RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 HSPA1LP34931 641 aa27.79■■■□□ 2.04
FXN-203ENST00000396366 BCANQ96GW7 911 aa27.79■■■□□ 2.04
FXN-203ENST00000396366 ZFYVE9O95405 1425 aa27.78■■■□□ 2.04
FXN-203ENST00000396366 RIMS2Q9UQ26 1411 aa27.77■■■□□ 2.04
FXN-203ENST00000396366 NAIPQ13075 1403 aa27.76■■■□□ 2.04
FXN-203ENST00000396366 XIRP1Q702N8 1843 aaKnown RBP27.76■■■□□ 2.04
FXN-203ENST00000396366 NUTM2DQ5VT03 806 aaPredicted RBP27.76■■■□□ 2.03
FXN-203ENST00000396366 KCNA6P17658 529 aa27.74■■■□□ 2.03
FXN-203ENST00000396366 PPP1R15AO75807 674 aaPredicted RBP27.73■■■□□ 2.03
FXN-203ENST00000396366 RBM33Q96EV2 1170 aaKnown RBP27.73■■■□□ 2.03
FXN-203ENST00000396366 PLEKHG1Q9ULL1 1385 aa27.71■■■□□ 2.03
FXN-203ENST00000396366 HDGFP51858 240 aaKnown RBP27.7■■■□□ 2.02
FXN-203ENST00000396366 TMEM94Q12767 1356 aa27.68■■■□□ 2.02
FXN-203ENST00000396366 ILDR2Q71H61 639 aa27.67■■■□□ 2.02
FXN-203ENST00000396366 PROSER2Q86WR7 435 aaPredicted RBP27.67■■■□□ 2.02
FXN-203ENST00000396366 SPHKAPQ2M3C7 1700 aa27.67■■■□□ 2.02
FXN-203ENST00000396366 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.66■■■□□ 2.02
FXN-203ENST00000396366 HFM1A2PYH4 1435 aa27.64■■■□□ 2.02
FXN-203ENST00000396366 TRIM52Q96A61 297 aa27.63■■■□□ 2.01
FXN-203ENST00000396366 NWD1Q149M9 1564 aa27.62■■■□□ 2.01
FXN-203ENST00000396366 TBX22Q9Y458 520 aa27.62■■■□□ 2.01
FXN-203ENST00000396366 CHD2O14647 1828 aaKnown RBP27.61■■■□□ 2.01
FXN-203ENST00000396366 ADAMTS13Q76LX8 1427 aa27.6■■■□□ 2.01
FXN-203ENST00000396366 NKTRP30414 1462 aaKnown RBP27.57■■■□□ 2
FXN-203ENST00000396366 CLTCL1P53675 1640 aa27.57■■■□□ 2
FXN-203ENST00000396366 ZNF326Q5BKZ1 582 aaKnown RBP27.57■■■□□ 2
FXN-203ENST00000396366 TRPM2O94759 1503 aa27.53■■■□□ 2
FXN-203ENST00000396366 SLC4A1APQ9BWU0 796 aaKnown RBP27.52■■■□□ 2
FXN-203ENST00000396366 FOXD1Q16676 465 aa27.49■■□□□ 1.99
FXN-203ENST00000396366 NRXN3Q9Y4C0 1643 aa27.49■■□□□ 1.99
FXN-203ENST00000396366 DIP2AQ14689 1571 aa27.48■■□□□ 1.99
FXN-203ENST00000396366 MED1Q15648 1581 aaPredicted RBP27.48■■□□□ 1.99
FXN-203ENST00000396366 FAM135BQ49AJ0 1406 aa27.48■■□□□ 1.99
FXN-203ENST00000396366 PTPRUQ92729 1446 aa27.48■■□□□ 1.99
FXN-203ENST00000396366 KIF1BO60333 1816 aa27.47■■□□□ 1.99
FXN-203ENST00000396366 AMOTL2Q9Y2J4 779 aa27.47■■□□□ 1.99
FXN-203ENST00000396366 MSH6P52701 1360 aa27.47■■□□□ 1.99
FXN-203ENST00000396366 NEXMIFQ5QGS0 1516 aa27.45■■□□□ 1.98
FXN-203ENST00000396366 PIK3R4Q99570 1358 aa27.45■■□□□ 1.98
FXN-203ENST00000396366 ROBO1Q9Y6N7 1651 aa27.44■■□□□ 1.98
FXN-203ENST00000396366 SLAIN2Q9P270 581 aa27.43■■□□□ 1.98
FXN-203ENST00000396366 SETBP1Q9Y6X0 1596 aa27.43■■□□□ 1.98
FXN-203ENST00000396366 C14orf37Q86TY3 774 aa27.42■■□□□ 1.98
FXN-203ENST00000396366 METP08581 1390 aa27.41■■□□□ 1.98
FXN-203ENST00000396366 MPHOSPH9Q99550 1183 aa27.37■■□□□ 1.97
FXN-203ENST00000396366 NCOA3Q9Y6Q9 1424 aa27.37■■□□□ 1.97
FXN-203ENST00000396366 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.36■■□□□ 1.97
FXN-203ENST00000396366 SOCS7O14512 581 aa27.35■■□□□ 1.97
FXN-203ENST00000396366 C19orf44Q9H6X5 657 aa27.35■■□□□ 1.97
FXN-203ENST00000396366 XRN1Q8IZH2 1706 aaKnown RBP27.34■■□□□ 1.97
FXN-203ENST00000396366 VGFO15240 615 aaPredicted RBP27.31■■□□□ 1.96
FXN-203ENST00000396366 ATF3P18847 181 aa27.31■■□□□ 1.96
FXN-203ENST00000396366 PHF23Q9BUL5 403 aaPredicted RBP27.3■■□□□ 1.96
FXN-203ENST00000396366 SETD5Q9C0A6 1442 aa27.3■■□□□ 1.96
FXN-203ENST00000396366 CADPS2Q86UW7 1296 aa27.29■■□□□ 1.96
FXN-203ENST00000396366 RPGRIP1LQ68CZ1 1315 aa27.29■■□□□ 1.96
FXN-203ENST00000396366 PPLO60437 1756 aa27.27■■□□□ 1.96
FXN-203ENST00000396366 PHLPP1O60346 1717 aa27.27■■□□□ 1.96
FXN-203ENST00000396366 RGL3Q3MIN7 710 aa27.26■■□□□ 1.95
FXN-203ENST00000396366 CCDC144AA2RUR9 1427 aa27.25■■□□□ 1.95
FXN-203ENST00000396366 SETD1AO15047 1707 aaKnown RBP27.24■■□□□ 1.95
FXN-203ENST00000396366 RGS17Q9UGC6 210 aaPredicted RBP27.22■■□□□ 1.95
FXN-203ENST00000396366 SPATA31E1Q6ZUB1 1445 aa27.21■■□□□ 1.95
FXN-203ENST00000396366 RAB3GAP2Q9H2M9 1393 aa27.21■■□□□ 1.95
FXN-203ENST00000396366 ADGRF5Q8IZF2 1346 aa27.2■■□□□ 1.95
FXN-203ENST00000396366 BRINP3Q76B58 766 aa27.19■■□□□ 1.94
FXN-203ENST00000396366 COL16A1Q07092 1604 aaPredicted RBP27.18■■□□□ 1.94
FXN-203ENST00000396366 ROBO2Q9HCK4 1378 aa27.17■■□□□ 1.94
FXN-203ENST00000396366 DCCP43146 1447 aa27.16■■□□□ 1.94
FXN-203ENST00000396366 MST1RQ04912 1400 aa27.16■■□□□ 1.94
FXN-203ENST00000396366 NALCNQ8IZF0 1738 aa27.16■■□□□ 1.94
FXN-203ENST00000396366 ADGRL3Q9HAR2 1447 aa27.16■■□□□ 1.94
FXN-203ENST00000396366 JCADQ9P266 1359 aa27.15■■□□□ 1.94
FXN-203ENST00000396366 IFT172Q9UG01 1749 aa27.13■■□□□ 1.93
FXN-203ENST00000396366 ACIN1Q9UKV3 1341 aaKnown RBP27.13■■□□□ 1.93
FXN-203ENST00000396366 AHDC1Q5TGY3 1603 aaPredicted RBP27.12■■□□□ 1.93
FXN-203ENST00000396366 PTCH1Q13635 1447 aa27.11■■□□□ 1.93
FXN-203ENST00000396366 ASXL1Q8IXJ9 1541 aa27.1■■□□□ 1.93
FXN-203ENST00000396366 ANKRD30BQ9BXX2 1392 aa27.09■■□□□ 1.93
FXN-203ENST00000396366 DDX17Q92841 729 aaKnown RBP27.09■■□□□ 1.93
FXN-203ENST00000396366 TMEM132EQ6IEE7 984 aa27.07■■□□□ 1.92
FXN-203ENST00000396366 STK26Q9P289 416 aa27.07■■□□□ 1.92
FXN-203ENST00000396366 POTEAQ6S8J7 498 aa27.06■■□□□ 1.92
FXN-203ENST00000396366 PRAG1Q86YV5 1406 aa27.06■■□□□ 1.92
FXN-203ENST00000396366 LRP6O75581 1613 aa27.03■■□□□ 1.92
FXN-203ENST00000396366 PIK3C2GO75747 1445 aa27.03■■□□□ 1.92
FXN-203ENST00000396366 C1orf167Q5SNV9 1468 aa27.03■■□□□ 1.92
FXN-203ENST00000396366 NHSL1Q5SYE7 1610 aa27.02■■□□□ 1.92
FXN-203ENST00000396366 WAPLQ7Z5K2 1190 aa27.02■■□□□ 1.92
FXN-203ENST00000396366 ORAI2Q96SN7 254 aa27.01■■□□□ 1.91
FXN-203ENST00000396366 SPATA31A6Q5VVP1 1343 aa27■■□□□ 1.91
FXN-203ENST00000396366 SHPRHQ149N8 1683 aa27■■□□□ 1.91
FXN-203ENST00000396366 LRPPRCP42704 1394 aaKnown RBP26.98■■□□□ 1.91
FXN-203ENST00000396366 NUTM2BA6NNL0 878 aaPredicted RBP26.97■■□□□ 1.91
FXN-203ENST00000396366 NUTM2EB1AL46 878 aaPredicted RBP26.97■■□□□ 1.91
FXN-203ENST00000396366 CFAP70Q5T0N1 1121 aa26.97■■□□□ 1.91
FXN-203ENST00000396366 NUTM2AQ8IVF1 878 aaPredicted RBP26.97■■□□□ 1.91
FXN-203ENST00000396366 C14orf93Q9H972 538 aaKnown RBP26.97■■□□□ 1.91
FXN-203ENST00000396366 PLEKHH1Q9ULM0 1364 aa26.97■■□□□ 1.91
FXN-203ENST00000396366 HRCP23327 699 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms