RNA–Protein interactions for RNA: ENST00000388782.8

GKAP1-204, Transcript of G kinase anchoring protein 1, humanhuman

TSL 2

Gene GKAP1, Length 1,231 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKAP1-204ENST00000388782 RIMS2Q9UQ26 1411 aa35.89■■■■□ 3.34
GKAP1-204ENST00000388782 NEXMIFQ5QGS0 1516 aa35.88■■■■□ 3.33
GKAP1-204ENST00000388782 HDGFP51858 240 aaKnown RBP35.87■■■■□ 3.33
GKAP1-204ENST00000388782 RGL3Q3MIN7 710 aa35.87■■■■□ 3.33
GKAP1-204ENST00000388782 DMRT2Q9Y5R5 561 aa35.86■■■■□ 3.33
GKAP1-204ENST00000388782 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.85■■■■□ 3.33
GKAP1-204ENST00000388782 EID1Q9Y6B2 187 aa35.85■■■■□ 3.33
GKAP1-204ENST00000388782 PPLO60437 1756 aa35.84■■■■□ 3.33
GKAP1-204ENST00000388782 POLR1AO95602 1720 aaPredicted RBP35.84■■■■□ 3.33
GKAP1-204ENST00000388782 IFT172Q9UG01 1749 aa35.84■■■■□ 3.33
GKAP1-204ENST00000388782 SCAF11Q99590 1463 aaKnown RBP35.84■■■■□ 3.33
GKAP1-204ENST00000388782 ANKLE2Q86XL3 938 aa35.82■■■■□ 3.32
GKAP1-204ENST00000388782 TXNDC2Q86VQ3 553 aa35.79■■■■□ 3.32
GKAP1-204ENST00000388782 CERKQ8TCT0 537 aa35.79■■■■□ 3.32
GKAP1-204ENST00000388782 TONSLQ96HA7 1378 aa35.78■■■■□ 3.32
GKAP1-204ENST00000388782 PPP1R15AO75807 674 aaPredicted RBP35.77■■■■□ 3.32
GKAP1-204ENST00000388782 MYOM2P54296 1465 aa35.77■■■■□ 3.32
GKAP1-204ENST00000388782 VGFO15240 615 aaPredicted RBP35.75■■■■□ 3.31
GKAP1-204ENST00000388782 LTKP29376 864 aa35.75■■■■□ 3.31
GKAP1-204ENST00000388782 STAC3Q96MF2 364 aa35.75■■■■□ 3.31
GKAP1-204ENST00000388782 MED14O60244 1454 aa35.73■■■■□ 3.31
GKAP1-204ENST00000388782 STRCQ7RTU9 1775 aa35.73■■■■□ 3.31
GKAP1-204ENST00000388782 DCAF11Q8TEB1 546 aa35.71■■■■□ 3.31
GKAP1-204ENST00000388782 NCKAP5LQ9HCH0 1330 aa35.71■■■■□ 3.31
GKAP1-204ENST00000388782 PLEKHG1Q9ULL1 1385 aa35.71■■■■□ 3.31
GKAP1-204ENST00000388782 L3MBTL2Q969R5 705 aa35.7■■■■□ 3.31
GKAP1-204ENST00000388782 TIMELESSQ9UNS1 1208 aa35.7■■■■□ 3.31
GKAP1-204ENST00000388782 NUTM2DQ5VT03 806 aaPredicted RBP35.69■■■■□ 3.3
GKAP1-204ENST00000388782 NPHP4O75161 1426 aaPredicted RBP35.68■■■■□ 3.3
GKAP1-204ENST00000388782 IQGAP1P46940 1657 aa35.68■■■■□ 3.3
GKAP1-204ENST00000388782 NRXN1Q9ULB1 1477 aa35.66■■■■□ 3.3
GKAP1-204ENST00000388782 SETBP1Q9Y6X0 1596 aa35.65■■■■□ 3.3
GKAP1-204ENST00000388782 ADGRF5Q8IZF2 1346 aa35.62■■■■□ 3.29
GKAP1-204ENST00000388782 KDM2AQ9Y2K7 1162 aa35.62■■■■□ 3.29
GKAP1-204ENST00000388782 PIK3C2GO75747 1445 aa35.61■■■■□ 3.29
GKAP1-204ENST00000388782 DIP2AQ14689 1571 aa35.59■■■■□ 3.29
GKAP1-204ENST00000388782 BCANQ96GW7 911 aa35.59■■■■□ 3.29
GKAP1-204ENST00000388782 NRXN3Q9Y4C0 1643 aa35.58■■■■□ 3.29
GKAP1-204ENST00000388782 LAMC1P11047 1609 aa35.56■■■■□ 3.28
GKAP1-204ENST00000388782 PRAG1Q86YV5 1406 aa35.56■■■■□ 3.28
GKAP1-204ENST00000388782 ADAMTS13Q76LX8 1427 aa35.54■■■■□ 3.28
GKAP1-204ENST00000388782 ALKQ9UM73 1620 aa35.51■■■■□ 3.28
GKAP1-204ENST00000388782 SENP3Q9H4L4 574 aaPredicted RBP35.48■■■■□ 3.27
GKAP1-204ENST00000388782 TBX22Q9Y458 520 aa35.48■■■■□ 3.27
GKAP1-204ENST00000388782 SETD1AO15047 1707 aaKnown RBP35.47■■■■□ 3.27
GKAP1-204ENST00000388782 KIAA1210Q9ULL0 1709 aa35.47■■■■□ 3.27
GKAP1-204ENST00000388782 SLC26A8Q96RN1 970 aa35.46■■■■□ 3.27
GKAP1-204ENST00000388782 C14orf93Q9H972 538 aaKnown RBP35.44■■■■□ 3.26
GKAP1-204ENST00000388782 PIK3R4Q99570 1358 aa35.42■■■■□ 3.26
GKAP1-204ENST00000388782 TRPM1Q7Z4N2 1603 aa35.4■■■■□ 3.26
GKAP1-204ENST00000388782 CFAP70Q5T0N1 1121 aa35.39■■■■□ 3.26
GKAP1-204ENST00000388782 NBPF8Q3BBV2 869 aa35.37■■■■□ 3.25
GKAP1-204ENST00000388782 METP08581 1390 aa35.36■■■■□ 3.25
GKAP1-204ENST00000388782 ASXL1Q8IXJ9 1541 aa35.35■■■■□ 3.25
GKAP1-204ENST00000388782 RALGAPBQ86X10 1494 aa35.35■■■■□ 3.25
GKAP1-204ENST00000388782 ADGRB1O14514 1584 aa35.34■■■■□ 3.25
GKAP1-204ENST00000388782 NWD1Q149M9 1564 aa35.32■■■■□ 3.24
GKAP1-204ENST00000388782 CHD2O14647 1828 aaKnown RBP35.31■■■■□ 3.24
GKAP1-204ENST00000388782 ROCK2O75116 1388 aaKnown RBP35.28■■■■□ 3.24
GKAP1-204ENST00000388782 XRN1Q8IZH2 1706 aaKnown RBP35.27■■■■□ 3.24
GKAP1-204ENST00000388782 ZEB1P37275 1124 aaPredicted RBP35.27■■■■□ 3.24
GKAP1-204ENST00000388782 LTBP4Q8N2S1 1624 aa35.27■■■■□ 3.24
GKAP1-204ENST00000388782 LRPPRCP42704 1394 aaKnown RBP35.26■■■■□ 3.24
GKAP1-204ENST00000388782 PTPRUQ92729 1446 aa35.26■■■■□ 3.24
GKAP1-204ENST00000388782 YTHDC2Q9H6S0 1430 aaKnown RBP35.26■■■■□ 3.24
GKAP1-204ENST00000388782 KCNA6P17658 529 aa35.26■■■■□ 3.24
GKAP1-204ENST00000388782 IQSEC2Q5JU85 1478 aa35.26■■■■□ 3.23
GKAP1-204ENST00000388782 TMEM132EQ6IEE7 984 aa35.25■■■■□ 3.23
GKAP1-204ENST00000388782 GPRASP1Q5JY77 1395 aa35.25■■■■□ 3.23
GKAP1-204ENST00000388782 NKTRP30414 1462 aaKnown RBP35.24■■■■□ 3.23
GKAP1-204ENST00000388782 KNDC1Q76NI1 1749 aa35.24■■■■□ 3.23
GKAP1-204ENST00000388782 NBPF1Q3BBV0 1214 aa35.23■■■■□ 3.23
GKAP1-204ENST00000388782 ZNF335Q9H4Z2 1342 aaPredicted RBP35.23■■■■□ 3.23
GKAP1-204ENST00000388782 TECPR2O15040 1411 aa35.22■■■■□ 3.23
GKAP1-204ENST00000388782 AMOTL2Q9Y2J4 779 aa35.21■■■■□ 3.23
GKAP1-204ENST00000388782 ABCC11Q96J66 1382 aa35.2■■■■□ 3.23
GKAP1-204ENST00000388782 STRCP1A6NGW2 1772 aa35.2■■■■□ 3.23
GKAP1-204ENST00000388782 CPS1P31327 1500 aa35.19■■■■□ 3.22
GKAP1-204ENST00000388782 PTCH1Q13635 1447 aa35.19■■■■□ 3.22
GKAP1-204ENST00000388782 DLC1Q96QB1 1528 aa35.17■■■■□ 3.22
GKAP1-204ENST00000388782 CARD11Q9BXL7 1154 aa35.15■■■■□ 3.22
GKAP1-204ENST00000388782 STK26Q9P289 416 aa35.15■■■■□ 3.22
GKAP1-204ENST00000388782 FAM135BQ49AJ0 1406 aa35.11■■■■□ 3.21
GKAP1-204ENST00000388782 ARHGEF28Q8N1W1 1705 aaKnown RBP35.1■■■■□ 3.21
GKAP1-204ENST00000388782 SIRT1Q96EB6 747 aa35.1■■■■□ 3.21
GKAP1-204ENST00000388782 TRAK1Q9UPV9 953 aa35.1■■■■□ 3.21
GKAP1-204ENST00000388782 ROBO2Q9HCK4 1378 aa35.1■■■■□ 3.21
GKAP1-204ENST00000388782 EIF3AQ14152 1382 aaKnown RBP35.09■■■■□ 3.21
GKAP1-204ENST00000388782 DISP3Q9P2K9 1392 aa35.07■■■■□ 3.2
GKAP1-204ENST00000388782 PROSER2Q86WR7 435 aaPredicted RBP35.05■■■■□ 3.2
GKAP1-204ENST00000388782 LRRC7Q96NW7 1537 aa35.05■■■■□ 3.2
GKAP1-204ENST00000388782 NCOA3Q9Y6Q9 1424 aa35.03■■■■□ 3.2
GKAP1-204ENST00000388782 UBAP1LF5GYI3 381 aa35.01■■■■□ 3.2
GKAP1-204ENST00000388782 PRAM1Q96QH2 718 aa35■■■■□ 3.19
GKAP1-204ENST00000388782 TMEM94Q12767 1356 aa35■■■■□ 3.19
GKAP1-204ENST00000388782 POGKQ9P215 609 aa34.99■■■■□ 3.19
GKAP1-204ENST00000388782 USP47Q96K76 1375 aa34.99■■■■□ 3.19
GKAP1-204ENST00000388782 WAPLQ7Z5K2 1190 aa34.96■■■■□ 3.19
GKAP1-204ENST00000388782 CENPJQ9HC77 1338 aaPredicted RBP34.96■■■■□ 3.19
GKAP1-204ENST00000388782 PLEKHH1Q9ULM0 1364 aa34.96■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms