RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 FRAT2O75474 233 aaPredicted RBP15.25■□□□□ 0.03
FANCA-202ENST00000389301 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
FANCA-202ENST00000389301 KIF3BO15066 747 aa15.25■□□□□ 0.03
FANCA-202ENST00000389301 ZKSCAN1P17029 563 aaPredicted RBP15.25■□□□□ 0.03
FANCA-202ENST00000389301 VPS37CA5D8V6 355 aaPredicted RBP15.25■□□□□ 0.03
FANCA-202ENST00000389301 AMPHP49418 695 aa15.25■□□□□ 0.03
FANCA-202ENST00000389301 SASS6Q6UVJ0 657 aa15.25■□□□□ 0.03
FANCA-202ENST00000389301 RUFY2Q8WXA3 655 aa15.25■□□□□ 0.03
FANCA-202ENST00000389301 ARGLU1Q9NWB6 273 aaPredicted RBP15.25■□□□□ 0.03
FANCA-202ENST00000389301 RAPGEF2Q9Y4G8 1499 aa15.24■□□□□ 0.03
FANCA-202ENST00000389301 CCDC18Q5T9S5 1454 aa15.24■□□□□ 0.03
FANCA-202ENST00000389301 CCDC144AA2RUR9 1427 aa15.24■□□□□ 0.03
FANCA-202ENST00000389301 INTS3Q68E01 1043 aaKnown RBP15.24■□□□□ 0.03
FANCA-202ENST00000389301 EFCAB2Q5VUJ9 269 aa15.24■□□□□ 0.03
FANCA-202ENST00000389301 RNF214Q8ND24 703 aa15.24■□□□□ 0.03
FANCA-202ENST00000389301 FBXW7Q969H0 707 aa15.24■□□□□ 0.03
FANCA-202ENST00000389301 LTV1Q96GA3 475 aaPredicted RBP15.24■□□□□ 0.03
FANCA-202ENST00000389301 LNPKQ9C0E8 428 aa15.24■□□□□ 0.03
FANCA-202ENST00000389301 MNS1Q8NEH6 495 aa15.23■□□□□ 0.03
FANCA-202ENST00000389301 CARMIL2Q6F5E8 1435 aa15.23■□□□□ 0.03
FANCA-202ENST00000389301 MARCH6O60337 910 aa15.23■□□□□ 0.03
FANCA-202ENST00000389301 SMC3Q9UQE7 1217 aa15.23■□□□□ 0.03
FANCA-202ENST00000389301 ERCC6Q03468 1493 aa15.23■□□□□ 0.03
FANCA-202ENST00000389301 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
FANCA-202ENST00000389301 PANK1Q8TE04 598 aa15.22■□□□□ 0.03
FANCA-202ENST00000389301 CCDC7Q96M83 1385 aa15.22■□□□□ 0.03
FANCA-202ENST00000389301 NOM1Q5C9Z4 860 aaKnown RBP15.21■□□□□ 0.03
FANCA-202ENST00000389301 IPO7O95373 1038 aaKnown RBP15.21■□□□□ 0.03
FANCA-202ENST00000389301 AKAP17AQ02040 695 aaKnown RBP15.21■□□□□ 0.03
FANCA-202ENST00000389301 PCMTD1Q96MG8 357 aaPredicted RBP15.21■□□□□ 0.03
FANCA-202ENST00000389301 CNTLNQ9NXG0 1405 aa15.21■□□□□ 0.03
FANCA-202ENST00000389301 CAVIN1Q6NZI2 390 aaKnown RBP15.2■□□□□ 0.02
FANCA-202ENST00000389301 API5Q9BZZ5 524 aaKnown RBP15.2■□□□□ 0.02
FANCA-202ENST00000389301 KIF7Q2M1P5 1343 aa15.2■□□□□ 0.02
FANCA-202ENST00000389301 NGDNQ8NEJ9 315 aaKnown RBP15.19■□□□□ 0.02
FANCA-202ENST00000389301 TRIM29Q14134 588 aa15.19■□□□□ 0.02
FANCA-202ENST00000389301 NGEFQ8N5V2 710 aa15.19■□□□□ 0.02
FANCA-202ENST00000389301 VPS53Q5VIR6 699 aa15.19■□□□□ 0.02
FANCA-202ENST00000389301 SYNE3Q6ZMZ3 975 aa15.18■□□□□ 0.02
FANCA-202ENST00000389301 RIPK4P57078 832 aa15.18■□□□□ 0.02
FANCA-202ENST00000389301 CPLX2Q6PUV4 134 aaKnown RBP15.18■□□□□ 0.02
FANCA-202ENST00000389301 ANKRD20A12PQ8NF67 263 aa15.18■□□□□ 0.02
FANCA-202ENST00000389301 CCDC173Q0VFZ6 552 aa15.18■□□□□ 0.02
FANCA-202ENST00000389301 CDC45O75419 566 aa15.17■□□□□ 0.02
FANCA-202ENST00000389301 IFIT2P09913 472 aaKnown RBP15.17■□□□□ 0.02
FANCA-202ENST00000389301 ACBD3Q9H3P7 528 aa15.17■□□□□ 0.02
FANCA-202ENST00000389301 PRM3Q9NNZ6 103 aa15.17■□□□□ 0.02
FANCA-202ENST00000389301 CPLX1O14810 134 aa15.17■□□□□ 0.02
FANCA-202ENST00000389301 FOSBP53539 338 aa15.17■□□□□ 0.02
FANCA-202ENST00000389301 CCDC73Q6ZRK6 1079 aa15.17■□□□□ 0.02
FANCA-202ENST00000389301 HSP90B2PQ58FF3 399 aa15.16■□□□□ 0.02
FANCA-202ENST00000389301 RUNDC1Q96C34 613 aa15.16■□□□□ 0.02
FANCA-202ENST00000389301 ROCK1Q13464 1354 aa15.16■□□□□ 0.02
FANCA-202ENST00000389301 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
FANCA-202ENST00000389301 RNF20Q5VTR2 975 aa15.16■□□□□ 0.02
FANCA-202ENST00000389301 RUFY1Q96T51 708 aa15.16■□□□□ 0.02
FANCA-202ENST00000389301 AK7Q96M32 723 aa15.16■□□□□ 0.02
FANCA-202ENST00000389301 HOOK1Q9UJC3 728 aaKnown RBP15.16■□□□□ 0.02
FANCA-202ENST00000389301 TDRD9Q8NDG6 1382 aaKnown RBP15.16■□□□□ 0.02
FANCA-202ENST00000389301 CCDC66A2RUB6 948 aa15.15■□□□□ 0.02
FANCA-202ENST00000389301 AAMPQ13685 434 aa15.15■□□□□ 0.02
FANCA-202ENST00000389301 RSPH4AQ5TD94 716 aa15.15■□□□□ 0.02
FANCA-202ENST00000389301 COG3Q96JB2 828 aa15.14■□□□□ 0.01
FANCA-202ENST00000389301 TSPY26PQ9H489 355 aa15.14■□□□□ 0.01
FANCA-202ENST00000389301 DIAPH1O60610 1272 aaKnown RBP15.14■□□□□ 0.01
FANCA-202ENST00000389301 C9orf78Q9NZ63 289 aaPredicted RBP15.14■□□□□ 0.01
FANCA-202ENST00000389301 EVC2Q86UK5 1308 aa15.14■□□□□ 0.01
FANCA-202ENST00000389301 NECTIN2Q92692 538 aa15.14■□□□□ 0.01
FANCA-202ENST00000389301 EIF2S2P20042 333 aaKnown RBP15.13■□□□□ 0.01
FANCA-202ENST00000389301 PRPF40AO75400 957 aaKnown RBP15.13■□□□□ 0.01
FANCA-202ENST00000389301 CWC15Q9P013 229 aaKnown RBP15.13■□□□□ 0.01
FANCA-202ENST00000389301 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
FANCA-202ENST00000389301 CALRP27797 417 aaKnown RBP15.12■□□□□ 0.01
FANCA-202ENST00000389301 WASHC2CQ9Y4E1 1318 aa15.12■□□□□ 0.01
FANCA-202ENST00000389301 MBD3O95983 291 aa15.12■□□□□ 0.01
FANCA-202ENST00000389301 LRRFIP1Q32MZ4 808 aaKnown RBP15.12■□□□□ 0.01
FANCA-202ENST00000389301 HMGN5P82970 282 aaKnown RBP15.12■□□□□ 0.01
FANCA-202ENST00000389301 TRIM5Q9C035 493 aa15.12■□□□□ 0.01
FANCA-202ENST00000389301 CCDC47Q96A33 483 aaKnown RBP15.11■□□□□ 0.01
FANCA-202ENST00000389301 LETM1O95202 739 aaPredicted RBP15.11■□□□□ 0.01
FANCA-202ENST00000389301 WASHC2AQ641Q2 1341 aa15.11■□□□□ 0.01
FANCA-202ENST00000389301 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.11■□□□□ 0.01
FANCA-202ENST00000389301 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
FANCA-202ENST00000389301 CCDC27Q2M243 656 aa15.11■□□□□ 0.01
FANCA-202ENST00000389301 BACH2Q9BYV9 841 aa15.11■□□□□ 0.01
FANCA-202ENST00000389301 NAT10Q9H0A0 1025 aaKnown RBP15.11■□□□□ 0.01
FANCA-202ENST00000389301 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
FANCA-202ENST00000389301 PDZRN3Q9UPQ7 1066 aa15.1■□□□□ 0.01
FANCA-202ENST00000389301 FKBP5Q13451 457 aaPredicted RBP15.1■□□□□ 0.01
FANCA-202ENST00000389301 PDILTQ8N807 584 aa15.1■□□□□ 0.01
FANCA-202ENST00000389301 BRD4O60885 1362 aaPredicted RBP15.1■□□□□ 0.01
FANCA-202ENST00000389301 NEXNQ0ZGT2 675 aa15.1■□□□□ 0.01
FANCA-202ENST00000389301 GRPEL1Q9HAV7 217 aa15.1■□□□□ 0.01
FANCA-202ENST00000389301 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.1■□□□□ 0.01
FANCA-202ENST00000389301 APPP05067 770 aa15.09■□□□□ 0.01
FANCA-202ENST00000389301 TMX4Q9H1E5 349 aaPredicted RBP15.09■□□□□ 0.01
FANCA-202ENST00000389301 PRKCSHP14314 528 aaPredicted RBP15.09■□□□□ 0.01
FANCA-202ENST00000389301 ADAMTS8Q9UP79 889 aa15.09■□□□□ 0.01
FANCA-202ENST00000389301 AKNAQ7Z591 1439 aa15.09■□□□□ 0.01
FANCA-202ENST00000389301 CDR1P51861 262 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms