1AL46 878 aaPredicted RBP20.91■□□□□ 0.94
CALCA-203ENST00000396372 NUTM2AQ8IVF1 878 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms