RNA–Protein interactions for RNA: ENST00000391762.5

NDUFA3-202, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 5 BASIC

Gene NDUFA3, Length 435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-202ENST00000391762 DIP2AQ14689 1571 aa13.96□□□□□ -0.17
NDUFA3-202ENST00000391762 NEXMIFQ5QGS0 1516 aa13.96□□□□□ -0.17
NDUFA3-202ENST00000391762 SLC52A1Q9NWF4 448 aa13.96□□□□□ -0.17
NDUFA3-202ENST00000391762 RIMS2Q9UQ26 1411 aa13.96□□□□□ -0.18
NDUFA3-202ENST00000391762 XRN1Q8IZH2 1706 aaKnown RBP13.95□□□□□ -0.18
NDUFA3-202ENST00000391762 IFT172Q9UG01 1749 aa13.95□□□□□ -0.18
NDUFA3-202ENST00000391762 PPLO60437 1756 aa13.95□□□□□ -0.18
NDUFA3-202ENST00000391762 SETBP1Q9Y6X0 1596 aa13.95□□□□□ -0.18
NDUFA3-202ENST00000391762 NKTRP30414 1462 aaKnown RBP13.94□□□□□ -0.18
NDUFA3-202ENST00000391762 ADAMTS13Q76LX8 1427 aa13.94□□□□□ -0.18
NDUFA3-202ENST00000391762 TXNDC2Q86VQ3 553 aa13.94□□□□□ -0.18
NDUFA3-202ENST00000391762 PLEKHG1Q9ULL1 1385 aa13.94□□□□□ -0.18
NDUFA3-202ENST00000391762 EID1Q9Y6B2 187 aa13.88□□□□□ -0.19
NDUFA3-202ENST00000391762 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
NDUFA3-202ENST00000391762 UBAP1LF5GYI3 381 aa13.86□□□□□ -0.19
NDUFA3-202ENST00000391762 ROBO1Q9Y6N7 1651 aa13.85□□□□□ -0.19
NDUFA3-202ENST00000391762 NALCNQ8IZF0 1738 aa13.85□□□□□ -0.19
NDUFA3-202ENST00000391762 PTPRUQ92729 1446 aa13.85□□□□□ -0.19
NDUFA3-202ENST00000391762 SLC26A8Q96RN1 970 aa13.85□□□□□ -0.19
NDUFA3-202ENST00000391762 TMEM94Q12767 1356 aa13.84□□□□□ -0.19
NDUFA3-202ENST00000391762 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
NDUFA3-202ENST00000391762 SPATA31E1Q6ZUB1 1445 aa13.82□□□□□ -0.2
NDUFA3-202ENST00000391762 MED1Q15648 1581 aaPredicted RBP13.81□□□□□ -0.2
NDUFA3-202ENST00000391762 KCNA6P17658 529 aa13.81□□□□□ -0.2
NDUFA3-202ENST00000391762 PIK3R4Q99570 1358 aa13.81□□□□□ -0.2
NDUFA3-202ENST00000391762 SETD5Q9C0A6 1442 aa13.81□□□□□ -0.2
NDUFA3-202ENST00000391762 ASXL1Q8IXJ9 1541 aa13.8□□□□□ -0.2
NDUFA3-202ENST00000391762 NUTM2DQ5VT03 806 aaPredicted RBP13.8□□□□□ -0.2
NDUFA3-202ENST00000391762 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
NDUFA3-202ENST00000391762 PRAG1Q86YV5 1406 aa13.8□□□□□ -0.2
NDUFA3-202ENST00000391762 CHGAP10645 457 aaKnown RBP13.79□□□□□ -0.2
NDUFA3-202ENST00000391762 RAB3GAP2Q9H2M9 1393 aa13.79□□□□□ -0.2
NDUFA3-202ENST00000391762 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.78□□□□□ -0.2
NDUFA3-202ENST00000391762 TBX22Q9Y458 520 aa13.78□□□□□ -0.2
NDUFA3-202ENST00000391762 KNDC1Q76NI1 1749 aa13.78□□□□□ -0.2
NDUFA3-202ENST00000391762 PPP1R15AO75807 674 aaPredicted RBP13.77□□□□□ -0.21
NDUFA3-202ENST00000391762 METP08581 1390 aa13.77□□□□□ -0.21
NDUFA3-202ENST00000391762 HSPA1LP34931 641 aa13.77□□□□□ -0.21
NDUFA3-202ENST00000391762 COL16A1Q07092 1604 aaPredicted RBP13.77□□□□□ -0.21
NDUFA3-202ENST00000391762 FOXD1Q16676 465 aa13.77□□□□□ -0.21
NDUFA3-202ENST00000391762 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
NDUFA3-202ENST00000391762 TOM1O60784 492 aa13.76□□□□□ -0.21
NDUFA3-202ENST00000391762 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
NDUFA3-202ENST00000391762 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
NDUFA3-202ENST00000391762 PIP4K2BP78356 416 aa13.75□□□□□ -0.21
NDUFA3-202ENST00000391762 PHLPP1O60346 1717 aa13.75□□□□□ -0.21
NDUFA3-202ENST00000391762 CCDC144AA2RUR9 1427 aa13.74□□□□□ -0.21
NDUFA3-202ENST00000391762 FAM135BQ49AJ0 1406 aa13.74□□□□□ -0.21
NDUFA3-202ENST00000391762 NCOA3Q9Y6Q9 1424 aa13.74□□□□□ -0.21
NDUFA3-202ENST00000391762 NHSL1Q5SYE7 1610 aa13.74□□□□□ -0.21
NDUFA3-202ENST00000391762 LAMC1P11047 1609 aa13.73□□□□□ -0.21
NDUFA3-202ENST00000391762 MPHOSPH9Q99550 1183 aa13.73□□□□□ -0.21
NDUFA3-202ENST00000391762 NRXN1Q9ULB1 1477 aa13.73□□□□□ -0.21
NDUFA3-202ENST00000391762 PTCH1Q13635 1447 aa13.73□□□□□ -0.21
NDUFA3-202ENST00000391762 AHDC1Q5TGY3 1603 aaPredicted RBP13.72□□□□□ -0.21
NDUFA3-202ENST00000391762 DCCP43146 1447 aa13.72□□□□□ -0.21
NDUFA3-202ENST00000391762 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
NDUFA3-202ENST00000391762 HDGFP51858 240 aaKnown RBP13.71□□□□□ -0.21
NDUFA3-202ENST00000391762 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.21
NDUFA3-202ENST00000391762 PIK3C2GO75747 1445 aa13.71□□□□□ -0.22
NDUFA3-202ENST00000391762 MYOM2P54296 1465 aa13.7□□□□□ -0.22
NDUFA3-202ENST00000391762 ADGRL3Q9HAR2 1447 aa13.7□□□□□ -0.22
NDUFA3-202ENST00000391762 MSH6P52701 1360 aa13.7□□□□□ -0.22
NDUFA3-202ENST00000391762 ZNF326Q5BKZ1 582 aaKnown RBP13.69□□□□□ -0.22
NDUFA3-202ENST00000391762 SHPRHQ149N8 1683 aa13.69□□□□□ -0.22
NDUFA3-202ENST00000391762 MST1RQ04912 1400 aa13.68□□□□□ -0.22
NDUFA3-202ENST00000391762 BCANQ96GW7 911 aa13.68□□□□□ -0.22
NDUFA3-202ENST00000391762 DISP3Q9P2K9 1392 aa13.68□□□□□ -0.22
NDUFA3-202ENST00000391762 CDC42BPGQ6DT37 1551 aa13.67□□□□□ -0.22
NDUFA3-202ENST00000391762 TECPR2O15040 1411 aa13.67□□□□□ -0.22
NDUFA3-202ENST00000391762 AMOTL2Q9Y2J4 779 aa13.67□□□□□ -0.22
NDUFA3-202ENST00000391762 ANKRD30BQ9BXX2 1392 aa13.67□□□□□ -0.22
NDUFA3-202ENST00000391762 ROBO2Q9HCK4 1378 aa13.67□□□□□ -0.22
NDUFA3-202ENST00000391762 RPGRIP1LQ68CZ1 1315 aa13.66□□□□□ -0.22
NDUFA3-202ENST00000391762 ADGRF5Q8IZF2 1346 aa13.65□□□□□ -0.22
NDUFA3-202ENST00000391762 FMN2Q9NZ56 1722 aa13.65□□□□□ -0.22
NDUFA3-202ENST00000391762 ADGRB1O14514 1584 aa13.65□□□□□ -0.22
NDUFA3-202ENST00000391762 ILDR2Q71H61 639 aa13.64□□□□□ -0.23
NDUFA3-202ENST00000391762 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
NDUFA3-202ENST00000391762 VGFO15240 615 aaPredicted RBP13.62□□□□□ -0.23
NDUFA3-202ENST00000391762 RGPD8O14715 1765 aaPredicted RBP13.62□□□□□ -0.23
NDUFA3-202ENST00000391762 SLAIN2Q9P270 581 aa13.61□□□□□ -0.23
NDUFA3-202ENST00000391762 ARHGEF28Q8N1W1 1705 aaKnown RBP13.61□□□□□ -0.23
NDUFA3-202ENST00000391762 LRP6O75581 1613 aa13.61□□□□□ -0.23
NDUFA3-202ENST00000391762 C19orf44Q9H6X5 657 aa13.6□□□□□ -0.23
NDUFA3-202ENST00000391762 ADGRB2O60241 1585 aa13.59□□□□□ -0.23
NDUFA3-202ENST00000391762 HRCP23327 699 aa13.59□□□□□ -0.23
NDUFA3-202ENST00000391762 USP32Q8NFA0 1604 aa13.59□□□□□ -0.23
NDUFA3-202ENST00000391762 KIAA1210Q9ULL0 1709 aa13.59□□□□□ -0.23
NDUFA3-202ENST00000391762 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.23
NDUFA3-202ENST00000391762 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.24
NDUFA3-202ENST00000391762 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
NDUFA3-202ENST00000391762 RGL3Q3MIN7 710 aa13.58□□□□□ -0.24
NDUFA3-202ENST00000391762 C1orf167Q5SNV9 1468 aa13.58□□□□□ -0.24
NDUFA3-202ENST00000391762 DLC1Q96QB1 1528 aa13.58□□□□□ -0.24
NDUFA3-202ENST00000391762 BRINP3Q76B58 766 aa13.57□□□□□ -0.24
NDUFA3-202ENST00000391762 CADPS2Q86UW7 1296 aa13.57□□□□□ -0.24
NDUFA3-202ENST00000391762 DHX57Q6P158 1386 aaKnown RBP13.57□□□□□ -0.24
NDUFA3-202ENST00000391762 PLEKHH1Q9ULM0 1364 aa13.57□□□□□ -0.24
NDUFA3-202ENST00000391762 SOCS7O14512 581 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms