RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 RUNDC1Q96C34 613 aa21.3■■□□□ 1
UBFD1-201ENST00000395878 RIPK4P57078 832 aa21.3■■□□□ 1
UBFD1-201ENST00000395878 CREBRFQ8IUR6 639 aa21.29■■□□□ 1
UBFD1-201ENST00000395878 IGF1RP08069 1367 aa21.29■■□□□ 1
UBFD1-201ENST00000395878 GOLGA6L19H0YKK7 550 aa21.28■■□□□ 1
UBFD1-201ENST00000395878 ZKSCAN1P17029 563 aaPredicted RBP21.27■■□□□ 1
UBFD1-201ENST00000395878 C9orf78Q9NZ63 289 aaPredicted RBP21.27■■□□□ 1
UBFD1-201ENST00000395878 KIF7Q2M1P5 1343 aa21.27■□□□□ 0.99
UBFD1-201ENST00000395878 AAMPQ13685 434 aa21.26■□□□□ 0.99
UBFD1-201ENST00000395878 MARCH6O60337 910 aa21.26■□□□□ 0.99
UBFD1-201ENST00000395878 TTC5Q8N0Z6 440 aa21.26■□□□□ 0.99
UBFD1-201ENST00000395878 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
UBFD1-201ENST00000395878 CPLX2Q6PUV4 134 aaKnown RBP21.26■□□□□ 0.99
UBFD1-201ENST00000395878 BECN2A8MW95 431 aa21.25■□□□□ 0.99
UBFD1-201ENST00000395878 MIA2Q96PC5 1412 aa21.25■□□□□ 0.99
UBFD1-201ENST00000395878 AKAP17AQ02040 695 aaKnown RBP21.25■□□□□ 0.99
UBFD1-201ENST00000395878 NCBP3Q53F19 620 aaKnown RBP21.25■□□□□ 0.99
UBFD1-201ENST00000395878 CNTLNQ9NXG0 1405 aa21.25■□□□□ 0.99
UBFD1-201ENST00000395878 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
UBFD1-201ENST00000395878 SYNE3Q6ZMZ3 975 aa21.24■□□□□ 0.99
UBFD1-201ENST00000395878 CHMP5Q9NZZ3 219 aa21.24■□□□□ 0.99
UBFD1-201ENST00000395878 EIF2S2P20042 333 aaKnown RBP21.24■□□□□ 0.99
UBFD1-201ENST00000395878 GNAI1P63096 354 aa21.23■□□□□ 0.99
UBFD1-201ENST00000395878 TPD52L1Q16890 204 aaPredicted RBP21.23■□□□□ 0.99
UBFD1-201ENST00000395878 IFIT2P09913 472 aaKnown RBP21.22■□□□□ 0.99
UBFD1-201ENST00000395878 DDX58O95786 925 aaKnown RBP21.22■□□□□ 0.99
UBFD1-201ENST00000395878 RSPH6AQ9H0K4 717 aa21.21■□□□□ 0.99
UBFD1-201ENST00000395878 TSR1Q2NL82 804 aaKnown RBP21.21■□□□□ 0.99
UBFD1-201ENST00000395878 A0A0U1RQG5 324 aaPredicted RBP21.21■□□□□ 0.99
UBFD1-201ENST00000395878 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.2■□□□□ 0.98
UBFD1-201ENST00000395878 FOXD4L6Q3SYB3 417 aaPredicted RBP21.2■□□□□ 0.98
UBFD1-201ENST00000395878 FOXD4L3Q6VB84 417 aaPredicted RBP21.2■□□□□ 0.98
UBFD1-201ENST00000395878 CEP89Q96ST8 783 aa21.2■□□□□ 0.98
UBFD1-201ENST00000395878 TNNT3P45378 269 aaPredicted RBP21.19■□□□□ 0.98
UBFD1-201ENST00000395878 MCTP1Q6DN14 999 aa21.19■□□□□ 0.98
UBFD1-201ENST00000395878 RNF20Q5VTR2 975 aa21.19■□□□□ 0.98
UBFD1-201ENST00000395878 FKBP5Q13451 457 aaPredicted RBP21.19■□□□□ 0.98
UBFD1-201ENST00000395878 INTS3Q68E01 1043 aaKnown RBP21.19■□□□□ 0.98
UBFD1-201ENST00000395878 ANO2Q9NQ90 1003 aa21.19■□□□□ 0.98
UBFD1-201ENST00000395878 LRRC9Q6ZRR7 1453 aa21.18■□□□□ 0.98
UBFD1-201ENST00000395878 TPM1P09493 284 aa21.18■□□□□ 0.98
UBFD1-201ENST00000395878 PES1O00541 588 aaKnown RBP21.18■□□□□ 0.98
UBFD1-201ENST00000395878 AMER1Q5JTC6 1135 aaPredicted RBP21.18■□□□□ 0.98
UBFD1-201ENST00000395878 EVA1CP58658 441 aa21.17■□□□□ 0.98
UBFD1-201ENST00000395878 HSP90AB4PQ58FF6 505 aa21.17■□□□□ 0.98
UBFD1-201ENST00000395878 ANKRD50Q9ULJ7 1429 aa21.17■□□□□ 0.98
UBFD1-201ENST00000395878 BRD4O60885 1362 aaPredicted RBP21.17■□□□□ 0.98
UBFD1-201ENST00000395878 KIF21BO75037 1637 aa21.17■□□□□ 0.98
UBFD1-201ENST00000395878 VPS53Q5VIR6 699 aa21.17■□□□□ 0.98
UBFD1-201ENST00000395878 G3BP1Q13283 466 aaKnown RBP eCLIP21.16■□□□□ 0.98
UBFD1-201ENST00000395878 TRIM29Q14134 588 aa21.16■□□□□ 0.98
UBFD1-201ENST00000395878 TPM2P07951 284 aa21.16■□□□□ 0.98
UBFD1-201ENST00000395878 ZNF644Q9H582 1327 aaPredicted RBP21.16■□□□□ 0.98
UBFD1-201ENST00000395878 FYCO1Q9BQS8 1478 aa21.15■□□□□ 0.98
UBFD1-201ENST00000395878 NUCB2P80303 420 aa21.15■□□□□ 0.98
UBFD1-201ENST00000395878 HSP90AA2PQ14568 343 aaPredicted RBP21.15■□□□□ 0.98
UBFD1-201ENST00000395878 CPLX1O14810 134 aa21.14■□□□□ 0.97
UBFD1-201ENST00000395878 TSPYL4Q9UJ04 414 aa21.13■□□□□ 0.97
UBFD1-201ENST00000395878 AMOTL1Q8IY63 956 aa21.13■□□□□ 0.97
UBFD1-201ENST00000395878 NECTIN2Q92692 538 aa21.13■□□□□ 0.97
UBFD1-201ENST00000395878 CASKIN1Q8WXD9 1431 aa21.13■□□□□ 0.97
UBFD1-201ENST00000395878 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
UBFD1-201ENST00000395878 ERC2O15083 957 aa21.12■□□□□ 0.97
UBFD1-201ENST00000395878 PSME1Q06323 249 aa21.12■□□□□ 0.97
UBFD1-201ENST00000395878 C22orf23Q9BZE7 217 aa21.12■□□□□ 0.97
UBFD1-201ENST00000395878 NOL10Q9BSC4 688 aaKnown RBP21.11■□□□□ 0.97
UBFD1-201ENST00000395878 LNPKQ9C0E8 428 aa21.11■□□□□ 0.97
UBFD1-201ENST00000395878 NCOA2Q15596 1464 aa21.11■□□□□ 0.97
UBFD1-201ENST00000395878 TRDNQ13061 729 aa21.11■□□□□ 0.97
UBFD1-201ENST00000395878 SMC3Q9UQE7 1217 aa21.1■□□□□ 0.97
UBFD1-201ENST00000395878 BICD2Q8TD16 824 aa21.09■□□□□ 0.97
UBFD1-201ENST00000395878 APPP05067 770 aa21.09■□□□□ 0.97
UBFD1-201ENST00000395878 HMOX1P09601 288 aa21.08■□□□□ 0.96
UBFD1-201ENST00000395878 OSCARQ8IYS5 282 aa21.08■□□□□ 0.96
UBFD1-201ENST00000395878 CCDC47Q96A33 483 aaKnown RBP21.08■□□□□ 0.96
UBFD1-201ENST00000395878 GGNBP2Q9H3C7 697 aa21.08■□□□□ 0.96
UBFD1-201ENST00000395878 HOOK1Q9UJC3 728 aaKnown RBP21.08■□□□□ 0.96
UBFD1-201ENST00000395878 WASHC2AQ641Q2 1341 aa21.08■□□□□ 0.96
UBFD1-201ENST00000395878 PDE4CQ08493 712 aa21.08■□□□□ 0.96
UBFD1-201ENST00000395878 PANK1Q8TE04 598 aa21.08■□□□□ 0.96
UBFD1-201ENST00000395878 CDC45O75419 566 aa21.07■□□□□ 0.96
UBFD1-201ENST00000395878 ANKRD20A12PQ8NF67 263 aa21.07■□□□□ 0.96
UBFD1-201ENST00000395878 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
UBFD1-201ENST00000395878 CCDC70Q6NSX1 233 aa21.07■□□□□ 0.96
UBFD1-201ENST00000395878 CCAR2Q8N163 923 aaKnown RBP21.07■□□□□ 0.96
UBFD1-201ENST00000395878 ADAMTS8Q9UP79 889 aa21.06■□□□□ 0.96
UBFD1-201ENST00000395878 VPS37CA5D8V6 355 aaPredicted RBP21.06■□□□□ 0.96
UBFD1-201ENST00000395878 GPS2Q13227 327 aa21.06■□□□□ 0.96
UBFD1-201ENST00000395878 IPO7O95373 1038 aaKnown RBP21.05■□□□□ 0.96
UBFD1-201ENST00000395878 RRBP1Q9P2E9 1410 aaKnown RBP21.05■□□□□ 0.96
UBFD1-201ENST00000395878 RAPGEF4Q8WZA2 1011 aa21.03■□□□□ 0.96
UBFD1-201ENST00000395878 CABP2Q9NPB3 220 aa21.03■□□□□ 0.96
UBFD1-201ENST00000395878 UBTFL1P0CB47 393 aaPredicted RBP21.02■□□□□ 0.96
UBFD1-201ENST00000395878 MTHFSP49914 203 aa21.02■□□□□ 0.96
UBFD1-201ENST00000395878 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
UBFD1-201ENST00000395878 VPS37DQ86XT2 251 aa21.02■□□□□ 0.96
UBFD1-201ENST00000395878 ZNF592Q92610 1267 aa21.02■□□□□ 0.96
UBFD1-201ENST00000395878 ERICH2A1L162 156 aa21.01■□□□□ 0.95
UBFD1-201ENST00000395878 SASS6Q6UVJ0 657 aa21.01■□□□□ 0.95
UBFD1-201ENST00000395878 NFXL1Q6ZNB6 911 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms