RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 CLTCL1P53675 1640 aa13.99□□□□□ -0.17
TRBV20-1-201ENST00000390394 LTBP4Q8N2S1 1624 aa13.97□□□□□ -0.17
TRBV20-1-201ENST00000390394 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
TRBV20-1-201ENST00000390394 TIMELESSQ9UNS1 1208 aa13.97□□□□□ -0.17
TRBV20-1-201ENST00000390394 UBR1Q8IWV7 1749 aa13.96□□□□□ -0.17
TRBV20-1-201ENST00000390394 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.17
TRBV20-1-201ENST00000390394 NEUROD1Q13562 356 aa13.96□□□□□ -0.17
TRBV20-1-201ENST00000390394 TMEM131LA2VDJ0 1609 aa13.96□□□□□ -0.17
TRBV20-1-201ENST00000390394 TMEM2Q9UHN6 1383 aa13.96□□□□□ -0.18
TRBV20-1-201ENST00000390394 PPP1R15AO75807 674 aaPredicted RBP13.95□□□□□ -0.18
TRBV20-1-201ENST00000390394 TONSLQ96HA7 1378 aa13.95□□□□□ -0.18
TRBV20-1-201ENST00000390394 RGL3Q3MIN7 710 aa13.94□□□□□ -0.18
TRBV20-1-201ENST00000390394 SPATA31E1Q6ZUB1 1445 aa13.94□□□□□ -0.18
TRBV20-1-201ENST00000390394 SLIT1O75093 1534 aa13.94□□□□□ -0.18
TRBV20-1-201ENST00000390394 TXNDC2Q86VQ3 553 aa13.93□□□□□ -0.18
TRBV20-1-201ENST00000390394 SIN3AQ96ST3 1273 aa13.93□□□□□ -0.18
TRBV20-1-201ENST00000390394 ARHGAP23Q9P227 1491 aa13.93□□□□□ -0.18
TRBV20-1-201ENST00000390394 RIMS2Q9UQ26 1411 aa13.92□□□□□ -0.18
TRBV20-1-201ENST00000390394 ZFYVE9O95405 1425 aa13.9□□□□□ -0.18
TRBV20-1-201ENST00000390394 DCAF11Q8TEB1 546 aa13.9□□□□□ -0.18
TRBV20-1-201ENST00000390394 SCAF11Q99590 1463 aaKnown RBP13.9□□□□□ -0.18
TRBV20-1-201ENST00000390394 BCANQ96GW7 911 aa13.89□□□□□ -0.19
TRBV20-1-201ENST00000390394 MYO5BQ9ULV0 1848 aa13.87□□□□□ -0.19
TRBV20-1-201ENST00000390394 PLEKHG1Q9ULL1 1385 aa13.87□□□□□ -0.19
TRBV20-1-201ENST00000390394 NEXMIFQ5QGS0 1516 aa13.87□□□□□ -0.19
TRBV20-1-201ENST00000390394 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
TRBV20-1-201ENST00000390394 MYOM2P54296 1465 aa13.87□□□□□ -0.19
TRBV20-1-201ENST00000390394 LTKP29376 864 aa13.86□□□□□ -0.19
TRBV20-1-201ENST00000390394 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
TRBV20-1-201ENST00000390394 MED14O60244 1454 aa13.86□□□□□ -0.19
TRBV20-1-201ENST00000390394 NPHP4O75161 1426 aaPredicted RBP13.85□□□□□ -0.19
TRBV20-1-201ENST00000390394 PPLO60437 1756 aa13.85□□□□□ -0.19
TRBV20-1-201ENST00000390394 NCKAP5LQ9HCH0 1330 aa13.85□□□□□ -0.19
TRBV20-1-201ENST00000390394 POLR1AO95602 1720 aaPredicted RBP13.84□□□□□ -0.19
TRBV20-1-201ENST00000390394 ZEB1P37275 1124 aaPredicted RBP13.83□□□□□ -0.2
TRBV20-1-201ENST00000390394 IFT172Q9UG01 1749 aa13.82□□□□□ -0.2
TRBV20-1-201ENST00000390394 NUTM2DQ5VT03 806 aaPredicted RBP13.82□□□□□ -0.2
TRBV20-1-201ENST00000390394 TBX22Q9Y458 520 aa13.82□□□□□ -0.2
TRBV20-1-201ENST00000390394 DIP2AQ14689 1571 aa13.81□□□□□ -0.2
TRBV20-1-201ENST00000390394 ADGRF5Q8IZF2 1346 aa13.81□□□□□ -0.2
TRBV20-1-201ENST00000390394 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
TRBV20-1-201ENST00000390394 SETBP1Q9Y6X0 1596 aa13.8□□□□□ -0.2
TRBV20-1-201ENST00000390394 IQGAP1P46940 1657 aa13.8□□□□□ -0.2
TRBV20-1-201ENST00000390394 PIK3R4Q99570 1358 aa13.8□□□□□ -0.2
TRBV20-1-201ENST00000390394 PIK3C2GO75747 1445 aa13.8□□□□□ -0.2
TRBV20-1-201ENST00000390394 C14orf93Q9H972 538 aaKnown RBP13.79□□□□□ -0.2
TRBV20-1-201ENST00000390394 LAMC1P11047 1609 aa13.79□□□□□ -0.2
TRBV20-1-201ENST00000390394 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
TRBV20-1-201ENST00000390394 PRAG1Q86YV5 1406 aa13.78□□□□□ -0.2
TRBV20-1-201ENST00000390394 MED1Q15648 1581 aaPredicted RBP13.78□□□□□ -0.2
TRBV20-1-201ENST00000390394 SLC26A8Q96RN1 970 aa13.76□□□□□ -0.21
TRBV20-1-201ENST00000390394 ADAMTS13Q76LX8 1427 aa13.75□□□□□ -0.21
TRBV20-1-201ENST00000390394 ALKQ9UM73 1620 aa13.75□□□□□ -0.21
TRBV20-1-201ENST00000390394 KIAA1210Q9ULL0 1709 aa13.74□□□□□ -0.21
TRBV20-1-201ENST00000390394 CFAP70Q5T0N1 1121 aa13.74□□□□□ -0.21
TRBV20-1-201ENST00000390394 KCNA6P17658 529 aa13.73□□□□□ -0.21
TRBV20-1-201ENST00000390394 ROCK2O75116 1388 aaKnown RBP13.72□□□□□ -0.21
TRBV20-1-201ENST00000390394 NRXN3Q9Y4C0 1643 aa13.72□□□□□ -0.21
TRBV20-1-201ENST00000390394 ZNF335Q9H4Z2 1342 aaPredicted RBP13.71□□□□□ -0.21
TRBV20-1-201ENST00000390394 SENP3Q9H4L4 574 aaPredicted RBP13.71□□□□□ -0.21
TRBV20-1-201ENST00000390394 RALGAPBQ86X10 1494 aa13.7□□□□□ -0.22
TRBV20-1-201ENST00000390394 NBPF8Q3BBV2 869 aa13.7□□□□□ -0.22
TRBV20-1-201ENST00000390394 AMOTL2Q9Y2J4 779 aa13.7□□□□□ -0.22
TRBV20-1-201ENST00000390394 METP08581 1390 aa13.7□□□□□ -0.22
TRBV20-1-201ENST00000390394 LRPPRCP42704 1394 aaKnown RBP13.7□□□□□ -0.22
TRBV20-1-201ENST00000390394 SLC24A1O60721 1099 aa13.69□□□□□ -0.22
TRBV20-1-201ENST00000390394 SIRT1Q96EB6 747 aa13.69□□□□□ -0.22
TRBV20-1-201ENST00000390394 CARD11Q9BXL7 1154 aa13.69□□□□□ -0.22
TRBV20-1-201ENST00000390394 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
TRBV20-1-201ENST00000390394 ABCC11Q96J66 1382 aa13.69□□□□□ -0.22
TRBV20-1-201ENST00000390394 YTHDC2Q9H6S0 1430 aaKnown RBP13.68□□□□□ -0.22
TRBV20-1-201ENST00000390394 TMEM132EQ6IEE7 984 aa13.68□□□□□ -0.22
TRBV20-1-201ENST00000390394 GPRASP1Q5JY77 1395 aa13.68□□□□□ -0.22
TRBV20-1-201ENST00000390394 TRPM1Q7Z4N2 1603 aa13.68□□□□□ -0.22
TRBV20-1-201ENST00000390394 NKTRP30414 1462 aaKnown RBP13.67□□□□□ -0.22
TRBV20-1-201ENST00000390394 CPS1P31327 1500 aa13.67□□□□□ -0.22
TRBV20-1-201ENST00000390394 TECPR2O15040 1411 aa13.66□□□□□ -0.22
TRBV20-1-201ENST00000390394 HSPA1LP34931 641 aa13.66□□□□□ -0.22
TRBV20-1-201ENST00000390394 NBPF1Q3BBV0 1214 aa13.66□□□□□ -0.22
TRBV20-1-201ENST00000390394 STK26Q9P289 416 aa13.66□□□□□ -0.22
TRBV20-1-201ENST00000390394 SETD1AO15047 1707 aaKnown RBP13.66□□□□□ -0.22
TRBV20-1-201ENST00000390394 CHD2O14647 1828 aaKnown RBP13.66□□□□□ -0.22
TRBV20-1-201ENST00000390394 ADGRB1O14514 1584 aa13.66□□□□□ -0.22
TRBV20-1-201ENST00000390394 NWD1Q149M9 1564 aa13.66□□□□□ -0.22
TRBV20-1-201ENST00000390394 PTCH1Q13635 1447 aa13.65□□□□□ -0.22
TRBV20-1-201ENST00000390394 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
TRBV20-1-201ENST00000390394 POGKQ9P215 609 aa13.65□□□□□ -0.22
TRBV20-1-201ENST00000390394 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
TRBV20-1-201ENST00000390394 DLC1Q96QB1 1528 aa13.64□□□□□ -0.23
TRBV20-1-201ENST00000390394 PROSER2Q86WR7 435 aaPredicted RBP13.64□□□□□ -0.23
TRBV20-1-201ENST00000390394 TRAK1Q9UPV9 953 aa13.64□□□□□ -0.23
TRBV20-1-201ENST00000390394 TOM1O60784 492 aa13.63□□□□□ -0.23
TRBV20-1-201ENST00000390394 PTPRUQ92729 1446 aa13.63□□□□□ -0.23
TRBV20-1-201ENST00000390394 KNDC1Q76NI1 1749 aa13.62□□□□□ -0.23
TRBV20-1-201ENST00000390394 ASXL1Q8IXJ9 1541 aa13.62□□□□□ -0.23
TRBV20-1-201ENST00000390394 XRN1Q8IZH2 1706 aaKnown RBP13.61□□□□□ -0.23
TRBV20-1-201ENST00000390394 EIF4G2P78344 907 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRBV20-1-201ENST00000390394 C14orf37Q86TY3 774 aa13.61□□□□□ -0.23
TRBV20-1-201ENST00000390394 CENPJQ9HC77 1338 aaPredicted RBP13.61□□□□□ -0.23
TRBV20-1-201ENST00000390394 PRAM1Q96QH2 718 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms