RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 ZFYVE9O95405 1425 aa31.15■■■□□ 2.58
POLR2J-202ENST00000393794 RPRD2Q5VT52 1461 aaKnown RBP31.13■■■□□ 2.57
POLR2J-202ENST00000393794 CHD2O14647 1828 aaKnown RBP31.11■■■□□ 2.57
POLR2J-202ENST00000393794 SLAIN2Q9P270 581 aa31.1■■■□□ 2.57
POLR2J-202ENST00000393794 PLEKHG1Q9ULL1 1385 aa31.09■■■□□ 2.57
POLR2J-202ENST00000393794 MSH6P52701 1360 aa31.08■■■□□ 2.57
POLR2J-202ENST00000393794 NCOA3Q9Y6Q9 1424 aa31.05■■■□□ 2.56
POLR2J-202ENST00000393794 MYO5BQ9ULV0 1848 aa31.05■■■□□ 2.56
POLR2J-202ENST00000393794 APLP2Q06481 763 aa31.04■■■□□ 2.56
POLR2J-202ENST00000393794 TMEM131LA2VDJ0 1609 aa31.04■■■□□ 2.56
POLR2J-202ENST00000393794 JCADQ9P266 1359 aa31.03■■■□□ 2.56
POLR2J-202ENST00000393794 PHLPP1O60346 1717 aa31.02■■■□□ 2.56
POLR2J-202ENST00000393794 ANKRD50Q9ULJ7 1429 aa31.02■■■□□ 2.56
POLR2J-202ENST00000393794 TBX22Q9Y458 520 aa31.02■■■□□ 2.56
POLR2J-202ENST00000393794 RIMS2Q9UQ26 1411 aa31.01■■■□□ 2.55
POLR2J-202ENST00000393794 COL16A1Q07092 1604 aaPredicted RBP31■■■□□ 2.55
POLR2J-202ENST00000393794 GCC2Q8IWJ2 1684 aa30.98■■■□□ 2.55
POLR2J-202ENST00000393794 HDGFP51858 240 aaKnown RBP30.96■■■□□ 2.55
POLR2J-202ENST00000393794 ADAMTS13Q76LX8 1427 aa30.96■■■□□ 2.55
POLR2J-202ENST00000393794 BCANQ96GW7 911 aa30.95■■■□□ 2.55
POLR2J-202ENST00000393794 LRP6O75581 1613 aa30.91■■■□□ 2.54
POLR2J-202ENST00000393794 PIK3R4Q99570 1358 aa30.91■■■□□ 2.54
POLR2J-202ENST00000393794 SETD1AO15047 1707 aaKnown RBP30.9■■■□□ 2.54
POLR2J-202ENST00000393794 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.9■■■□□ 2.54
POLR2J-202ENST00000393794 UNC13BO14795 1591 aa30.9■■■□□ 2.54
POLR2J-202ENST00000393794 AHDC1Q5TGY3 1603 aaPredicted RBP30.88■■■□□ 2.53
POLR2J-202ENST00000393794 PPP1R15AO75807 674 aaPredicted RBP30.88■■■□□ 2.53
POLR2J-202ENST00000393794 SPATA31A6Q5VVP1 1343 aa30.88■■■□□ 2.53
POLR2J-202ENST00000393794 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.87■■■□□ 2.53
POLR2J-202ENST00000393794 DIP2AQ14689 1571 aa30.87■■■□□ 2.53
POLR2J-202ENST00000393794 C19orf44Q9H6X5 657 aa30.86■■■□□ 2.53
POLR2J-202ENST00000393794 E9PCH4 1651 aa30.86■■■□□ 2.53
POLR2J-202ENST00000393794 CADPS2Q86UW7 1296 aa30.84■■■□□ 2.53
POLR2J-202ENST00000393794 FAM50AQ14320 339 aaKnown RBP30.83■■■□□ 2.53
POLR2J-202ENST00000393794 SHPRHQ149N8 1683 aa30.82■■■□□ 2.52
POLR2J-202ENST00000393794 PTPRUQ92729 1446 aa30.8■■■□□ 2.52
POLR2J-202ENST00000393794 IQGAP3Q86VI3 1631 aa30.78■■■□□ 2.52
POLR2J-202ENST00000393794 NUTM2DQ5VT03 806 aaPredicted RBP30.77■■■□□ 2.52
POLR2J-202ENST00000393794 ZNF772Q68DY9 489 aaPredicted RBP30.77■■■□□ 2.52
POLR2J-202ENST00000393794 ROCK1Q13464 1354 aa30.77■■■□□ 2.52
POLR2J-202ENST00000393794 ATF3P18847 181 aa30.75■■■□□ 2.51
POLR2J-202ENST00000393794 BRINP3Q76B58 766 aa30.75■■■□□ 2.51
POLR2J-202ENST00000393794 UPF1Q92900 1129 aaKnown RBP eCLIP30.75■■■□□ 2.51
POLR2J-202ENST00000393794 TRPM2O94759 1503 aa30.74■■■□□ 2.51
POLR2J-202ENST00000393794 CHGAP10645 457 aaKnown RBP30.74■■■□□ 2.51
POLR2J-202ENST00000393794 AMOTL2Q9Y2J4 779 aa30.74■■■□□ 2.51
POLR2J-202ENST00000393794 C14orf37Q86TY3 774 aa30.73■■■□□ 2.51
POLR2J-202ENST00000393794 DCCP43146 1447 aa30.73■■■□□ 2.51
POLR2J-202ENST00000393794 NRXN3Q9Y4C0 1643 aa30.71■■■□□ 2.51
POLR2J-202ENST00000393794 XRN1Q8IZH2 1706 aaKnown RBP30.69■■■□□ 2.5
POLR2J-202ENST00000393794 SETD5Q9C0A6 1442 aa30.67■■■□□ 2.5
POLR2J-202ENST00000393794 SETBP1Q9Y6X0 1596 aa30.66■■■□□ 2.5
POLR2J-202ENST00000393794 CDK12Q9NYV4 1490 aaPredicted RBP30.66■■■□□ 2.5
POLR2J-202ENST00000393794 MEX3CQ5U5Q3 659 aaKnown RBP30.66■■■□□ 2.5
POLR2J-202ENST00000393794 MST1RQ04912 1400 aa30.64■■■□□ 2.5
POLR2J-202ENST00000393794 ASXL1Q8IXJ9 1541 aa30.64■■■□□ 2.5
POLR2J-202ENST00000393794 NUP155O75694 1391 aa30.64■■■□□ 2.5
POLR2J-202ENST00000393794 RXRBP28702 533 aa30.62■■■□□ 2.49
POLR2J-202ENST00000393794 TRIM52Q96A61 297 aa30.62■■■□□ 2.49
POLR2J-202ENST00000393794 NHSL1Q5SYE7 1610 aa30.62■■■□□ 2.49
POLR2J-202ENST00000393794 METP08581 1390 aa30.58■■■□□ 2.49
POLR2J-202ENST00000393794 AFF2P51816 1311 aa30.54■■■□□ 2.48
POLR2J-202ENST00000393794 LRRC59Q96AG4 307 aaKnown RBP30.54■■■□□ 2.48
POLR2J-202ENST00000393794 SPHKAPQ2M3C7 1700 aa30.53■■■□□ 2.48
POLR2J-202ENST00000393794 NUTM2BA6NNL0 878 aaPredicted RBP30.53■■■□□ 2.48
POLR2J-202ENST00000393794 NUTM2EB1AL46 878 aaPredicted RBP30.53■■■□□ 2.48
POLR2J-202ENST00000393794 NUTM2AQ8IVF1 878 aaPredicted RBP30.53■■■□□ 2.48
POLR2J-202ENST00000393794 ADGRL3Q9HAR2 1447 aa30.52■■■□□ 2.48
POLR2J-202ENST00000393794 PNPLA6Q8IY17 1366 aa30.5■■■□□ 2.47
POLR2J-202ENST00000393794 NEXMIFQ5QGS0 1516 aa30.47■■■□□ 2.47
POLR2J-202ENST00000393794 LAMC1P11047 1609 aa30.47■■■□□ 2.47
POLR2J-202ENST00000393794 NALCNQ8IZF0 1738 aa30.45■■■□□ 2.47
POLR2J-202ENST00000393794 DDX17Q92841 729 aaKnown RBP30.45■■■□□ 2.47
POLR2J-202ENST00000393794 RGS12O14924 1447 aa30.44■■■□□ 2.46
POLR2J-202ENST00000393794 RBM6P78332 1123 aaKnown RBP30.43■■■□□ 2.46
POLR2J-202ENST00000393794 SRCAPQ6ZRS2 3230 aa30.43■■■□□ 2.46
POLR2J-202ENST00000393794 QTRT2Q9H974 415 aaKnown RBP30.42■■■□□ 2.46
POLR2J-202ENST00000393794 C1orf167Q5SNV9 1468 aa30.42■■■□□ 2.46
POLR2J-202ENST00000393794 CLTCL1P53675 1640 aa30.41■■■□□ 2.46
POLR2J-202ENST00000393794 ZNF326Q5BKZ1 582 aaKnown RBP30.41■■■□□ 2.46
POLR2J-202ENST00000393794 PRAG1Q86YV5 1406 aa30.39■■■□□ 2.46
POLR2J-202ENST00000393794 C8orf37Q96NL8 207 aa30.39■■■□□ 2.46
POLR2J-202ENST00000393794 PTCH1Q13635 1447 aa30.38■■■□□ 2.45
POLR2J-202ENST00000393794 SOS2Q07890 1332 aaPredicted RBP30.37■■■□□ 2.45
POLR2J-202ENST00000393794 ITGAEP38570 1179 aa30.35■■■□□ 2.45
POLR2J-202ENST00000393794 ROBO2Q9HCK4 1378 aa30.32■■■□□ 2.44
POLR2J-202ENST00000393794 KIF1BO60333 1816 aa30.31■■■□□ 2.44
POLR2J-202ENST00000393794 ORAI2Q96SN7 254 aa30.3■■■□□ 2.44
POLR2J-202ENST00000393794 FNBP4Q8N3X1 1017 aaPredicted RBP30.28■■■□□ 2.44
POLR2J-202ENST00000393794 NGLY1Q96IV0 654 aa30.28■■■□□ 2.44
POLR2J-202ENST00000393794 ADAMTS2O95450 1211 aa30.26■■■□□ 2.43
POLR2J-202ENST00000393794 VGFO15240 615 aaPredicted RBP30.25■■■□□ 2.43
POLR2J-202ENST00000393794 COL22A1Q8NFW1 1626 aaPredicted RBP30.25■■■□□ 2.43
POLR2J-202ENST00000393794 NAIPQ13075 1403 aa30.24■■■□□ 2.43
POLR2J-202ENST00000393794 EP400Q96L91 3159 aa30.22■■■□□ 2.43
POLR2J-202ENST00000393794 ATRNO75882 1429 aa30.22■■■□□ 2.43
POLR2J-202ENST00000393794 RPGRIP1LQ68CZ1 1315 aa30.22■■■□□ 2.43
POLR2J-202ENST00000393794 USP21Q9UK80 565 aa30.21■■■□□ 2.43
POLR2J-202ENST00000393794 TRPC5Q9UL62 973 aaPredicted RBP30.21■■■□□ 2.43
POLR2J-202ENST00000393794 HFM1A2PYH4 1435 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms