RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 HDGFP51858 240 aaKnown RBP16.6■□□□□ 0.25
TRAF3IP2-208ENST00000392556 CFAP65Q6ZU64 1925 aaKnown RBP16.59■□□□□ 0.25
TRAF3IP2-208ENST00000392556 HSPA1LP34931 641 aa16.59■□□□□ 0.25
TRAF3IP2-208ENST00000392556 ILDR2Q71H61 639 aa16.59■□□□□ 0.25
TRAF3IP2-208ENST00000392556 ADGRB3O60242 1522 aa16.59■□□□□ 0.25
TRAF3IP2-208ENST00000392556 TET3O43151 1660 aa16.57■□□□□ 0.24
TRAF3IP2-208ENST00000392556 STRCP1A6NGW2 1772 aa16.57■□□□□ 0.24
TRAF3IP2-208ENST00000392556 KCNA6P17658 529 aa16.55■□□□□ 0.24
TRAF3IP2-208ENST00000392556 ALKQ9UM73 1620 aa16.55■□□□□ 0.24
TRAF3IP2-208ENST00000392556 UNC13BO14795 1591 aa16.55■□□□□ 0.24
TRAF3IP2-208ENST00000392556 GCC2Q8IWJ2 1684 aa16.53■□□□□ 0.24
TRAF3IP2-208ENST00000392556 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.24
TRAF3IP2-208ENST00000392556 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
TRAF3IP2-208ENST00000392556 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
TRAF3IP2-208ENST00000392556 PLEKHG1Q9ULL1 1385 aa16.5■□□□□ 0.23
TRAF3IP2-208ENST00000392556 FAM135BQ49AJ0 1406 aa16.5■□□□□ 0.23
TRAF3IP2-208ENST00000392556 NWD1Q149M9 1564 aa16.49■□□□□ 0.23
TRAF3IP2-208ENST00000392556 ZFYVE9O95405 1425 aa16.49■□□□□ 0.23
TRAF3IP2-208ENST00000392556 IQGAP3Q86VI3 1631 aa16.48■□□□□ 0.23
TRAF3IP2-208ENST00000392556 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
TRAF3IP2-208ENST00000392556 TMEM94Q12767 1356 aa16.48■□□□□ 0.23
TRAF3IP2-208ENST00000392556 RIMS2Q9UQ26 1411 aa16.47■□□□□ 0.23
TRAF3IP2-208ENST00000392556 NCOA3Q9Y6Q9 1424 aa16.47■□□□□ 0.23
TRAF3IP2-208ENST00000392556 PPP1R15AO75807 674 aaPredicted RBP16.46■□□□□ 0.23
TRAF3IP2-208ENST00000392556 PROSER2Q86WR7 435 aaPredicted RBP16.46■□□□□ 0.23
TRAF3IP2-208ENST00000392556 TBX22Q9Y458 520 aa16.46■□□□□ 0.23
TRAF3IP2-208ENST00000392556 TMEM131LA2VDJ0 1609 aa16.46■□□□□ 0.23
TRAF3IP2-208ENST00000392556 SLC26A8Q96RN1 970 aa16.45■□□□□ 0.22
TRAF3IP2-208ENST00000392556 BCANQ96GW7 911 aa16.45■□□□□ 0.22
TRAF3IP2-208ENST00000392556 PIK3R4Q99570 1358 aa16.45■□□□□ 0.22
TRAF3IP2-208ENST00000392556 NUP155O75694 1391 aa16.44■□□□□ 0.22
TRAF3IP2-208ENST00000392556 XIRP1Q702N8 1843 aaKnown RBP16.44■□□□□ 0.22
TRAF3IP2-208ENST00000392556 DIP2AQ14689 1571 aa16.44■□□□□ 0.22
TRAF3IP2-208ENST00000392556 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
TRAF3IP2-208ENST00000392556 MSH6P52701 1360 aa16.43■□□□□ 0.22
TRAF3IP2-208ENST00000392556 E9PCH4 1651 aa16.43■□□□□ 0.22
TRAF3IP2-208ENST00000392556 CCER1Q8TC90 406 aaPredicted RBP16.42■□□□□ 0.22
TRAF3IP2-208ENST00000392556 ZNF316A6NFI3 1004 aaPredicted RBP16.4■□□□□ 0.22
TRAF3IP2-208ENST00000392556 CHGAP10645 457 aaKnown RBP16.38■□□□□ 0.21
TRAF3IP2-208ENST00000392556 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
TRAF3IP2-208ENST00000392556 RRBP1Q9P2E9 1410 aaKnown RBP16.37■□□□□ 0.21
TRAF3IP2-208ENST00000392556 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
TRAF3IP2-208ENST00000392556 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
TRAF3IP2-208ENST00000392556 MYO5BQ9ULV0 1848 aa16.36■□□□□ 0.21
TRAF3IP2-208ENST00000392556 YTHDC1Q96MU7 727 aaKnown RBP16.36■□□□□ 0.21
TRAF3IP2-208ENST00000392556 TRPM2O94759 1503 aa16.35■□□□□ 0.21
TRAF3IP2-208ENST00000392556 SLC24A1O60721 1099 aa16.35■□□□□ 0.21
TRAF3IP2-208ENST00000392556 SLAIN2Q9P270 581 aa16.35■□□□□ 0.21
TRAF3IP2-208ENST00000392556 ITGAEP38570 1179 aa16.34■□□□□ 0.21
TRAF3IP2-208ENST00000392556 ROBO1Q9Y6N7 1651 aa16.34■□□□□ 0.21
TRAF3IP2-208ENST00000392556 CADPS2Q86UW7 1296 aa16.33■□□□□ 0.2
TRAF3IP2-208ENST00000392556 C19orf44Q9H6X5 657 aa16.32■□□□□ 0.2
TRAF3IP2-208ENST00000392556 SPHKAPQ2M3C7 1700 aa16.31■□□□□ 0.2
TRAF3IP2-208ENST00000392556 DCCP43146 1447 aa16.3■□□□□ 0.2
TRAF3IP2-208ENST00000392556 SETBP1Q9Y6X0 1596 aa16.3■□□□□ 0.2
TRAF3IP2-208ENST00000392556 JCADQ9P266 1359 aa16.29■□□□□ 0.2
TRAF3IP2-208ENST00000392556 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
TRAF3IP2-208ENST00000392556 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
TRAF3IP2-208ENST00000392556 NAIPQ13075 1403 aa16.29■□□□□ 0.2
TRAF3IP2-208ENST00000392556 ATF3P18847 181 aa16.28■□□□□ 0.2
TRAF3IP2-208ENST00000392556 AMOTL2Q9Y2J4 779 aa16.28■□□□□ 0.2
TRAF3IP2-208ENST00000392556 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
TRAF3IP2-208ENST00000392556 HFM1A2PYH4 1435 aa16.27■□□□□ 0.2
TRAF3IP2-208ENST00000392556 ZNF326Q5BKZ1 582 aaKnown RBP16.26■□□□□ 0.19
TRAF3IP2-208ENST00000392556 MIER1Q8N108 512 aa16.26■□□□□ 0.19
TRAF3IP2-208ENST00000392556 PHLPP1O60346 1717 aa16.25■□□□□ 0.19
TRAF3IP2-208ENST00000392556 SPATA31A6Q5VVP1 1343 aa16.25■□□□□ 0.19
TRAF3IP2-208ENST00000392556 NUTM2DQ5VT03 806 aaPredicted RBP16.24■□□□□ 0.19
TRAF3IP2-208ENST00000392556 RPGRIP1LQ68CZ1 1315 aa16.24■□□□□ 0.19
TRAF3IP2-208ENST00000392556 AHDC1Q5TGY3 1603 aaPredicted RBP16.24■□□□□ 0.19
TRAF3IP2-208ENST00000392556 PTPRUQ92729 1446 aa16.23■□□□□ 0.19
TRAF3IP2-208ENST00000392556 RGS17Q9UGC6 210 aaPredicted RBP16.23■□□□□ 0.19
TRAF3IP2-208ENST00000392556 XRN1Q8IZH2 1706 aaKnown RBP16.23■□□□□ 0.19
TRAF3IP2-208ENST00000392556 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.23■□□□□ 0.19
TRAF3IP2-208ENST00000392556 NRXN3Q9Y4C0 1643 aa16.23■□□□□ 0.19
TRAF3IP2-208ENST00000392556 VGFO15240 615 aaPredicted RBP16.22■□□□□ 0.19
TRAF3IP2-208ENST00000392556 NEXMIFQ5QGS0 1516 aa16.22■□□□□ 0.19
TRAF3IP2-208ENST00000392556 CLTCL1P53675 1640 aa16.21■□□□□ 0.19
TRAF3IP2-208ENST00000392556 COL16A1Q07092 1604 aaPredicted RBP16.21■□□□□ 0.19
TRAF3IP2-208ENST00000392556 KIF1BO60333 1816 aa16.2■□□□□ 0.18
TRAF3IP2-208ENST00000392556 PRAG1Q86YV5 1406 aa16.19■□□□□ 0.18
TRAF3IP2-208ENST00000392556 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
TRAF3IP2-208ENST00000392556 METP08581 1390 aa16.18■□□□□ 0.18
TRAF3IP2-208ENST00000392556 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
TRAF3IP2-208ENST00000392556 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
TRAF3IP2-208ENST00000392556 PTCH1Q13635 1447 aa16.17■□□□□ 0.18
TRAF3IP2-208ENST00000392556 BRINP3Q76B58 766 aa16.16■□□□□ 0.18
TRAF3IP2-208ENST00000392556 SHPRHQ149N8 1683 aa16.16■□□□□ 0.18
TRAF3IP2-208ENST00000392556 MST1RQ04912 1400 aa16.15■□□□□ 0.18
TRAF3IP2-208ENST00000392556 ZNF772Q68DY9 489 aaPredicted RBP16.15■□□□□ 0.18
TRAF3IP2-208ENST00000392556 POTEAQ6S8J7 498 aa16.14■□□□□ 0.17
TRAF3IP2-208ENST00000392556 SETD5Q9C0A6 1442 aa16.14■□□□□ 0.17
TRAF3IP2-208ENST00000392556 ASXL1Q8IXJ9 1541 aa16.14■□□□□ 0.17
TRAF3IP2-208ENST00000392556 LRRC59Q96AG4 307 aaKnown RBP16.12■□□□□ 0.17
TRAF3IP2-208ENST00000392556 MEX3CQ5U5Q3 659 aaKnown RBP16.11■□□□□ 0.17
TRAF3IP2-208ENST00000392556 NHSL1Q5SYE7 1610 aa16.1■□□□□ 0.17
TRAF3IP2-208ENST00000392556 CCDC144AA2RUR9 1427 aa16.09■□□□□ 0.17
TRAF3IP2-208ENST00000392556 ANKRD30BQ9BXX2 1392 aa16.09■□□□□ 0.17
TRAF3IP2-208ENST00000392556 LRP6O75581 1613 aa16.08■□□□□ 0.17
TRAF3IP2-208ENST00000392556 SETD1AO15047 1707 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms