RNA–Protein interactions for RNA: ENST00000392854.4

LYPD6-202, Transcript of LY6/PLAUR domain containing 6, humanhuman

TSL 1 (best)

Gene LYPD6, Length 1,580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD6-202ENST00000392854 TRIM52Q96A61 297 aa9.85□□□□□ -0.83
LYPD6-202ENST00000392854 SCAF11Q99590 1463 aaKnown RBP9.85□□□□□ -0.83
LYPD6-202ENST00000392854 HDGFP51858 240 aaKnown RBP9.84□□□□□ -0.83
LYPD6-202ENST00000392854 IQGAP1P46940 1657 aa9.83□□□□□ -0.84
LYPD6-202ENST00000392854 ADGRB3O60242 1522 aa9.83□□□□□ -0.84
LYPD6-202ENST00000392854 IQSEC2Q5JU85 1478 aa9.82□□□□□ -0.84
LYPD6-202ENST00000392854 CHGAP10645 457 aaKnown RBP9.82□□□□□ -0.84
LYPD6-202ENST00000392854 ACIN1Q9UKV3 1341 aaKnown RBP9.82□□□□□ -0.84
LYPD6-202ENST00000392854 TMEM131LA2VDJ0 1609 aa9.81□□□□□ -0.84
LYPD6-202ENST00000392854 SLC4A1APQ9BWU0 796 aaKnown RBP9.81□□□□□ -0.84
LYPD6-202ENST00000392854 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.8□□□□□ -0.84
LYPD6-202ENST00000392854 CPS1P31327 1500 aa9.8□□□□□ -0.84
LYPD6-202ENST00000392854 MYO5BQ9ULV0 1848 aa9.8□□□□□ -0.84
LYPD6-202ENST00000392854 SPHKAPQ2M3C7 1700 aa9.79□□□□□ -0.84
LYPD6-202ENST00000392854 ZFYVE9O95405 1425 aa9.79□□□□□ -0.84
LYPD6-202ENST00000392854 SETD5Q9C0A6 1442 aa9.79□□□□□ -0.84
LYPD6-202ENST00000392854 RIMS2Q9UQ26 1411 aa9.79□□□□□ -0.84
LYPD6-202ENST00000392854 PPP1R15AO75807 674 aaPredicted RBP9.78□□□□□ -0.84
LYPD6-202ENST00000392854 BCANQ96GW7 911 aa9.78□□□□□ -0.84
LYPD6-202ENST00000392854 SLC26A8Q96RN1 970 aa9.78□□□□□ -0.84
LYPD6-202ENST00000392854 PLEKHG1Q9ULL1 1385 aa9.77□□□□□ -0.84
LYPD6-202ENST00000392854 MPHOSPH9Q99550 1183 aa9.77□□□□□ -0.85
LYPD6-202ENST00000392854 TRPM2O94759 1503 aa9.77□□□□□ -0.85
LYPD6-202ENST00000392854 STRCP1A6NGW2 1772 aa9.76□□□□□ -0.85
LYPD6-202ENST00000392854 NUTM2DQ5VT03 806 aaPredicted RBP9.76□□□□□ -0.85
LYPD6-202ENST00000392854 UBAP1LF5GYI3 381 aa9.75□□□□□ -0.85
LYPD6-202ENST00000392854 KCNA6P17658 529 aa9.75□□□□□ -0.85
LYPD6-202ENST00000392854 ZNF326Q5BKZ1 582 aaKnown RBP9.75□□□□□ -0.85
LYPD6-202ENST00000392854 TBX22Q9Y458 520 aa9.75□□□□□ -0.85
LYPD6-202ENST00000392854 TOM1O60784 492 aa9.75□□□□□ -0.85
LYPD6-202ENST00000392854 LRRC7Q96NW7 1537 aa9.75□□□□□ -0.85
LYPD6-202ENST00000392854 CLTCL1P53675 1640 aa9.74□□□□□ -0.85
LYPD6-202ENST00000392854 RAB3GAP2Q9H2M9 1393 aa9.74□□□□□ -0.85
LYPD6-202ENST00000392854 HRCP23327 699 aa9.74□□□□□ -0.85
LYPD6-202ENST00000392854 C1QBPQ07021 282 aaKnown RBP9.74□□□□□ -0.85
LYPD6-202ENST00000392854 KIF1BO60333 1816 aa9.73□□□□□ -0.85
LYPD6-202ENST00000392854 ADAMTS13Q76LX8 1427 aa9.72□□□□□ -0.85
LYPD6-202ENST00000392854 VGFO15240 615 aaPredicted RBP9.71□□□□□ -0.85
LYPD6-202ENST00000392854 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.85
LYPD6-202ENST00000392854 RPGRIP1LQ68CZ1 1315 aa9.71□□□□□ -0.85
LYPD6-202ENST00000392854 NCBP3Q53F19 620 aaKnown RBP9.71□□□□□ -0.86
LYPD6-202ENST00000392854 PIK3R4Q99570 1358 aa9.71□□□□□ -0.86
LYPD6-202ENST00000392854 CCDC144AA2RUR9 1427 aa9.71□□□□□ -0.86
LYPD6-202ENST00000392854 CHD2O14647 1828 aaKnown RBP9.7□□□□□ -0.86
LYPD6-202ENST00000392854 DIP2AQ14689 1571 aa9.7□□□□□ -0.86
LYPD6-202ENST00000392854 NEXMIFQ5QGS0 1516 aa9.7□□□□□ -0.86
LYPD6-202ENST00000392854 PIP4K2BP78356 416 aa9.7□□□□□ -0.86
LYPD6-202ENST00000392854 NWD1Q149M9 1564 aa9.69□□□□□ -0.86
LYPD6-202ENST00000392854 TMEM94Q12767 1356 aa9.69□□□□□ -0.86
LYPD6-202ENST00000392854 KCNA4P22459 653 aa9.69□□□□□ -0.86
LYPD6-202ENST00000392854 XIRP1Q702N8 1843 aaKnown RBP9.69□□□□□ -0.86
LYPD6-202ENST00000392854 NKTRP30414 1462 aaKnown RBP9.68□□□□□ -0.86
LYPD6-202ENST00000392854 RBM33Q96EV2 1170 aaKnown RBP9.68□□□□□ -0.86
LYPD6-202ENST00000392854 AMOTL2Q9Y2J4 779 aa9.68□□□□□ -0.86
LYPD6-202ENST00000392854 SETBP1Q9Y6X0 1596 aa9.68□□□□□ -0.86
LYPD6-202ENST00000392854 RGL3Q3MIN7 710 aa9.67□□□□□ -0.86
LYPD6-202ENST00000392854 ALKQ9UM73 1620 aa9.67□□□□□ -0.86
LYPD6-202ENST00000392854 NRXN3Q9Y4C0 1643 aa9.67□□□□□ -0.86
LYPD6-202ENST00000392854 SPATA31E1Q6ZUB1 1445 aa9.66□□□□□ -0.86
LYPD6-202ENST00000392854 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
LYPD6-202ENST00000392854 NCOA3Q9Y6Q9 1424 aa9.66□□□□□ -0.86
LYPD6-202ENST00000392854 METP08581 1390 aa9.65□□□□□ -0.86
LYPD6-202ENST00000392854 PPLO60437 1756 aa9.65□□□□□ -0.86
LYPD6-202ENST00000392854 MSH6P52701 1360 aa9.65□□□□□ -0.87
LYPD6-202ENST00000392854 ANKRD30BQ9BXX2 1392 aa9.65□□□□□ -0.87
LYPD6-202ENST00000392854 HSPA1LP34931 641 aa9.64□□□□□ -0.87
LYPD6-202ENST00000392854 ADGRF5Q8IZF2 1346 aa9.64□□□□□ -0.87
LYPD6-202ENST00000392854 C19orf44Q9H6X5 657 aa9.63□□□□□ -0.87
LYPD6-202ENST00000392854 C14orf37Q86TY3 774 aa9.63□□□□□ -0.87
LYPD6-202ENST00000392854 SLAIN2Q9P270 581 aa9.63□□□□□ -0.87
LYPD6-202ENST00000392854 FAM135BQ49AJ0 1406 aa9.62□□□□□ -0.87
LYPD6-202ENST00000392854 XRN1Q8IZH2 1706 aaKnown RBP9.62□□□□□ -0.87
LYPD6-202ENST00000392854 IFT172Q9UG01 1749 aa9.61□□□□□ -0.87
LYPD6-202ENST00000392854 CADPS2Q86UW7 1296 aa9.61□□□□□ -0.87
LYPD6-202ENST00000392854 SETD1AO15047 1707 aaKnown RBP9.6□□□□□ -0.87
LYPD6-202ENST00000392854 ATF3P18847 181 aa9.6□□□□□ -0.87
LYPD6-202ENST00000392854 STAC3Q96MF2 364 aa9.59□□□□□ -0.87
LYPD6-202ENST00000392854 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.59□□□□□ -0.87
LYPD6-202ENST00000392854 C14orf93Q9H972 538 aaKnown RBP9.58□□□□□ -0.88
LYPD6-202ENST00000392854 PIK3C2GO75747 1445 aa9.58□□□□□ -0.88
LYPD6-202ENST00000392854 TRIM26Q12899 539 aaPredicted RBP9.58□□□□□ -0.88
LYPD6-202ENST00000392854 DCAF11Q8TEB1 546 aa9.58□□□□□ -0.88
LYPD6-202ENST00000392854 DCCP43146 1447 aa9.58□□□□□ -0.88
LYPD6-202ENST00000392854 PTCH1Q13635 1447 aa9.58□□□□□ -0.88
LYPD6-202ENST00000392854 PRAG1Q86YV5 1406 aa9.58□□□□□ -0.88
LYPD6-202ENST00000392854 MYOM2P54296 1465 aa9.57□□□□□ -0.88
LYPD6-202ENST00000392854 NRXN1Q9ULB1 1477 aa9.57□□□□□ -0.88
LYPD6-202ENST00000392854 ROBO2Q9HCK4 1378 aa9.57□□□□□ -0.88
LYPD6-202ENST00000392854 ROBO1Q9Y6N7 1651 aa9.57□□□□□ -0.88
LYPD6-202ENST00000392854 TMEM132EQ6IEE7 984 aa9.57□□□□□ -0.88
LYPD6-202ENST00000392854 ADGRL3Q9HAR2 1447 aa9.56□□□□□ -0.88
LYPD6-202ENST00000392854 CFAP70Q5T0N1 1121 aa9.56□□□□□ -0.88
LYPD6-202ENST00000392854 STK26Q9P289 416 aa9.56□□□□□ -0.88
LYPD6-202ENST00000392854 KDM2AQ9Y2K7 1162 aa9.56□□□□□ -0.88
LYPD6-202ENST00000392854 LRPPRCP42704 1394 aaKnown RBP9.56□□□□□ -0.88
LYPD6-202ENST00000392854 ABCC11Q96J66 1382 aa9.56□□□□□ -0.88
LYPD6-202ENST00000392854 DHX57Q6P158 1386 aaKnown RBP9.55□□□□□ -0.88
LYPD6-202ENST00000392854 DISP3Q9P2K9 1392 aa9.55□□□□□ -0.88
LYPD6-202ENST00000392854 TECPR2O15040 1411 aa9.55□□□□□ -0.88
LYPD6-202ENST00000392854 SIRT1Q96EB6 747 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms