RNA–Protein interactions for RNA: ENST00000395117.6

RASSF1-204, Transcript of Ras association domain family member 1, humanhuman

TSL 2

Gene RASSF1, Length 1,745 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF1-204ENST00000395117 STAC3Q96MF2 364 aa26.39■■□□□ 1.81
RASSF1-204ENST00000395117 TMEM2Q9UHN6 1383 aa26.37■■□□□ 1.81
RASSF1-204ENST00000395117 ADGRF5Q8IZF2 1346 aa26.37■■□□□ 1.81
RASSF1-204ENST00000395117 NEXMIFQ5QGS0 1516 aa26.36■■□□□ 1.81
RASSF1-204ENST00000395117 VGFO15240 615 aaPredicted RBP26.35■■□□□ 1.81
RASSF1-204ENST00000395117 RIMS2Q9UQ26 1411 aa26.35■■□□□ 1.81
RASSF1-204ENST00000395117 PPLO60437 1756 aa26.34■■□□□ 1.81
RASSF1-204ENST00000395117 IFT172Q9UG01 1749 aa26.34■■□□□ 1.81
RASSF1-204ENST00000395117 ZNF142P52746 1687 aaPredicted RBP26.34■■□□□ 1.81
RASSF1-204ENST00000395117 ZFYVE9O95405 1425 aa26.33■■□□□ 1.81
RASSF1-204ENST00000395117 LTKP29376 864 aa26.32■■□□□ 1.8
RASSF1-204ENST00000395117 PRAG1Q86YV5 1406 aa26.31■■□□□ 1.8
RASSF1-204ENST00000395117 HDGFP51858 240 aaKnown RBP26.31■■□□□ 1.8
RASSF1-204ENST00000395117 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.31■■□□□ 1.8
RASSF1-204ENST00000395117 MYOM2P54296 1465 aa26.3■■□□□ 1.8
RASSF1-204ENST00000395117 ARHGAP23Q9P227 1491 aa26.29■■□□□ 1.8
RASSF1-204ENST00000395117 TXNDC2Q86VQ3 553 aa26.29■■□□□ 1.8
RASSF1-204ENST00000395117 SLIT1O75093 1534 aa26.29■■□□□ 1.8
RASSF1-204ENST00000395117 SENP3Q9H4L4 574 aaPredicted RBP26.28■■□□□ 1.8
RASSF1-204ENST00000395117 NRXN1Q9ULB1 1477 aa26.27■■□□□ 1.8
RASSF1-204ENST00000395117 EID1Q9Y6B2 187 aa26.27■■□□□ 1.8
RASSF1-204ENST00000395117 PIK3C2GO75747 1445 aa26.23■■□□□ 1.79
RASSF1-204ENST00000395117 LMTK3Q96Q04 1460 aa26.23■■□□□ 1.79
RASSF1-204ENST00000395117 HSPA2P54652 639 aa26.23■■□□□ 1.79
RASSF1-204ENST00000395117 CFAP70Q5T0N1 1121 aa26.23■■□□□ 1.79
RASSF1-204ENST00000395117 NBPF1Q3BBV0 1214 aa26.22■■□□□ 1.79
RASSF1-204ENST00000395117 ANKLE2Q86XL3 938 aa26.22■■□□□ 1.79
RASSF1-204ENST00000395117 C14orf93Q9H972 538 aaKnown RBP26.2■■□□□ 1.79
RASSF1-204ENST00000395117 SCAF11Q99590 1463 aaKnown RBP26.18■■□□□ 1.78
RASSF1-204ENST00000395117 PLEKHG1Q9ULL1 1385 aa26.17■■□□□ 1.78
RASSF1-204ENST00000395117 NCKAP5LQ9HCH0 1330 aa26.16■■□□□ 1.78
RASSF1-204ENST00000395117 BCANQ96GW7 911 aa26.16■■□□□ 1.78
RASSF1-204ENST00000395117 RALGAPBQ86X10 1494 aa26.16■■□□□ 1.78
RASSF1-204ENST00000395117 TRPM1Q7Z4N2 1603 aa26.16■■□□□ 1.78
RASSF1-204ENST00000395117 ROCK2O75116 1388 aaKnown RBP26.14■■□□□ 1.78
RASSF1-204ENST00000395117 TMEM132EQ6IEE7 984 aa26.12■■□□□ 1.77
RASSF1-204ENST00000395117 CARD11Q9BXL7 1154 aa26.11■■□□□ 1.77
RASSF1-204ENST00000395117 ALKQ9UM73 1620 aa26.11■■□□□ 1.77
RASSF1-204ENST00000395117 NRXN3Q9Y4C0 1643 aa26.11■■□□□ 1.77
RASSF1-204ENST00000395117 SLC26A8Q96RN1 970 aa26.11■■□□□ 1.77
RASSF1-204ENST00000395117 SETBP1Q9Y6X0 1596 aa26.1■■□□□ 1.77
RASSF1-204ENST00000395117 GPRASP1Q5JY77 1395 aa26.1■■□□□ 1.77
RASSF1-204ENST00000395117 KIAA1210Q9ULL0 1709 aa26.1■■□□□ 1.77
RASSF1-204ENST00000395117 ADAMTS13Q76LX8 1427 aa26.1■■□□□ 1.77
RASSF1-204ENST00000395117 MED14O60244 1454 aa26.07■■□□□ 1.76
RASSF1-204ENST00000395117 IQGAP1P46940 1657 aa26.07■■□□□ 1.76
RASSF1-204ENST00000395117 TBX22Q9Y458 520 aa26.06■■□□□ 1.76
RASSF1-204ENST00000395117 METP08581 1390 aa26.05■■□□□ 1.76
RASSF1-204ENST00000395117 NPHP4O75161 1426 aaPredicted RBP26.05■■□□□ 1.76
RASSF1-204ENST00000395117 ADGRB1O14514 1584 aa26.05■■□□□ 1.76
RASSF1-204ENST00000395117 POLR1AO95602 1720 aaPredicted RBP26.04■■□□□ 1.76
RASSF1-204ENST00000395117 LAMC1P11047 1609 aa26.03■■□□□ 1.76
RASSF1-204ENST00000395117 AEBP2Q6ZN18 517 aaPredicted RBP26.03■■□□□ 1.76
RASSF1-204ENST00000395117 ASXL1Q8IXJ9 1541 aa26.02■■□□□ 1.76
RASSF1-204ENST00000395117 SETD1AO15047 1707 aaKnown RBP26.02■■□□□ 1.76
RASSF1-204ENST00000395117 EIF4G2P78344 907 aaKnown RBP eCLIP26■■□□□ 1.751e-13■■■■□ 25.2
RASSF1-204ENST00000395117 TRAK1Q9UPV9 953 aa26■■□□□ 1.75
RASSF1-204ENST00000395117 STRCQ7RTU9 1775 aa25.99■■□□□ 1.75
RASSF1-204ENST00000395117 HSPA5P11021 654 aaKnown RBP25.99■■□□□ 1.75
RASSF1-204ENST00000395117 HIRIP3Q9BW71 556 aaPredicted RBP25.99■■□□□ 1.75
RASSF1-204ENST00000395117 STK26Q9P289 416 aa25.99■■□□□ 1.75
RASSF1-204ENST00000395117 USP47Q96K76 1375 aa25.98■■□□□ 1.75
RASSF1-204ENST00000395117 YTHDC2Q9H6S0 1430 aaKnown RBP25.96■■□□□ 1.75
RASSF1-204ENST00000395117 DIP2AQ14689 1571 aa25.94■■□□□ 1.74
RASSF1-204ENST00000395117 ST20-MTHFSA0A0A6YYL1 179 aa25.94■■□□□ 1.74
RASSF1-204ENST00000395117 PTPRUQ92729 1446 aa25.94■■□□□ 1.74
RASSF1-204ENST00000395117 LRPPRCP42704 1394 aaKnown RBP25.93■■□□□ 1.74
RASSF1-204ENST00000395117 AMOTL2Q9Y2J4 779 aa25.92■■□□□ 1.74
RASSF1-204ENST00000395117 ABCC11Q96J66 1382 aa25.92■■□□□ 1.74
RASSF1-204ENST00000395117 PIK3R4Q99570 1358 aa25.91■■□□□ 1.74
RASSF1-204ENST00000395117 KCNA6P17658 529 aa25.85■■□□□ 1.73
RASSF1-204ENST00000395117 WAPLQ7Z5K2 1190 aa25.85■■□□□ 1.73
RASSF1-204ENST00000395117 DMRT2Q9Y5R5 561 aa25.85■■□□□ 1.73
RASSF1-204ENST00000395117 EIF3AQ14152 1382 aaKnown RBP25.85■■□□□ 1.73
RASSF1-204ENST00000395117 PRAM1Q96QH2 718 aa25.85■■□□□ 1.73
RASSF1-204ENST00000395117 TESK2Q96S53 571 aa25.85■■□□□ 1.73
RASSF1-204ENST00000395117 TECPR2O15040 1411 aa25.84■■□□□ 1.73
RASSF1-204ENST00000395117 SIRT1Q96EB6 747 aa25.84■■□□□ 1.73
RASSF1-204ENST00000395117 CHD2O14647 1828 aaKnown RBP25.83■■□□□ 1.73
RASSF1-204ENST00000395117 CENPJQ9HC77 1338 aaPredicted RBP25.83■■□□□ 1.73
RASSF1-204ENST00000395117 ROBO2Q9HCK4 1378 aa25.83■■□□□ 1.73
RASSF1-204ENST00000395117 SAFB2Q14151 953 aaKnown RBP eCLIP25.83■■□□□ 1.72
RASSF1-204ENST00000395117 ARHGEF28Q8N1W1 1705 aaKnown RBP25.82■■□□□ 1.72
RASSF1-204ENST00000395117 ZNF316A6NFI3 1004 aaPredicted RBP25.82■■□□□ 1.72
RASSF1-204ENST00000395117 POGKQ9P215 609 aa25.82■■□□□ 1.72
RASSF1-204ENST00000395117 DLC1Q96QB1 1528 aa25.81■■□□□ 1.72
RASSF1-204ENST00000395117 PLEKHH1Q9ULM0 1364 aa25.81■■□□□ 1.72
RASSF1-204ENST00000395117 C11orf95C9JLR9 678 aaPredicted RBP25.79■■□□□ 1.72
RASSF1-204ENST00000395117 FAM135BQ49AJ0 1406 aa25.79■■□□□ 1.72
RASSF1-204ENST00000395117 KNDC1Q76NI1 1749 aa25.78■■□□□ 1.72
RASSF1-204ENST00000395117 XRN1Q8IZH2 1706 aaKnown RBP25.78■■□□□ 1.72
RASSF1-204ENST00000395117 CPS1P31327 1500 aa25.78■■□□□ 1.72
RASSF1-204ENST00000395117 PTCH1Q13635 1447 aa25.76■■□□□ 1.71
RASSF1-204ENST00000395117 ZNF335Q9H4Z2 1342 aaPredicted RBP25.74■■□□□ 1.71
RASSF1-204ENST00000395117 RBM33Q96EV2 1170 aaKnown RBP25.74■■□□□ 1.71
RASSF1-204ENST00000395117 SBNO2Q9Y2G9 1366 aa25.74■■□□□ 1.71
RASSF1-204ENST00000395117 MINK1Q8N4C8 1332 aaPredicted RBP25.73■■□□□ 1.71
RASSF1-204ENST00000395117 NWD1Q149M9 1564 aa25.72■■□□□ 1.71
RASSF1-204ENST00000395117 STRCP1A6NGW2 1772 aa25.71■■□□□ 1.71
RASSF1-204ENST00000395117 QRICH2Q9H0J4 1663 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms