RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 BLMP54132 1417 aaPredicted RBP20.04■□□□□ 0.8
SCFD2-201ENST00000388940 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
SCFD2-201ENST00000388940 EIF3AQ14152 1382 aaKnown RBP20.04■□□□□ 0.8
SCFD2-201ENST00000388940 MYT1LQ9UL68 1186 aa20.03■□□□□ 0.8
SCFD2-201ENST00000388940 PPRC1Q5VV67 1664 aaKnown RBP20.03■□□□□ 0.8
SCFD2-201ENST00000388940 SLC24A1O60721 1099 aa20.02■□□□□ 0.8
SCFD2-201ENST00000388940 NPM1P06748 294 aaKnown RBP eCLIP20.01■□□□□ 0.79
SCFD2-201ENST00000388940 FANCIQ9NVI1 1328 aa20.01■□□□□ 0.79
SCFD2-201ENST00000388940 MYOM1P52179 1685 aa20■□□□□ 0.79
SCFD2-201ENST00000388940 OSCARQ8IYS5 282 aa20■□□□□ 0.79
SCFD2-201ENST00000388940 ABCA6Q8N139 1617 aa20■□□□□ 0.79
SCFD2-201ENST00000388940 MLH3Q9UHC1 1453 aa20■□□□□ 0.79
SCFD2-201ENST00000388940 NRXN1Q9ULB1 1477 aa19.99■□□□□ 0.79
SCFD2-201ENST00000388940 KDM5AP29375 1690 aaKnown RBP19.99■□□□□ 0.79
SCFD2-201ENST00000388940 NPC1L1Q9UHC9 1359 aa19.98■□□□□ 0.79
SCFD2-201ENST00000388940 UGGT1Q9NYU2 1555 aa19.98■□□□□ 0.79
SCFD2-201ENST00000388940 KNSTRNQ9Y448 316 aa19.98■□□□□ 0.79
SCFD2-201ENST00000388940 POGZQ7Z3K3 1410 aa19.98■□□□□ 0.79
SCFD2-201ENST00000388940 CD109Q6YHK3 1445 aa19.98■□□□□ 0.79
SCFD2-201ENST00000388940 MROH2AA6NES4 1674 aa19.97■□□□□ 0.79
SCFD2-201ENST00000388940 AMER1Q5JTC6 1135 aaPredicted RBP19.96■□□□□ 0.79
SCFD2-201ENST00000388940 ASXL1Q8IXJ9 1541 aa19.96■□□□□ 0.79
SCFD2-201ENST00000388940 SENP3-EIF4A1A0A087X0R7 540 aa19.96■□□□□ 0.79
SCFD2-201ENST00000388940 ADGRB3O60242 1522 aa19.95■□□□□ 0.78
SCFD2-201ENST00000388940 HECW2Q9P2P5 1572 aa19.95■□□□□ 0.78
SCFD2-201ENST00000388940 MYO3AQ8NEV4 1616 aa19.95■□□□□ 0.78
SCFD2-201ENST00000388940 FRMPD1Q5SYB0 1578 aa19.95■□□□□ 0.78
SCFD2-201ENST00000388940 RRP1P56182 461 aaKnown RBP19.94■□□□□ 0.78
SCFD2-201ENST00000388940 RCAN3Q9UKA8 241 aa19.94■□□□□ 0.78
SCFD2-201ENST00000388940 SETBP1Q9Y6X0 1596 aa19.93■□□□□ 0.78
SCFD2-201ENST00000388940 PPP2R1AP30153 589 aa19.93■□□□□ 0.78
SCFD2-201ENST00000388940 CCDC136Q96JN2 1154 aa19.93■□□□□ 0.78
SCFD2-201ENST00000388940 ADGRF5Q8IZF2 1346 aa19.93■□□□□ 0.78
SCFD2-201ENST00000388940 CFAP70Q5T0N1 1121 aa19.92■□□□□ 0.78
SCFD2-201ENST00000388940 PIK3C2GO75747 1445 aa19.91■□□□□ 0.78
SCFD2-201ENST00000388940 SBNO2Q9Y2G9 1366 aa19.91■□□□□ 0.78
SCFD2-201ENST00000388940 ERVK-7P63135 1459 aa19.91■□□□□ 0.78
SCFD2-201ENST00000388940 PRKCSHP14314 528 aaPredicted RBP19.91■□□□□ 0.78
SCFD2-201ENST00000388940 PPLO60437 1756 aa19.9■□□□□ 0.78
SCFD2-201ENST00000388940 NEO1Q92859 1461 aa19.89■□□□□ 0.78
SCFD2-201ENST00000388940 NPATQ14207 1427 aa19.89■□□□□ 0.77
SCFD2-201ENST00000388940 SALL2Q9Y467 1007 aaPredicted RBP19.87■□□□□ 0.77
SCFD2-201ENST00000388940 ADAMTS8Q9UP79 889 aa19.87■□□□□ 0.77
SCFD2-201ENST00000388940 CDCA7LQ96GN5 454 aa19.86■□□□□ 0.77
SCFD2-201ENST00000388940 NOS1P29475 1434 aa19.86■□□□□ 0.77
SCFD2-201ENST00000388940 ABCC3O15438 1527 aa19.85■□□□□ 0.77
SCFD2-201ENST00000388940 RPGRIP1LQ68CZ1 1315 aa19.85■□□□□ 0.77
SCFD2-201ENST00000388940 MSH5O43196 834 aa19.84■□□□□ 0.77
SCFD2-201ENST00000388940 WDR43Q15061 677 aaKnown RBP eCLIP19.83■□□□□ 0.77
SCFD2-201ENST00000388940 CAMSAP1Q5T5Y3 1602 aa19.83■□□□□ 0.77
SCFD2-201ENST00000388940 CFAP65Q6ZU64 1925 aaKnown RBP19.83■□□□□ 0.77
SCFD2-201ENST00000388940 ZC3H13Q5T200 1668 aaKnown RBP19.82■□□□□ 0.76
SCFD2-201ENST00000388940 C14orf93Q9H972 538 aaKnown RBP19.82■□□□□ 0.76
SCFD2-201ENST00000388940 PIK3C2BO00750 1634 aa19.81■□□□□ 0.76
SCFD2-201ENST00000388940 GGT6Q6P531 493 aa19.8■□□□□ 0.76
SCFD2-201ENST00000388940 ADGRB1O14514 1584 aa19.8■□□□□ 0.76
SCFD2-201ENST00000388940 EXOC6Q8TAG9 804 aa19.8■□□□□ 0.76
SCFD2-201ENST00000388940 CENPJQ9HC77 1338 aaPredicted RBP19.8■□□□□ 0.76
SCFD2-201ENST00000388940 ZNF521Q96K83 1311 aa19.79■□□□□ 0.76
SCFD2-201ENST00000388940 DIP2CQ9Y2E4 1556 aa19.79■□□□□ 0.76
SCFD2-201ENST00000388940 SIGLEC1Q9BZZ2 1709 aa19.78■□□□□ 0.76
SCFD2-201ENST00000388940 QRICH2Q9H0J4 1663 aa19.78■□□□□ 0.76
SCFD2-201ENST00000388940 RICTORQ6R327 1708 aa19.78■□□□□ 0.76
SCFD2-201ENST00000388940 ERICH6Q7L0X2 663 aa19.78■□□□□ 0.76
SCFD2-201ENST00000388940 ARHGAP31Q2M1Z3 1444 aa19.77■□□□□ 0.76
SCFD2-201ENST00000388940 CARD14Q9BXL6 1004 aa19.77■□□□□ 0.76
SCFD2-201ENST00000388940 PLEKHH1Q9ULM0 1364 aa19.77■□□□□ 0.75
SCFD2-201ENST00000388940 CHGAP10645 457 aaKnown RBP19.76■□□□□ 0.75
SCFD2-201ENST00000388940 DUSP27Q5VZP5 1158 aa19.73■□□□□ 0.75
SCFD2-201ENST00000388940 PUS7Q96PZ0 661 aaKnown RBP19.72■□□□□ 0.75
SCFD2-201ENST00000388940 NEXMIFQ5QGS0 1516 aa19.72■□□□□ 0.75
SCFD2-201ENST00000388940 RAPGEF3O95398 923 aa19.72■□□□□ 0.75
SCFD2-201ENST00000388940 GOLGA2Q08379 1002 aa19.72■□□□□ 0.75
SCFD2-201ENST00000388940 NGEFQ8N5V2 710 aa19.72■□□□□ 0.75
SCFD2-201ENST00000388940 USP32Q8NFA0 1604 aa19.71■□□□□ 0.75
SCFD2-201ENST00000388940 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
SCFD2-201ENST00000388940 GLI2P10070 1586 aa19.7■□□□□ 0.74
SCFD2-201ENST00000388940 TRAK1Q9UPV9 953 aa19.7■□□□□ 0.74
SCFD2-201ENST00000388940 VGFO15240 615 aaPredicted RBP19.69■□□□□ 0.74
SCFD2-201ENST00000388940 TRMT2AQ8IZ69 625 aaKnown RBP19.69■□□□□ 0.74
SCFD2-201ENST00000388940 ZFYVE9O95405 1425 aa19.69■□□□□ 0.74
SCFD2-201ENST00000388940 TCERG1O14776 1098 aaKnown RBP19.68■□□□□ 0.74
SCFD2-201ENST00000388940 SLFN5Q08AF3 891 aa19.68■□□□□ 0.74
SCFD2-201ENST00000388940 ARHGEF28Q8N1W1 1705 aaKnown RBP19.68■□□□□ 0.74
SCFD2-201ENST00000388940 PLIN1O60240 522 aa19.67■□□□□ 0.74
SCFD2-201ENST00000388940 NSD3Q9BZ95 1437 aa19.66■□□□□ 0.74
SCFD2-201ENST00000388940 TMEM132EQ6IEE7 984 aa19.65■□□□□ 0.74
SCFD2-201ENST00000388940 CRBNQ96SW2 442 aa19.65■□□□□ 0.74
SCFD2-201ENST00000388940 SLC52A1Q9NWF4 448 aa19.65■□□□□ 0.74
SCFD2-201ENST00000388940 MS4A1P11836 297 aa19.63■□□□□ 0.73
SCFD2-201ENST00000388940 SHPRHQ149N8 1683 aa19.63■□□□□ 0.73
SCFD2-201ENST00000388940 YEATS2Q9ULM3 1422 aa19.63■□□□□ 0.73
SCFD2-201ENST00000388940 SLC12A5Q9H2X9 1139 aa19.63■□□□□ 0.73
SCFD2-201ENST00000388940 PREX1Q8TCU6 1659 aa19.62■□□□□ 0.73
SCFD2-201ENST00000388940 APAF1O14727 1248 aa19.62■□□□□ 0.73
SCFD2-201ENST00000388940 CCDC146Q8IYE0 955 aa19.62■□□□□ 0.73
SCFD2-201ENST00000388940 IDI1Q13907 227 aa19.61■□□□□ 0.73
SCFD2-201ENST00000388940 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.61■□□□□ 0.73
SCFD2-201ENST00000388940 EVC2Q86UK5 1308 aa19.61■□□□□ 0.73
SCFD2-201ENST00000388940 TULP4Q9NRJ4 1543 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms