RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ZNF326Q5BKZ1 582 aaKnown RBP27.99■■■□□ 2.07
PDLIM7-204ENST00000393546 PPP1R15AO75807 674 aaPredicted RBP27.98■■■□□ 2.07
PDLIM7-204ENST00000393546 IQGAP1P46940 1657 aa27.97■■■□□ 2.07
PDLIM7-204ENST00000393546 KIF1BO60333 1816 aa27.97■■■□□ 2.07
PDLIM7-204ENST00000393546 ZFYVE9O95405 1425 aa27.96■■■□□ 2.07
PDLIM7-204ENST00000393546 CCDC144AA2RUR9 1427 aa27.95■■■□□ 2.07
PDLIM7-204ENST00000393546 BCANQ96GW7 911 aa27.95■■■□□ 2.06
PDLIM7-204ENST00000393546 ZNF335Q9H4Z2 1342 aaPredicted RBP27.92■■■□□ 2.06
PDLIM7-204ENST00000393546 NUTM2DQ5VT03 806 aaPredicted RBP27.92■■■□□ 2.06
PDLIM7-204ENST00000393546 PLEKHG1Q9ULL1 1385 aa27.88■■■□□ 2.05
PDLIM7-204ENST00000393546 CERKQ8TCT0 537 aa27.88■■■□□ 2.05
PDLIM7-204ENST00000393546 SLC26A8Q96RN1 970 aa27.87■■■□□ 2.05
PDLIM7-204ENST00000393546 RPGRIP1LQ68CZ1 1315 aa27.87■■■□□ 2.05
PDLIM7-204ENST00000393546 ANKRD30BQ9BXX2 1392 aa27.86■■■□□ 2.05
PDLIM7-204ENST00000393546 SENP3Q9H4L4 574 aaPredicted RBP27.86■■■□□ 2.05
PDLIM7-204ENST00000393546 LTBP4Q8N2S1 1624 aa27.85■■■□□ 2.05
PDLIM7-204ENST00000393546 RGL3Q3MIN7 710 aa27.83■■■□□ 2.05
PDLIM7-204ENST00000393546 VGFO15240 615 aaPredicted RBP27.81■■■□□ 2.04
PDLIM7-204ENST00000393546 TBX22Q9Y458 520 aa27.8■■■□□ 2.04
PDLIM7-204ENST00000393546 NEXMIFQ5QGS0 1516 aa27.8■■■□□ 2.04
PDLIM7-204ENST00000393546 SPATA31E1Q6ZUB1 1445 aa27.79■■■□□ 2.04
PDLIM7-204ENST00000393546 CPS1P31327 1500 aa27.76■■■□□ 2.03
PDLIM7-204ENST00000393546 KCNA6P17658 529 aa27.74■■■□□ 2.03
PDLIM7-204ENST00000393546 ADAMTS13Q76LX8 1427 aa27.73■■■□□ 2.03
PDLIM7-204ENST00000393546 FBXO41Q8TF61 875 aa27.71■■■□□ 2.03
PDLIM7-204ENST00000393546 PPLO60437 1756 aa27.71■■■□□ 2.03
PDLIM7-204ENST00000393546 PCGF6Q9BYE7 350 aa27.7■■■□□ 2.02
PDLIM7-204ENST00000393546 DIP2AQ14689 1571 aa27.69■■■□□ 2.02
PDLIM7-204ENST00000393546 STRCP1A6NGW2 1772 aa27.69■■■□□ 2.02
PDLIM7-204ENST00000393546 IQSEC2Q5JU85 1478 aa27.69■■■□□ 2.02
PDLIM7-204ENST00000393546 SETBP1Q9Y6X0 1596 aa27.69■■■□□ 2.02
PDLIM7-204ENST00000393546 PIK3R4Q99570 1358 aa27.67■■■□□ 2.02
PDLIM7-204ENST00000393546 DHX57Q6P158 1386 aaKnown RBP27.65■■■□□ 2.02
PDLIM7-204ENST00000393546 ADGRF5Q8IZF2 1346 aa27.65■■■□□ 2.02
PDLIM7-204ENST00000393546 NRXN3Q9Y4C0 1643 aa27.64■■■□□ 2.02
PDLIM7-204ENST00000393546 LRRC7Q96NW7 1537 aa27.63■■■□□ 2.01
PDLIM7-204ENST00000393546 CHD2O14647 1828 aaKnown RBP27.63■■■□□ 2.01
PDLIM7-204ENST00000393546 PROSER2Q86WR7 435 aaPredicted RBP27.63■■■□□ 2.01
PDLIM7-204ENST00000393546 IFT172Q9UG01 1749 aa27.62■■■□□ 2.01
PDLIM7-204ENST00000393546 AMOTL2Q9Y2J4 779 aa27.61■■■□□ 2.01
PDLIM7-204ENST00000393546 NWD1Q149M9 1564 aa27.6■■■□□ 2.01
PDLIM7-204ENST00000393546 DCAF11Q8TEB1 546 aa27.59■■■□□ 2.01
PDLIM7-204ENST00000393546 STAC3Q96MF2 364 aa27.59■■■□□ 2.01
PDLIM7-204ENST00000393546 METP08581 1390 aa27.59■■■□□ 2.01
PDLIM7-204ENST00000393546 NKTRP30414 1462 aaKnown RBP27.57■■■□□ 2
PDLIM7-204ENST00000393546 ALKQ9UM73 1620 aa27.57■■■□□ 2
PDLIM7-204ENST00000393546 KDM2AQ9Y2K7 1162 aa27.57■■■□□ 2
PDLIM7-204ENST00000393546 PTPRUQ92729 1446 aa27.56■■■□□ 2
PDLIM7-204ENST00000393546 UBAP1LF5GYI3 381 aa27.55■■■□□ 2
PDLIM7-204ENST00000393546 SIN3AQ96ST3 1273 aa27.55■■■□□ 2
PDLIM7-204ENST00000393546 MYOM2P54296 1465 aa27.54■■■□□ 2
PDLIM7-204ENST00000393546 TMEM94Q12767 1356 aa27.54■■■□□ 2
PDLIM7-204ENST00000393546 NEUROD1Q13562 356 aa27.53■■■□□ 2
PDLIM7-204ENST00000393546 PIK3C2GO75747 1445 aa27.52■■■□□ 2
PDLIM7-204ENST00000393546 TOM1O60784 492 aa27.52■■■□□ 2
PDLIM7-204ENST00000393546 RBM33Q96EV2 1170 aaKnown RBP27.52■■■□□ 2
PDLIM7-204ENST00000393546 C14orf93Q9H972 538 aaKnown RBP27.5■■□□□ 1.99
PDLIM7-204ENST00000393546 NRXN1Q9ULB1 1477 aa27.5■■□□□ 1.99
PDLIM7-204ENST00000393546 SETD1AO15047 1707 aaKnown RBP27.49■■□□□ 1.99
PDLIM7-204ENST00000393546 XIRP1Q702N8 1843 aaKnown RBP27.48■■□□□ 1.99
PDLIM7-204ENST00000393546 CFAP70Q5T0N1 1121 aa27.47■■□□□ 1.99
PDLIM7-204ENST00000393546 C14orf37Q86TY3 774 aa27.46■■□□□ 1.99
PDLIM7-204ENST00000393546 NCOA3Q9Y6Q9 1424 aa27.46■■□□□ 1.99
PDLIM7-204ENST00000393546 XRN1Q8IZH2 1706 aaKnown RBP27.45■■□□□ 1.99
PDLIM7-204ENST00000393546 TMEM132EQ6IEE7 984 aa27.45■■□□□ 1.98
PDLIM7-204ENST00000393546 MSH6P52701 1360 aa27.43■■□□□ 1.98
PDLIM7-204ENST00000393546 L3MBTL2Q969R5 705 aa27.42■■□□□ 1.98
PDLIM7-204ENST00000393546 STK26Q9P289 416 aa27.42■■□□□ 1.98
PDLIM7-204ENST00000393546 PIP4K2BP78356 416 aa27.4■■□□□ 1.98
PDLIM7-204ENST00000393546 C19orf44Q9H6X5 657 aa27.4■■□□□ 1.98
PDLIM7-204ENST00000393546 SCAF1Q9H7N4 1312 aaKnown RBP27.4■■□□□ 1.98
PDLIM7-204ENST00000393546 LRPPRCP42704 1394 aaKnown RBP27.39■■□□□ 1.98
PDLIM7-204ENST00000393546 LAMC1P11047 1609 aa27.39■■□□□ 1.98
PDLIM7-204ENST00000393546 PTCH1Q13635 1447 aa27.37■■□□□ 1.97
PDLIM7-204ENST00000393546 ABCC11Q96J66 1382 aa27.36■■□□□ 1.97
PDLIM7-204ENST00000393546 ROBO2Q9HCK4 1378 aa27.36■■□□□ 1.97
PDLIM7-204ENST00000393546 PRAG1Q86YV5 1406 aa27.36■■□□□ 1.97
PDLIM7-204ENST00000393546 YTHDC2Q9H6S0 1430 aaKnown RBP27.35■■□□□ 1.97
PDLIM7-204ENST00000393546 ASXL1Q8IXJ9 1541 aa27.35■■□□□ 1.97
PDLIM7-204ENST00000393546 ATF3P18847 181 aa27.34■■□□□ 1.97
PDLIM7-204ENST00000393546 CADPS2Q86UW7 1296 aa27.33■■□□□ 1.97
PDLIM7-204ENST00000393546 TECPR2O15040 1411 aa27.32■■□□□ 1.96
PDLIM7-204ENST00000393546 SIRT1Q96EB6 747 aa27.31■■□□□ 1.96
PDLIM7-204ENST00000393546 SLAIN2Q9P270 581 aa27.3■■□□□ 1.96
PDLIM7-204ENST00000393546 TONSLQ96HA7 1378 aa27.3■■□□□ 1.96
PDLIM7-204ENST00000393546 WAPLQ7Z5K2 1190 aa27.29■■□□□ 1.96
PDLIM7-204ENST00000393546 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.29■■□□□ 1.96
PDLIM7-204ENST00000393546 CLSPNQ9HAW4 1339 aa27.28■■□□□ 1.96
PDLIM7-204ENST00000393546 ADGRL3Q9HAR2 1447 aa27.27■■□□□ 1.96
PDLIM7-204ENST00000393546 KNDC1Q76NI1 1749 aa27.27■■□□□ 1.96
PDLIM7-204ENST00000393546 ADGRB1O14514 1584 aa27.26■■□□□ 1.96
PDLIM7-204ENST00000393546 TRAK1Q9UPV9 953 aa27.26■■□□□ 1.95
PDLIM7-204ENST00000393546 DCCP43146 1447 aa27.25■■□□□ 1.95
PDLIM7-204ENST00000393546 CCER1Q8TC90 406 aaPredicted RBP27.25■■□□□ 1.95
PDLIM7-204ENST00000393546 FAM135BQ49AJ0 1406 aa27.24■■□□□ 1.95
PDLIM7-204ENST00000393546 KIAA1210Q9ULL0 1709 aa27.24■■□□□ 1.95
PDLIM7-204ENST00000393546 POGKQ9P215 609 aa27.23■■□□□ 1.95
PDLIM7-204ENST00000393546 NBPF1Q3BBV0 1214 aa27.22■■□□□ 1.95
PDLIM7-204ENST00000393546 PRAM1Q96QH2 718 aa27.22■■□□□ 1.95
PDLIM7-204ENST00000393546 NALCNQ8IZF0 1738 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms