RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 MYO5CQ9NQX4 1742 aa27.38■■□□□ 1.97
COL23A1-201ENST00000390654 CFAP70Q5T0N1 1121 aa27.38■■□□□ 1.97
COL23A1-201ENST00000390654 CENPQQ7L2Z9 268 aaPredicted RBP27.36■■□□□ 1.97
COL23A1-201ENST00000390654 PPM1GO15355 546 aaPredicted RBP27.35■■□□□ 1.97
COL23A1-201ENST00000390654 SLFN5Q08AF3 891 aa27.35■■□□□ 1.97
COL23A1-201ENST00000390654 UNC13BO14795 1591 aa27.34■■□□□ 1.97
COL23A1-201ENST00000390654 ABCC2Q92887 1545 aa27.34■■□□□ 1.97
COL23A1-201ENST00000390654 DDRGK1Q96HY6 314 aa27.34■■□□□ 1.97
COL23A1-201ENST00000390654 PLCH2O75038 1416 aa27.33■■□□□ 1.97
COL23A1-201ENST00000390654 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.33■■□□□ 1.97
COL23A1-201ENST00000390654 C8orf34Q49A92 452 aa27.32■■□□□ 1.96
COL23A1-201ENST00000390654 NUTM2DQ5VT03 806 aaPredicted RBP27.31■■□□□ 1.96
COL23A1-201ENST00000390654 ZNF521Q96K83 1311 aa27.31■■□□□ 1.96
COL23A1-201ENST00000390654 DUOX2Q9NRD8 1548 aa27.31■■□□□ 1.96
COL23A1-201ENST00000390654 NFKBIBQ15653 356 aa27.3■■□□□ 1.96
COL23A1-201ENST00000390654 FAM161AQ3B820 660 aa27.3■■□□□ 1.96
COL23A1-201ENST00000390654 CDCA8Q53HL2 280 aa27.3■■□□□ 1.96
COL23A1-201ENST00000390654 RRP7AQ9Y3A4 280 aaKnown RBP27.3■■□□□ 1.96
COL23A1-201ENST00000390654 IQGAP3Q86VI3 1631 aa27.29■■□□□ 1.96
COL23A1-201ENST00000390654 SCAPERQ9BY12 1400 aa27.28■■□□□ 1.96
COL23A1-201ENST00000390654 EIF2AK4Q9P2K8 1649 aaKnown RBP27.28■■□□□ 1.96
COL23A1-201ENST00000390654 CANXP27824 592 aaKnown RBP27.27■■□□□ 1.96
COL23A1-201ENST00000390654 FRAT1Q92837 279 aaPredicted RBP27.27■■□□□ 1.96
COL23A1-201ENST00000390654 ADGRF5Q8IZF2 1346 aa27.26■■□□□ 1.95
COL23A1-201ENST00000390654 CARD14Q9BXL6 1004 aa27.26■■□□□ 1.95
COL23A1-201ENST00000390654 IGHDP01880 384 aa27.25■■□□□ 1.95
COL23A1-201ENST00000390654 PANK1Q8TE04 598 aa27.25■■□□□ 1.95
COL23A1-201ENST00000390654 USP35Q9P2H5 1018 aa27.25■■□□□ 1.95
COL23A1-201ENST00000390654 COG6Q9Y2V7 657 aa27.24■■□□□ 1.95
COL23A1-201ENST00000390654 MAST1Q9Y2H9 1570 aa27.24■■□□□ 1.95
COL23A1-201ENST00000390654 GGT6Q6P531 493 aa27.22■■□□□ 1.95
COL23A1-201ENST00000390654 TRAK1Q9UPV9 953 aa27.22■■□□□ 1.95
COL23A1-201ENST00000390654 SCAF11Q99590 1463 aaKnown RBP27.21■■□□□ 1.95
COL23A1-201ENST00000390654 BCL2L13Q9BXK5 485 aa27.21■■□□□ 1.95
COL23A1-201ENST00000390654 BRPF3Q9ULD4 1205 aa27.21■■□□□ 1.95
COL23A1-201ENST00000390654 INSRP06213 1382 aa27.21■■□□□ 1.95
COL23A1-201ENST00000390654 LAMC1P11047 1609 aa27.2■■□□□ 1.94
COL23A1-201ENST00000390654 UGGT1Q9NYU2 1555 aa27.2■■□□□ 1.94
COL23A1-201ENST00000390654 ANO8Q9HCE9 1232 aaPredicted RBP27.2■■□□□ 1.94
COL23A1-201ENST00000390654 ASXL1Q8IXJ9 1541 aa27.2■■□□□ 1.94
COL23A1-201ENST00000390654 ATP10AO60312 1499 aa27.19■■□□□ 1.94
COL23A1-201ENST00000390654 ZCCHC11Q5TAX3 1644 aaKnown RBP27.19■■□□□ 1.94
COL23A1-201ENST00000390654 TMEM132EQ6IEE7 984 aa27.18■■□□□ 1.94
COL23A1-201ENST00000390654 PLXNC1O60486 1568 aa27.18■■□□□ 1.94
COL23A1-201ENST00000390654 FRAT2O75474 233 aaPredicted RBP27.18■■□□□ 1.94
COL23A1-201ENST00000390654 KANK1Q14678 1352 aa27.16■■□□□ 1.94
COL23A1-201ENST00000390654 SAFB2Q14151 953 aaKnown RBP eCLIP27.16■■□□□ 1.94
COL23A1-201ENST00000390654 TNNQ9UQP3 1299 aa27.16■■□□□ 1.94
COL23A1-201ENST00000390654 MADDQ8WXG6 1647 aa27.16■■□□□ 1.94
COL23A1-201ENST00000390654 GSE1Q14687 1217 aa27.15■■□□□ 1.94
COL23A1-201ENST00000390654 E9PSI1 815 aa27.15■■□□□ 1.94
COL23A1-201ENST00000390654 SEC24BO95487 1268 aa27.15■■□□□ 1.94
COL23A1-201ENST00000390654 ABCC1P33527 1531 aa27.14■■□□□ 1.94
COL23A1-201ENST00000390654 TRMT2AQ8IZ69 625 aaKnown RBP27.14■■□□□ 1.94
COL23A1-201ENST00000390654 CLUAP1Q96AJ1 413 aa27.13■■□□□ 1.93
COL23A1-201ENST00000390654 NKTRP30414 1462 aaKnown RBP27.13■■□□□ 1.93
COL23A1-201ENST00000390654 RNF17Q9BXT8 1623 aaKnown RBP27.12■■□□□ 1.93
COL23A1-201ENST00000390654 SLC12A5Q9H2X9 1139 aa27.12■■□□□ 1.93
COL23A1-201ENST00000390654 CENPJQ9HC77 1338 aaPredicted RBP27.12■■□□□ 1.93
COL23A1-201ENST00000390654 PIK3C2GO75747 1445 aa27.11■■□□□ 1.93
COL23A1-201ENST00000390654 EIF3AQ14152 1382 aaKnown RBP27.11■■□□□ 1.93
COL23A1-201ENST00000390654 WWC1Q8IX03 1113 aa27.11■■□□□ 1.93
COL23A1-201ENST00000390654 SHROOM2Q13796 1616 aa27.1■■□□□ 1.93
COL23A1-201ENST00000390654 CFAP65Q6ZU64 1925 aaKnown RBP27.1■■□□□ 1.93
COL23A1-201ENST00000390654 FANCAO15360 1455 aa27.1■■□□□ 1.93
COL23A1-201ENST00000390654 MORC1Q86VD1 984 aa27.09■■□□□ 1.93
COL23A1-201ENST00000390654 CLTCL1P53675 1640 aa27.08■■□□□ 1.93
COL23A1-201ENST00000390654 IQGAP1P46940 1657 aa27.06■■□□□ 1.92
COL23A1-201ENST00000390654 SLKQ9H2G2 1235 aaPredicted RBP27.06■■□□□ 1.92
COL23A1-201ENST00000390654 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.06■■□□□ 1.92
COL23A1-201ENST00000390654 SYNMO15061 1565 aa27.06■■□□□ 1.92
COL23A1-201ENST00000390654 ADGRL1O94910 1474 aa27.04■■□□□ 1.92
COL23A1-201ENST00000390654 TCP11L2Q8N4U5 519 aa27.03■■□□□ 1.92
COL23A1-201ENST00000390654 ERVK-7P63135 1459 aa27.02■■□□□ 1.92
COL23A1-201ENST00000390654 TRPM2O94759 1503 aa27.02■■□□□ 1.92
COL23A1-201ENST00000390654 ZFYVE16Q7Z3T8 1539 aa27.02■■□□□ 1.92
COL23A1-201ENST00000390654 RLBP1P12271 317 aa27.02■■□□□ 1.92
COL23A1-201ENST00000390654 PTPRTO14522 1441 aa27■■□□□ 1.91
COL23A1-201ENST00000390654 MYOM1P52179 1685 aa26.99■■□□□ 1.91
COL23A1-201ENST00000390654 CGNL1Q0VF96 1302 aa26.99■■□□□ 1.91
COL23A1-201ENST00000390654 MTHFSP49914 203 aa26.98■■□□□ 1.91
COL23A1-201ENST00000390654 SPRYD3Q8NCJ5 442 aa26.98■■□□□ 1.91
COL23A1-201ENST00000390654 PCDHB15Q9Y5E8 787 aa26.98■■□□□ 1.91
COL23A1-201ENST00000390654 NSD3Q9BZ95 1437 aa26.98■■□□□ 1.91
COL23A1-201ENST00000390654 STK26Q9P289 416 aa26.98■■□□□ 1.91
COL23A1-201ENST00000390654 USP19O94966 1318 aa26.98■■□□□ 1.91
COL23A1-201ENST00000390654 ARXQ96QS3 562 aa26.97■■□□□ 1.91
COL23A1-201ENST00000390654 NOS1P29475 1434 aa26.96■■□□□ 1.91
COL23A1-201ENST00000390654 ATP7AQ04656 1500 aa26.96■■□□□ 1.91
COL23A1-201ENST00000390654 SPHKAPQ2M3C7 1700 aa26.96■■□□□ 1.91
COL23A1-201ENST00000390654 NPC1L1Q9UHC9 1359 aa26.96■■□□□ 1.91
COL23A1-201ENST00000390654 NPM1P06748 294 aaKnown RBP eCLIP26.96■■□□□ 1.91
COL23A1-201ENST00000390654 RARSP54136 660 aaKnown RBP26.96■■□□□ 1.91
COL23A1-201ENST00000390654 PDE3AQ14432 1141 aa26.96■■□□□ 1.91
COL23A1-201ENST00000390654 STAC3Q96MF2 364 aa26.94■■□□□ 1.9
COL23A1-201ENST00000390654 RAPGEF3O95398 923 aa26.93■■□□□ 1.9
COL23A1-201ENST00000390654 KDM5AP29375 1690 aaKnown RBP26.93■■□□□ 1.9
COL23A1-201ENST00000390654 PRKCSHP14314 528 aaPredicted RBP26.93■■□□□ 1.9
COL23A1-201ENST00000390654 RTEL1-TNFRSF6BF6WH68 1400 aa26.92■■□□□ 1.9
COL23A1-201ENST00000390654 RUNDC1Q96C34 613 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms