RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 BCANQ96GW7 911 aa21.66■■□□□ 1.06
SHOX-202ENST00000381575 NUP155O75694 1391 aa21.66■■□□□ 1.06
SHOX-202ENST00000381575 MED1Q15648 1581 aaPredicted RBP21.66■■□□□ 1.06
SHOX-202ENST00000381575 ZFYVE9O95405 1425 aa21.65■■□□□ 1.06
SHOX-202ENST00000381575 CHGAP10645 457 aaKnown RBP21.65■■□□□ 1.06
SHOX-202ENST00000381575 RIMS2Q9UQ26 1411 aa21.65■■□□□ 1.06
SHOX-202ENST00000381575 RBM33Q96EV2 1170 aaKnown RBP21.64■■□□□ 1.06
SHOX-202ENST00000381575 TMEM94Q12767 1356 aa21.62■■□□□ 1.05
SHOX-202ENST00000381575 NUTM2DQ5VT03 806 aaPredicted RBP21.61■■□□□ 1.05
SHOX-202ENST00000381575 NWD1Q149M9 1564 aa21.61■■□□□ 1.05
SHOX-202ENST00000381575 PPP1R15AO75807 674 aaPredicted RBP21.61■■□□□ 1.05
SHOX-202ENST00000381575 CHD2O14647 1828 aaKnown RBP21.6■■□□□ 1.05
SHOX-202ENST00000381575 KCNA6P17658 529 aa21.6■■□□□ 1.05
SHOX-202ENST00000381575 SPHKAPQ2M3C7 1700 aa21.6■■□□□ 1.05
SHOX-202ENST00000381575 PROSER2Q86WR7 435 aaPredicted RBP21.59■■□□□ 1.05
SHOX-202ENST00000381575 PLEKHG1Q9ULL1 1385 aa21.58■■□□□ 1.05
SHOX-202ENST00000381575 RRBP1Q9P2E9 1410 aaKnown RBP21.58■■□□□ 1.05
SHOX-202ENST00000381575 NKTRP30414 1462 aaKnown RBP21.56■■□□□ 1.04
SHOX-202ENST00000381575 SOCS7O14512 581 aa21.55■■□□□ 1.04
SHOX-202ENST00000381575 ROBO1Q9Y6N7 1651 aa21.53■■□□□ 1.04
SHOX-202ENST00000381575 NAIPQ13075 1403 aa21.51■■□□□ 1.03
SHOX-202ENST00000381575 ADAMTS13Q76LX8 1427 aa21.5■■□□□ 1.03
SHOX-202ENST00000381575 HDGFP51858 240 aaKnown RBP21.5■■□□□ 1.03
SHOX-202ENST00000381575 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.49■■□□□ 1.03
SHOX-202ENST00000381575 CLTCL1P53675 1640 aa21.49■■□□□ 1.03
SHOX-202ENST00000381575 DIP2AQ14689 1571 aa21.48■■□□□ 1.03
SHOX-202ENST00000381575 FAM135BQ49AJ0 1406 aa21.46■■□□□ 1.03
SHOX-202ENST00000381575 MSH6P52701 1360 aa21.46■■□□□ 1.03
SHOX-202ENST00000381575 TBX22Q9Y458 520 aa21.46■■□□□ 1.03
SHOX-202ENST00000381575 NRXN3Q9Y4C0 1643 aa21.46■■□□□ 1.03
SHOX-202ENST00000381575 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
SHOX-202ENST00000381575 KIF1BO60333 1816 aa21.44■■□□□ 1.02
SHOX-202ENST00000381575 ZNF326Q5BKZ1 582 aaKnown RBP21.44■■□□□ 1.02
SHOX-202ENST00000381575 TRPM2O94759 1503 aa21.43■■□□□ 1.02
SHOX-202ENST00000381575 PTPRUQ92729 1446 aa21.42■■□□□ 1.02
SHOX-202ENST00000381575 PHLPP1O60346 1717 aa21.41■■□□□ 1.02
SHOX-202ENST00000381575 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.41■■□□□ 1.02
SHOX-202ENST00000381575 TRIM52Q96A61 297 aa21.41■■□□□ 1.02
SHOX-202ENST00000381575 HFM1A2PYH4 1435 aa21.41■■□□□ 1.02
SHOX-202ENST00000381575 C14orf37Q86TY3 774 aa21.4■■□□□ 1.02
SHOX-202ENST00000381575 SETBP1Q9Y6X0 1596 aa21.39■■□□□ 1.02
SHOX-202ENST00000381575 NEXMIFQ5QGS0 1516 aa21.39■■□□□ 1.01
SHOX-202ENST00000381575 SLAIN2Q9P270 581 aa21.38■■□□□ 1.01
SHOX-202ENST00000381575 XRN1Q8IZH2 1706 aaKnown RBP21.38■■□□□ 1.01
SHOX-202ENST00000381575 PIK3R4Q99570 1358 aa21.37■■□□□ 1.01
SHOX-202ENST00000381575 AMOTL2Q9Y2J4 779 aa21.36■■□□□ 1.01
SHOX-202ENST00000381575 METP08581 1390 aa21.33■■□□□ 1.01
SHOX-202ENST00000381575 SLC4A1APQ9BWU0 796 aaKnown RBP21.33■■□□□ 1
SHOX-202ENST00000381575 COL16A1Q07092 1604 aaPredicted RBP21.32■■□□□ 1
SHOX-202ENST00000381575 NCOA3Q9Y6Q9 1424 aa21.31■■□□□ 1
SHOX-202ENST00000381575 FOXD1Q16676 465 aa21.31■■□□□ 1
SHOX-202ENST00000381575 RGS17Q9UGC6 210 aaPredicted RBP21.31■■□□□ 1
SHOX-202ENST00000381575 ATF3P18847 181 aa21.29■■□□□ 1
SHOX-202ENST00000381575 C19orf44Q9H6X5 657 aa21.29■■□□□ 1
SHOX-202ENST00000381575 SETD1AO15047 1707 aaKnown RBP21.29■■□□□ 1
SHOX-202ENST00000381575 PPLO60437 1756 aa21.28■■□□□ 1
SHOX-202ENST00000381575 NALCNQ8IZF0 1738 aa21.27■■□□□ 1
SHOX-202ENST00000381575 CADPS2Q86UW7 1296 aa21.26■□□□□ 0.99
SHOX-202ENST00000381575 AHDC1Q5TGY3 1603 aaPredicted RBP21.24■□□□□ 0.99
SHOX-202ENST00000381575 JCADQ9P266 1359 aa21.24■□□□□ 0.99
SHOX-202ENST00000381575 BRINP3Q76B58 766 aa21.21■□□□□ 0.99
SHOX-202ENST00000381575 DCCP43146 1447 aa21.21■□□□□ 0.99
SHOX-202ENST00000381575 MST1RQ04912 1400 aa21.2■□□□□ 0.98
SHOX-202ENST00000381575 ADGRL3Q9HAR2 1447 aa21.2■□□□□ 0.98
SHOX-202ENST00000381575 POTEAQ6S8J7 498 aa21.2■□□□□ 0.98
SHOX-202ENST00000381575 ASXL1Q8IXJ9 1541 aa21.2■□□□□ 0.98
SHOX-202ENST00000381575 LRP6O75581 1613 aa21.19■□□□□ 0.98
SHOX-202ENST00000381575 SHPRHQ149N8 1683 aa21.19■□□□□ 0.98
SHOX-202ENST00000381575 VGFO15240 615 aaPredicted RBP21.18■□□□□ 0.98
SHOX-202ENST00000381575 NHSL1Q5SYE7 1610 aa21.17■□□□□ 0.98
SHOX-202ENST00000381575 IFT172Q9UG01 1749 aa21.16■□□□□ 0.98
SHOX-202ENST00000381575 ROBO2Q9HCK4 1378 aa21.16■□□□□ 0.98
SHOX-202ENST00000381575 CCDC144AA2RUR9 1427 aa21.16■□□□□ 0.98
SHOX-202ENST00000381575 RGL3Q3MIN7 710 aa21.15■□□□□ 0.98
SHOX-202ENST00000381575 DDX17Q92841 729 aaKnown RBP21.15■□□□□ 0.98
SHOX-202ENST00000381575 MPHOSPH9Q99550 1183 aa21.15■□□□□ 0.98
SHOX-202ENST00000381575 RPGRIP1LQ68CZ1 1315 aa21.15■□□□□ 0.98
SHOX-202ENST00000381575 PTCH1Q13635 1447 aa21.13■□□□□ 0.97
SHOX-202ENST00000381575 ADGRF5Q8IZF2 1346 aa21.12■□□□□ 0.97
SHOX-202ENST00000381575 SPATA31E1Q6ZUB1 1445 aa21.12■□□□□ 0.97
SHOX-202ENST00000381575 MEX3CQ5U5Q3 659 aaKnown RBP21.1■□□□□ 0.97
SHOX-202ENST00000381575 NUTM2BA6NNL0 878 aaPredicted RBP21.1■□□□□ 0.97
SHOX-202ENST00000381575 NUTM2EB1AL46 878 aaPredicted RBP21.1■□□□□ 0.97
SHOX-202ENST00000381575 NUTM2AQ8IVF1 878 aaPredicted RBP21.1■□□□□ 0.97
SHOX-202ENST00000381575 SPATA31A6Q5VVP1 1343 aa21.09■□□□□ 0.97
SHOX-202ENST00000381575 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
SHOX-202ENST00000381575 C1orf167Q5SNV9 1468 aa21.08■□□□□ 0.97
SHOX-202ENST00000381575 PRAG1Q86YV5 1406 aa21.06■□□□□ 0.96
SHOX-202ENST00000381575 STK26Q9P289 416 aa21.05■□□□□ 0.96
SHOX-202ENST00000381575 RAB3GAP2Q9H2M9 1393 aa21.04■□□□□ 0.96
SHOX-202ENST00000381575 ORAI2Q96SN7 254 aa21.04■□□□□ 0.96
SHOX-202ENST00000381575 ANKRD30BQ9BXX2 1392 aa21.02■□□□□ 0.96
SHOX-202ENST00000381575 TMEM132EQ6IEE7 984 aa21.02■□□□□ 0.96
SHOX-202ENST00000381575 PIK3C2GO75747 1445 aa21.02■□□□□ 0.95
SHOX-202ENST00000381575 KNDC1Q76NI1 1749 aa21.01■□□□□ 0.95
SHOX-202ENST00000381575 LAMC1P11047 1609 aa21.01■□□□□ 0.95
SHOX-202ENST00000381575 PNPLA6Q8IY17 1366 aa21.01■□□□□ 0.95
SHOX-202ENST00000381575 CDC42BPGQ6DT37 1551 aa21■□□□□ 0.95
SHOX-202ENST00000381575 WAPLQ7Z5K2 1190 aa20.99■□□□□ 0.95
SHOX-202ENST00000381575 LRRC59Q96AG4 307 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms