RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 HMOX1P09601 288 aa24.02■■□□□ 1.44
CSPG5-202ENST00000383738 EIF4G3O43432 1585 aaKnown RBP24.02■■□□□ 1.44
CSPG5-202ENST00000383738 IDI1Q13907 227 aa24.02■■□□□ 1.44
CSPG5-202ENST00000383738 PNNQ9H307 717 aaKnown RBP24.02■■□□□ 1.44
CSPG5-202ENST00000383738 CGNL1Q0VF96 1302 aa24.02■■□□□ 1.44
CSPG5-202ENST00000383738 CRBNQ96SW2 442 aa24■■□□□ 1.43
CSPG5-202ENST00000383738 RRP1P56182 461 aaKnown RBP23.99■■□□□ 1.43
CSPG5-202ENST00000383738 WAPLQ7Z5K2 1190 aa23.99■■□□□ 1.43
CSPG5-202ENST00000383738 COG3Q96JB2 828 aa23.99■■□□□ 1.43
CSPG5-202ENST00000383738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.99■■□□□ 1.43
CSPG5-202ENST00000383738 ADGRF5Q8IZF2 1346 aa23.98■■□□□ 1.43
CSPG5-202ENST00000383738 ADAMTS8Q9UP79 889 aa23.97■■□□□ 1.43
CSPG5-202ENST00000383738 USP35Q9P2H5 1018 aa23.97■■□□□ 1.43
CSPG5-202ENST00000383738 MTHFSP49914 203 aa23.97■■□□□ 1.43
CSPG5-202ENST00000383738 CDCA7LQ96GN5 454 aa23.96■■□□□ 1.43
CSPG5-202ENST00000383738 FANCAO15360 1455 aa23.95■■□□□ 1.43
CSPG5-202ENST00000383738 CABP1Q9NZU7 370 aa23.95■■□□□ 1.42
CSPG5-202ENST00000383738 ROCK1Q13464 1354 aa23.95■■□□□ 1.42
CSPG5-202ENST00000383738 ADAMTS12P58397 1594 aa23.95■■□□□ 1.42
CSPG5-202ENST00000383738 CCDC9Q9Y3X0 531 aaKnown RBP23.94■■□□□ 1.42
CSPG5-202ENST00000383738 ERBINQ96RT1 1412 aa23.94■■□□□ 1.42
CSPG5-202ENST00000383738 FRAT2O75474 233 aaPredicted RBP23.93■■□□□ 1.42
CSPG5-202ENST00000383738 SMC4Q9NTJ3 1288 aa23.93■■□□□ 1.42
CSPG5-202ENST00000383738 ASXL2Q76L83 1435 aa23.93■■□□□ 1.42
CSPG5-202ENST00000383738 PSME1Q06323 249 aa23.92■■□□□ 1.42
CSPG5-202ENST00000383738 ITPRIPQ8IWB1 547 aa23.92■■□□□ 1.42
CSPG5-202ENST00000383738 NECTIN2Q92692 538 aa23.91■■□□□ 1.42
CSPG5-202ENST00000383738 DISP1Q96F81 1524 aa23.91■■□□□ 1.42
CSPG5-202ENST00000383738 KIF14Q15058 1648 aa23.9■■□□□ 1.42
CSPG5-202ENST00000383738 MAP3K1Q13233 1512 aa23.9■■□□□ 1.42
CSPG5-202ENST00000383738 XPCQ01831 940 aaPredicted RBP23.9■■□□□ 1.42
CSPG5-202ENST00000383738 SLC52A1Q9NWF4 448 aa23.9■■□□□ 1.42
CSPG5-202ENST00000383738 SLC4A10Q6U841 1118 aa23.89■■□□□ 1.42
CSPG5-202ENST00000383738 TRAPPC8Q9Y2L5 1435 aa23.89■■□□□ 1.41
CSPG5-202ENST00000383738 CNTLNQ9NXG0 1405 aa23.88■■□□□ 1.41
CSPG5-202ENST00000383738 RAPGEF6Q8TEU7 1601 aa23.88■■□□□ 1.41
CSPG5-202ENST00000383738 NLRP6P59044 892 aa23.87■■□□□ 1.41
CSPG5-202ENST00000383738 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.87■■□□□ 1.41
CSPG5-202ENST00000383738 CDK19Q9BWU1 502 aa23.87■■□□□ 1.41
CSPG5-202ENST00000383738 WDR62O43379 1518 aa23.86■■□□□ 1.41
CSPG5-202ENST00000383738 FOXD4L1Q9NU39 408 aa23.86■■□□□ 1.41
CSPG5-202ENST00000383738 DIAPH1O60610 1272 aaKnown RBP23.84■■□□□ 1.41
CSPG5-202ENST00000383738 L1TD1Q5T7N2 865 aaKnown RBP23.84■■□□□ 1.41
CSPG5-202ENST00000383738 KIAA0556O60303 1618 aa23.83■■□□□ 1.4
CSPG5-202ENST00000383738 HSP90AA2PQ14568 343 aaPredicted RBP23.83■■□□□ 1.4
CSPG5-202ENST00000383738 PPP2R1AP30153 589 aa23.82■■□□□ 1.4
CSPG5-202ENST00000383738 OS9Q13438 667 aaPredicted RBP23.82■■□□□ 1.4
CSPG5-202ENST00000383738 ESCO1Q5FWF5 840 aa23.82■■□□□ 1.4
CSPG5-202ENST00000383738 TAOK2Q9UL54 1235 aa23.82■■□□□ 1.4
CSPG5-202ENST00000383738 RIPK4P57078 832 aa23.81■■□□□ 1.4
CSPG5-202ENST00000383738 AMER1Q5JTC6 1135 aaPredicted RBP23.81■■□□□ 1.4
CSPG5-202ENST00000383738 UGGT2Q9NYU1 1516 aa23.81■■□□□ 1.4
CSPG5-202ENST00000383738 DNTTIP2Q5QJE6 756 aaKnown RBP23.81■■□□□ 1.4
CSPG5-202ENST00000383738 FBLN1P23142 703 aa23.8■■□□□ 1.4
CSPG5-202ENST00000383738 COG6Q9Y2V7 657 aa23.8■■□□□ 1.4
CSPG5-202ENST00000383738 NUP160Q12769 1436 aa23.8■■□□□ 1.4
CSPG5-202ENST00000383738 PROSER2Q86WR7 435 aaPredicted RBP23.8■■□□□ 1.4
CSPG5-202ENST00000383738 GOLGA6L3A6NEY3 463 aa23.79■■□□□ 1.4
CSPG5-202ENST00000383738 RSPH6AQ9H0K4 717 aa23.79■■□□□ 1.4
CSPG5-202ENST00000383738 CTTNBP2Q8WZ74 1663 aa23.78■■□□□ 1.4
CSPG5-202ENST00000383738 THEMISQ8N1K5 641 aaPredicted RBP23.78■■□□□ 1.4
CSPG5-202ENST00000383738 SYCP2Q9BX26 1530 aa23.78■■□□□ 1.4
CSPG5-202ENST00000383738 MFAP1P55081 439 aaKnown RBP23.77■■□□□ 1.4
CSPG5-202ENST00000383738 NGEFQ8N5V2 710 aa23.77■■□□□ 1.4
CSPG5-202ENST00000383738 PLCH2O75038 1416 aa23.77■■□□□ 1.4
CSPG5-202ENST00000383738 HSP90AB1P08238 724 aaKnown RBP23.77■■□□□ 1.39
CSPG5-202ENST00000383738 FAM161AQ3B820 660 aa23.77■■□□□ 1.39
CSPG5-202ENST00000383738 NPHP1O15259 732 aa23.76■■□□□ 1.39
CSPG5-202ENST00000383738 ABTB2Q8N961 1025 aa23.76■■□□□ 1.39
CSPG5-202ENST00000383738 STAC3Q96MF2 364 aa23.76■■□□□ 1.39
CSPG5-202ENST00000383738 RRS1Q15050 365 aaKnown RBP23.76■■□□□ 1.39
CSPG5-202ENST00000383738 BACH2Q9BYV9 841 aa23.76■■□□□ 1.39
CSPG5-202ENST00000383738 ZNF428Q96B54 188 aa23.75■■□□□ 1.39
CSPG5-202ENST00000383738 ABCA5Q8WWZ7 1642 aa23.75■■□□□ 1.39
CSPG5-202ENST00000383738 PTMAP06454 111 aaKnown RBP23.75■■□□□ 1.39
CSPG5-202ENST00000383738 TCP11L2Q8N4U5 519 aa23.74■■□□□ 1.39
CSPG5-202ENST00000383738 PLCB2Q00722 1185 aa23.73■■□□□ 1.39
CSPG5-202ENST00000383738 DENND4BO75064 1496 aaPredicted RBP23.72■■□□□ 1.39
CSPG5-202ENST00000383738 EIF2S2P20042 333 aaKnown RBP23.72■■□□□ 1.39
CSPG5-202ENST00000383738 DHX29Q7Z478 1369 aaKnown RBP23.72■■□□□ 1.39
CSPG5-202ENST00000383738 TARBP1Q13395 1621 aaKnown RBP23.72■■□□□ 1.39
CSPG5-202ENST00000383738 ATF3P18847 181 aa23.72■■□□□ 1.39
CSPG5-202ENST00000383738 GOLGA6L22H0YM25 854 aa23.71■■□□□ 1.39
CSPG5-202ENST00000383738 PNISRQ8TF01 805 aaKnown RBP23.71■■□□□ 1.39
CSPG5-202ENST00000383738 MAPKBP1O60336 1514 aa23.7■■□□□ 1.38
CSPG5-202ENST00000383738 IPO8O15397 1037 aaKnown RBP23.7■■□□□ 1.38
CSPG5-202ENST00000383738 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
CSPG5-202ENST00000383738 PDE3BQ13370 1112 aa23.69■■□□□ 1.38
CSPG5-202ENST00000383738 HSCBQ8IWL3 235 aa23.69■■□□□ 1.38
CSPG5-202ENST00000383738 STK31Q9BXU1 1019 aa23.69■■□□□ 1.38
CSPG5-202ENST00000383738 MAGI3Q5TCQ9 1506 aa23.68■■□□□ 1.38
CSPG5-202ENST00000383738 MS4A1P11836 297 aa23.67■■□□□ 1.38
CSPG5-202ENST00000383738 PRKAR2BP31323 418 aa23.67■■□□□ 1.38
CSPG5-202ENST00000383738 NOS1P29475 1434 aa23.67■■□□□ 1.38
CSPG5-202ENST00000383738 RPRD2Q5VT52 1461 aaKnown RBP23.66■■□□□ 1.38
CSPG5-202ENST00000383738 PBRM1Q86U86 1689 aa23.66■■□□□ 1.38
CSPG5-202ENST00000383738 EVA1CP58658 441 aa23.66■■□□□ 1.38
CSPG5-202ENST00000383738 ANKLE2Q86XL3 938 aa23.66■■□□□ 1.38
CSPG5-202ENST00000383738 TSR2Q969E8 191 aaKnown RBP23.66■■□□□ 1.38
CSPG5-202ENST00000383738 NLRP2Q9NX02 1062 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms