RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 MED14O60244 1454 aa25.7■■□□□ 1.7
CD9-202ENST00000382515 SCAF11Q99590 1463 aaKnown RBP25.7■■□□□ 1.7
CD9-202ENST00000382515 CLTCL1P53675 1640 aa25.68■■□□□ 1.7
CD9-202ENST00000382515 RGL3Q3MIN7 710 aa25.68■■□□□ 1.7
CD9-202ENST00000382515 ZFYVE9O95405 1425 aa25.68■■□□□ 1.7
CD9-202ENST00000382515 NEURL4Q96JN8 1562 aa25.68■■□□□ 1.7
CD9-202ENST00000382515 SPATA31E1Q6ZUB1 1445 aa25.67■■□□□ 1.7
CD9-202ENST00000382515 CLSPNQ9HAW4 1339 aa25.66■■□□□ 1.7
CD9-202ENST00000382515 NPHP4O75161 1426 aaPredicted RBP25.65■■□□□ 1.7
CD9-202ENST00000382515 PLEKHG1Q9ULL1 1385 aa25.64■■□□□ 1.69
CD9-202ENST00000382515 BCANQ96GW7 911 aa25.62■■□□□ 1.69
CD9-202ENST00000382515 TBX22Q9Y458 520 aa25.61■■□□□ 1.69
CD9-202ENST00000382515 STRCQ7RTU9 1775 aa25.59■■□□□ 1.69
CD9-202ENST00000382515 KIF1BO60333 1816 aa25.59■■□□□ 1.69
CD9-202ENST00000382515 NUTM2DQ5VT03 806 aaPredicted RBP25.57■■□□□ 1.68
CD9-202ENST00000382515 SIN3AQ96ST3 1273 aa25.55■■□□□ 1.68
CD9-202ENST00000382515 NEUROD1Q13562 356 aa25.53■■□□□ 1.68
CD9-202ENST00000382515 DCAF11Q8TEB1 546 aa25.53■■□□□ 1.68
CD9-202ENST00000382515 SLC26A8Q96RN1 970 aa25.52■■□□□ 1.68
CD9-202ENST00000382515 NEXMIFQ5QGS0 1516 aa25.52■■□□□ 1.68
CD9-202ENST00000382515 CCER1Q8TC90 406 aaPredicted RBP25.51■■□□□ 1.67
CD9-202ENST00000382515 TIMELESSQ9UNS1 1208 aa25.51■■□□□ 1.67
CD9-202ENST00000382515 PIK3R4Q99570 1358 aa25.5■■□□□ 1.67
CD9-202ENST00000382515 POLR1AO95602 1720 aaPredicted RBP25.49■■□□□ 1.67
CD9-202ENST00000382515 ADGRF5Q8IZF2 1346 aa25.48■■□□□ 1.67
CD9-202ENST00000382515 KCNA6P17658 529 aa25.48■■□□□ 1.67
CD9-202ENST00000382515 L3MBTL2Q969R5 705 aa25.46■■□□□ 1.67
CD9-202ENST00000382515 MYO5BQ9ULV0 1848 aa25.46■■□□□ 1.67
CD9-202ENST00000382515 IQGAP1P46940 1657 aa25.45■■□□□ 1.67
CD9-202ENST00000382515 KDM2AQ9Y2K7 1162 aa25.45■■□□□ 1.66
CD9-202ENST00000382515 ADAMTS13Q76LX8 1427 aa25.45■■□□□ 1.66
CD9-202ENST00000382515 C14orf93Q9H972 538 aaKnown RBP25.44■■□□□ 1.66
CD9-202ENST00000382515 MYOM2P54296 1465 aa25.44■■□□□ 1.66
CD9-202ENST00000382515 SETBP1Q9Y6X0 1596 aa25.43■■□□□ 1.66
CD9-202ENST00000382515 ZNF335Q9H4Z2 1342 aaPredicted RBP25.42■■□□□ 1.66
CD9-202ENST00000382515 TONSLQ96HA7 1378 aa25.41■■□□□ 1.66
CD9-202ENST00000382515 NRXN1Q9ULB1 1477 aa25.4■■□□□ 1.66
CD9-202ENST00000382515 DIP2AQ14689 1571 aa25.4■■□□□ 1.66
CD9-202ENST00000382515 PIK3C2GO75747 1445 aa25.39■■□□□ 1.66
CD9-202ENST00000382515 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
CD9-202ENST00000382515 AMOTL2Q9Y2J4 779 aa25.37■■□□□ 1.65
CD9-202ENST00000382515 PPLO60437 1756 aa25.36■■□□□ 1.65
CD9-202ENST00000382515 METP08581 1390 aa25.34■■□□□ 1.65
CD9-202ENST00000382515 CFAP70Q5T0N1 1121 aa25.34■■□□□ 1.65
CD9-202ENST00000382515 CPS1P31327 1500 aa25.33■■□□□ 1.65
CD9-202ENST00000382515 CERKQ8TCT0 537 aa25.33■■□□□ 1.65
CD9-202ENST00000382515 ALKQ9UM73 1620 aa25.31■■□□□ 1.64
CD9-202ENST00000382515 ILDR1Q86SU0 546 aaPredicted RBP25.31■■□□□ 1.64
CD9-202ENST00000382515 PROSER2Q86WR7 435 aaPredicted RBP25.31■■□□□ 1.64
CD9-202ENST00000382515 SIRT1Q96EB6 747 aa25.31■■□□□ 1.64
CD9-202ENST00000382515 LTBP4Q8N2S1 1624 aa25.29■■□□□ 1.64
CD9-202ENST00000382515 IFT172Q9UG01 1749 aa25.29■■□□□ 1.64
CD9-202ENST00000382515 NCOA3Q9Y6Q9 1424 aa25.29■■□□□ 1.64
CD9-202ENST00000382515 ABCC11Q96J66 1382 aa25.28■■□□□ 1.64
CD9-202ENST00000382515 PRAG1Q86YV5 1406 aa25.28■■□□□ 1.64
CD9-202ENST00000382515 NRXN3Q9Y4C0 1643 aa25.27■■□□□ 1.64
CD9-202ENST00000382515 TMEM132EQ6IEE7 984 aa25.26■■□□□ 1.63
CD9-202ENST00000382515 LRPPRCP42704 1394 aaKnown RBP25.26■■□□□ 1.63
CD9-202ENST00000382515 NKTRP30414 1462 aaKnown RBP25.26■■□□□ 1.63
CD9-202ENST00000382515 PTPRUQ92729 1446 aa25.25■■□□□ 1.63
CD9-202ENST00000382515 IQSEC2Q5JU85 1478 aa25.24■■□□□ 1.63
CD9-202ENST00000382515 NWD1Q149M9 1564 aa25.21■■□□□ 1.63
CD9-202ENST00000382515 STK26Q9P289 416 aa25.2■■□□□ 1.62
CD9-202ENST00000382515 LRRC7Q96NW7 1537 aa25.2■■□□□ 1.62
CD9-202ENST00000382515 YTHDC2Q9H6S0 1430 aaKnown RBP25.2■■□□□ 1.62
CD9-202ENST00000382515 TMEM94Q12767 1356 aa25.19■■□□□ 1.62
CD9-202ENST00000382515 C19orf44Q9H6X5 657 aa25.19■■□□□ 1.62
CD9-202ENST00000382515 TECPR2O15040 1411 aa25.19■■□□□ 1.62
CD9-202ENST00000382515 LAMC1P11047 1609 aa25.19■■□□□ 1.62
CD9-202ENST00000382515 NBPF8Q3BBV2 869 aa25.18■■□□□ 1.62
CD9-202ENST00000382515 CHD2O14647 1828 aaKnown RBP25.18■■□□□ 1.62
CD9-202ENST00000382515 PTCH1Q13635 1447 aa25.18■■□□□ 1.62
CD9-202ENST00000382515 NBPF1Q3BBV0 1214 aa25.17■■□□□ 1.62
CD9-202ENST00000382515 FAM135BQ49AJ0 1406 aa25.15■■□□□ 1.62
CD9-202ENST00000382515 TOM1O60784 492 aa25.15■■□□□ 1.62
CD9-202ENST00000382515 C14orf37Q86TY3 774 aa25.14■■□□□ 1.62
CD9-202ENST00000382515 TRAK1Q9UPV9 953 aa25.13■■□□□ 1.61
CD9-202ENST00000382515 ROBO2Q9HCK4 1378 aa25.13■■□□□ 1.61
CD9-202ENST00000382515 ROCK2O75116 1388 aaKnown RBP25.12■■□□□ 1.61
CD9-202ENST00000382515 MSH6P52701 1360 aa25.12■■□□□ 1.61
CD9-202ENST00000382515 ADGRB1O14514 1584 aa25.12■■□□□ 1.61
CD9-202ENST00000382515 SETD1AO15047 1707 aaKnown RBP25.12■■□□□ 1.61
CD9-202ENST00000382515 CADPS2Q86UW7 1296 aa25.11■■□□□ 1.61
CD9-202ENST00000382515 POGKQ9P215 609 aa25.11■■□□□ 1.61
CD9-202ENST00000382515 GPRASP1Q5JY77 1395 aa25.1■■□□□ 1.61
CD9-202ENST00000382515 KIAA1210Q9ULL0 1709 aa25.1■■□□□ 1.61
CD9-202ENST00000382515 ATF3P18847 181 aa25.09■■□□□ 1.61
CD9-202ENST00000382515 RBM33Q96EV2 1170 aaKnown RBP25.09■■□□□ 1.61
CD9-202ENST00000382515 XRN1Q8IZH2 1706 aaKnown RBP25.09■■□□□ 1.61
CD9-202ENST00000382515 STRCP1A6NGW2 1772 aa25.08■■□□□ 1.61
CD9-202ENST00000382515 ASXL1Q8IXJ9 1541 aa25.08■■□□□ 1.61
CD9-202ENST00000382515 WAPLQ7Z5K2 1190 aa25.08■■□□□ 1.61
CD9-202ENST00000382515 PRAM1Q96QH2 718 aa25.08■■□□□ 1.61
CD9-202ENST00000382515 CARD11Q9BXL7 1154 aa25.08■■□□□ 1.61
CD9-202ENST00000382515 DLC1Q96QB1 1528 aa25.07■■□□□ 1.6
CD9-202ENST00000382515 UBAP1LF5GYI3 381 aa25.06■■□□□ 1.6
CD9-202ENST00000382515 SLC24A1O60721 1099 aa25.05■■□□□ 1.6
CD9-202ENST00000382515 FBXO41Q8TF61 875 aa25.05■■□□□ 1.6
CD9-202ENST00000382515 DCCP43146 1447 aa25.04■■□□□ 1.6
CD9-202ENST00000382515 ADGRL3Q9HAR2 1447 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms