RNA–Protein interactions for RNA: ENST00000395713.6

TRPS1-202, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-202ENST00000395713 GOPCQ9HD26 462 aa9.57□□□□□ -0.88
TRPS1-202ENST00000395713 CD46P15529 392 aa9.56□□□□□ -0.88
TRPS1-202ENST00000395713 SULF1Q8IWU6 871 aa9.56□□□□□ -0.88
TRPS1-202ENST00000395713 PCDH10Q9P2E7 1040 aa9.56□□□□□ -0.88
TRPS1-202ENST00000395713 SH3D19Q5HYK7 790 aa9.55□□□□□ -0.88
TRPS1-202ENST00000395713 SWT1Q5T5J6 900 aaKnown RBP9.55□□□□□ -0.88
TRPS1-202ENST00000395713 PCMTD1Q96MG8 357 aaPredicted RBP9.55□□□□□ -0.88
TRPS1-202ENST00000395713 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
TRPS1-202ENST00000395713 BHMG1C9JSJ3 638 aaPredicted RBP9.54□□□□□ -0.88
TRPS1-202ENST00000395713 SKIV2LQ15477 1246 aaKnown RBP9.54□□□□□ -0.88
TRPS1-202ENST00000395713 TK2O00142 265 aa9.53□□□□□ -0.88
TRPS1-202ENST00000395713 LSM11P83369 360 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRPS1-202ENST00000395713 FAM98CQ17RN3 349 aaKnown RBP9.53□□□□□ -0.88
TRPS1-202ENST00000395713 RDH13Q8NBN7 331 aa9.53□□□□□ -0.88
TRPS1-202ENST00000395713 TBC1D2Q9BYX2 928 aa9.53□□□□□ -0.88
TRPS1-202ENST00000395713 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
TRPS1-202ENST00000395713 MYSM1Q5VVJ2 828 aa9.52□□□□□ -0.89
TRPS1-202ENST00000395713 HDGFP51858 240 aaKnown RBP9.51□□□□□ -0.89
TRPS1-202ENST00000395713 ADGRD1Q6QNK2 874 aa9.51□□□□□ -0.89
TRPS1-202ENST00000395713 C14orf37Q86TY3 774 aa9.51□□□□□ -0.89
TRPS1-202ENST00000395713 LAPTM4BQ86VI4 370 aa9.51□□□□□ -0.89
TRPS1-202ENST00000395713 PROCA1Q8NCQ7 364 aaPredicted RBP9.51□□□□□ -0.89
TRPS1-202ENST00000395713 SPIRE2Q8WWL2 714 aa9.51□□□□□ -0.89
TRPS1-202ENST00000395713 NBPF3Q9H094 633 aa9.51□□□□□ -0.89
TRPS1-202ENST00000395713 DIXDC1Q155Q3 683 aa9.5□□□□□ -0.89
TRPS1-202ENST00000395713 ERICH6Q7L0X2 663 aa9.5□□□□□ -0.89
TRPS1-202ENST00000395713 SAMD7Q7Z3H4 446 aa9.5□□□□□ -0.89
TRPS1-202ENST00000395713 ATP1B4Q9UN42 357 aaPredicted RBP9.5□□□□□ -0.89
TRPS1-202ENST00000395713 SLC10A3P09131 477 aa9.49□□□□□ -0.89
TRPS1-202ENST00000395713 NUTM1Q86Y26 1132 aa9.49□□□□□ -0.89
TRPS1-202ENST00000395713 MRPL50Q8N5N7 158 aaKnown RBP9.49□□□□□ -0.89
TRPS1-202ENST00000395713 ANKRD13DQ6ZTN6 518 aa9.48□□□□□ -0.89
TRPS1-202ENST00000395713 ZFRQ96KR1 1074 aaKnown RBP9.48□□□□□ -0.89
TRPS1-202ENST00000395713 HRO43593 1189 aa9.47□□□□□ -0.89
TRPS1-202ENST00000395713 GCGRP47871 477 aa9.47□□□□□ -0.89
TRPS1-202ENST00000395713 CLK2P49760 499 aaKnown RBP9.47□□□□□ -0.89
TRPS1-202ENST00000395713 RSPH4AQ5TD94 716 aa9.47□□□□□ -0.89
TRPS1-202ENST00000395713 RIC3Q7Z5B4 369 aa9.46□□□□□ -0.9
TRPS1-202ENST00000395713 SLF2Q8IX21 1173 aa9.46□□□□□ -0.9
TRPS1-202ENST00000395713 MOXD2PA6NHM9 499 aa9.45□□□□□ -0.9
TRPS1-202ENST00000395713 LIMD1Q9UGP4 676 aa9.45□□□□□ -0.9
TRPS1-202ENST00000395713 RNF40O75150 1001 aa9.44□□□□□ -0.9
TRPS1-202ENST00000395713 KDM4AO75164 1064 aa9.44□□□□□ -0.9
TRPS1-202ENST00000395713 NDUFV2P19404 249 aa9.44□□□□□ -0.9
TRPS1-202ENST00000395713 SLC4A3P48751 1232 aa9.44□□□□□ -0.9
TRPS1-202ENST00000395713 STAC3Q96MF2 364 aa9.44□□□□□ -0.9
TRPS1-202ENST00000395713 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRPS1-202ENST00000395713 SPTLC1O15269 473 aa9.43□□□□□ -0.9
TRPS1-202ENST00000395713 RSBN1LQ6PCB5 846 aaPredicted RBP9.43□□□□□ -0.9
TRPS1-202ENST00000395713 CDAN1Q8IWY9 1227 aa9.42□□□□□ -0.9
TRPS1-202ENST00000395713 CSPP1Q1MSJ5 1256 aa9.41□□□□□ -0.9
TRPS1-202ENST00000395713 FBXO31Q5XUX0 539 aaPredicted RBP9.41□□□□□ -0.9
TRPS1-202ENST00000395713 LRCH3Q96II8 777 aa9.41□□□□□ -0.9
TRPS1-202ENST00000395713 KRTAP3-3Q9BYR6 98 aa9.41□□□□□ -0.9
TRPS1-202ENST00000395713 KRTAP3-2Q9BYR7 98 aa9.41□□□□□ -0.9
TRPS1-202ENST00000395713 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.9
TRPS1-202ENST00000395713 CFHP08603 1231 aa9.4□□□□□ -0.9
TRPS1-202ENST00000395713 USP46P62068 366 aa9.4□□□□□ -0.9
TRPS1-202ENST00000395713 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.4□□□□□ -0.9
TRPS1-202ENST00000395713 HOXA2O43364 376 aa9.39□□□□□ -0.91
TRPS1-202ENST00000395713 TUSC1Q2TAM9 212 aa9.39□□□□□ -0.91
TRPS1-202ENST00000395713 HLA-CQ95604 372 aa9.39□□□□□ -0.91
TRPS1-202ENST00000395713 PCDHB15Q9Y5E8 787 aa9.39□□□□□ -0.91
TRPS1-202ENST00000395713 GJA5P36382 358 aa9.38□□□□□ -0.91
TRPS1-202ENST00000395713 RFC5P40937 340 aa9.37□□□□□ -0.91
TRPS1-202ENST00000395713 GUCA2AQ02747 115 aa9.37□□□□□ -0.91
TRPS1-202ENST00000395713 FUT2Q10981 343 aa9.37□□□□□ -0.91
TRPS1-202ENST00000395713 FLIIQ13045 1269 aa9.37□□□□□ -0.91
TRPS1-202ENST00000395713 QPCTQ16769 361 aa9.37□□□□□ -0.91
TRPS1-202ENST00000395713 ANKK1Q8NFD2 765 aa9.37□□□□□ -0.91
TRPS1-202ENST00000395713 FDX1P10109 184 aa9.36□□□□□ -0.91
TRPS1-202ENST00000395713 BCAMP50895 628 aa9.36□□□□□ -0.91
TRPS1-202ENST00000395713 PPP2R2DQ66LE6 453 aa9.36□□□□□ -0.91
TRPS1-202ENST00000395713 PCDHGC3Q9UN70 934 aa9.36□□□□□ -0.91
TRPS1-202ENST00000395713 SOWAHBA6NEL2 793 aa9.35□□□□□ -0.91
TRPS1-202ENST00000395713 LILRB3O75022 631 aa9.35□□□□□ -0.91
TRPS1-202ENST00000395713 KMT5BQ4FZB7 885 aa9.35□□□□□ -0.91
TRPS1-202ENST00000395713 WNT2BQ93097 391 aa9.35□□□□□ -0.91
TRPS1-202ENST00000395713 PPP4CP60510 307 aa9.34□□□□□ -0.91
TRPS1-202ENST00000395713 GRIPAP1Q4V328 841 aa9.34□□□□□ -0.91
TRPS1-202ENST00000395713 RTL5Q5HYW3 569 aaPredicted RBP9.34□□□□□ -0.91
TRPS1-202ENST00000395713 CABLES1Q8TDN4 633 aa9.34□□□□□ -0.91
TRPS1-202ENST00000395713 NECTIN2Q92692 538 aa9.34□□□□□ -0.91
TRPS1-202ENST00000395713 HPS5Q9UPZ3 1129 aa9.34□□□□□ -0.91
TRPS1-202ENST00000395713 NUTM2BA6NNL0 878 aaPredicted RBP9.33□□□□□ -0.92
TRPS1-202ENST00000395713 NUTM2EB1AL46 878 aaPredicted RBP9.33□□□□□ -0.92
TRPS1-202ENST00000395713 ATP6V1AP38606 617 aa9.33□□□□□ -0.92
TRPS1-202ENST00000395713 NUTM2DQ5VT03 806 aaPredicted RBP9.33□□□□□ -0.92
TRPS1-202ENST00000395713 NUTM2AQ8IVF1 878 aaPredicted RBP9.33□□□□□ -0.92
TRPS1-202ENST00000395713 ZMYND15Q9H091 742 aa9.33□□□□□ -0.92
TRPS1-202ENST00000395713 ACTN4O43707 911 aaKnown RBP9.32□□□□□ -0.92
TRPS1-202ENST00000395713 HRCP23327 699 aa9.32□□□□□ -0.92
TRPS1-202ENST00000395713 PRPF38BQ5VTL8 546 aaKnown RBP9.32□□□□□ -0.92
TRPS1-202ENST00000395713 TSR3Q9UJK0 312 aaKnown RBP9.32□□□□□ -0.92
TRPS1-202ENST00000395713 MCM6Q14566 821 aa9.31□□□□□ -0.92
TRPS1-202ENST00000395713 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
TRPS1-202ENST00000395713 ZBTB3Q9H5J0 574 aa9.31□□□□□ -0.92
TRPS1-202ENST00000395713 APLP1P51693 650 aa9.3□□□□□ -0.92
TRPS1-202ENST00000395713 TMEM259Q4ZIN3 620 aa9.3□□□□□ -0.92
TRPS1-202ENST00000395713 MORN1Q5T089 497 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms