RNA–Protein interactions for RNA: ENST00000380578.1

TRAPPC2-202, Transcript of trafficking protein particle complex 2, humanhuman

TSL 5

Gene TRAPPC2, Length 3,108 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-202ENST00000380578 CHGAP10645 457 aaKnown RBP8.6□□□□□ -1.03
TRAPPC2-202ENST00000380578 CNTLNQ9NXG0 1405 aa8.6□□□□□ -1.03
TRAPPC2-202ENST00000380578 NOP58Q9Y2X3 529 aaKnown RBP8.6□□□□□ -1.03
TRAPPC2-202ENST00000380578 MROH2AA6NES4 1674 aa8.59□□□□□ -1.03
TRAPPC2-202ENST00000380578 PREX1Q8TCU6 1659 aa8.59□□□□□ -1.03
TRAPPC2-202ENST00000380578 ERVK-7P63135 1459 aa8.59□□□□□ -1.03
TRAPPC2-202ENST00000380578 UHRF1BP1Q6BDS2 1440 aa8.59□□□□□ -1.03
TRAPPC2-202ENST00000380578 ESF1Q9H501 851 aaKnown RBP8.58□□□□□ -1.04
TRAPPC2-202ENST00000380578 HNRNPUQ00839 825 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRAPPC2-202ENST00000380578 NBPF1Q3BBV0 1214 aa8.58□□□□□ -1.04
TRAPPC2-202ENST00000380578 PIK3C2BO00750 1634 aa8.58□□□□□ -1.04
TRAPPC2-202ENST00000380578 PRAG1Q86YV5 1406 aa8.57□□□□□ -1.04
TRAPPC2-202ENST00000380578 NUTM2DQ5VT03 806 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC2-202ENST00000380578 HSPA5P11021 654 aaKnown RBP8.56□□□□□ -1.04
TRAPPC2-202ENST00000380578 ADGRF5Q8IZF2 1346 aa8.56□□□□□ -1.04
TRAPPC2-202ENST00000380578 ADGRB3O60242 1522 aa8.56□□□□□ -1.04
TRAPPC2-202ENST00000380578 SPATA31D1Q6ZQQ2 1576 aa8.56□□□□□ -1.04
TRAPPC2-202ENST00000380578 SLC52A1Q9NWF4 448 aa8.56□□□□□ -1.04
TRAPPC2-202ENST00000380578 ZBED9Q6R2W3 1325 aa8.56□□□□□ -1.04
TRAPPC2-202ENST00000380578 KIF1BO60333 1816 aa8.56□□□□□ -1.04
TRAPPC2-202ENST00000380578 IRX6P78412 446 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC2-202ENST00000380578 SENP3Q9H4L4 574 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC2-202ENST00000380578 NEURL4Q96JN8 1562 aa8.54□□□□□ -1.04
TRAPPC2-202ENST00000380578 PAK3O75914 559 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC2-202ENST00000380578 ADRA2BP18089 450 aa8.54□□□□□ -1.04
TRAPPC2-202ENST00000380578 RNF123Q5XPI4 1314 aa8.54□□□□□ -1.04
TRAPPC2-202ENST00000380578 RALGAPBQ86X10 1494 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 TMEM131LA2VDJ0 1609 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 FER1L4A9Z1Z3 1794 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 C11orf95C9JLR9 678 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 WASHC2AQ641Q2 1341 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 TRPM1Q7Z4N2 1603 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 MYO5BQ9ULV0 1848 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 C3P01024 1663 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 MADDQ8WXG6 1647 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 SMG6Q86US8 1419 aaKnown RBP8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 TNRQ92752 1358 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 EIF4G2P78344 907 aaKnown RBP eCLIP8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 CFAP70Q5T0N1 1121 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 CARD11Q9BXL7 1154 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 IFT172Q9UG01 1749 aa8.53□□□□□ -1.04
TRAPPC2-202ENST00000380578 ROCK2O75116 1388 aaKnown RBP8.52□□□□□ -1.05
TRAPPC2-202ENST00000380578 NEXMIFQ5QGS0 1516 aa8.52□□□□□ -1.05
TRAPPC2-202ENST00000380578 A2ML1A8K2U0 1454 aa8.51□□□□□ -1.05
TRAPPC2-202ENST00000380578 ADAMTSL3P82987 1691 aa8.51□□□□□ -1.05
TRAPPC2-202ENST00000380578 RPGRIP1LQ68CZ1 1315 aa8.51□□□□□ -1.05
TRAPPC2-202ENST00000380578 IPO9Q96P70 1041 aaKnown RBP8.51□□□□□ -1.05
TRAPPC2-202ENST00000380578 ANO8Q9HCE9 1232 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC2-202ENST00000380578 STAG3Q9UJ98 1225 aa8.51□□□□□ -1.05
TRAPPC2-202ENST00000380578 PPLO60437 1756 aa8.51□□□□□ -1.05
TRAPPC2-202ENST00000380578 NRXN1Q9ULB1 1477 aa8.51□□□□□ -1.05
TRAPPC2-202ENST00000380578 RIMS1Q86UR5 1692 aaKnown RBP8.51□□□□□ -1.05
TRAPPC2-202ENST00000380578 MYOM2P54296 1465 aa8.51□□□□□ -1.05
TRAPPC2-202ENST00000380578 USP47Q96K76 1375 aa8.5□□□□□ -1.05
TRAPPC2-202ENST00000380578 B4GALNT3Q6L9W6 998 aa8.5□□□□□ -1.05
TRAPPC2-202ENST00000380578 STAC3Q96MF2 364 aa8.5□□□□□ -1.05
TRAPPC2-202ENST00000380578 GPRASP1Q5JY77 1395 aa8.5□□□□□ -1.05
TRAPPC2-202ENST00000380578 ST20-MTHFSA0A0A6YYL1 179 aa8.49□□□□□ -1.05
TRAPPC2-202ENST00000380578 TMEM132EQ6IEE7 984 aa8.49□□□□□ -1.05
TRAPPC2-202ENST00000380578 C14orf93Q9H972 538 aaKnown RBP8.49□□□□□ -1.05
TRAPPC2-202ENST00000380578 PIK3C2GO75747 1445 aa8.48□□□□□ -1.05
TRAPPC2-202ENST00000380578 VGFO15240 615 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC2-202ENST00000380578 CCDC7Q96M83 1385 aa8.48□□□□□ -1.05
TRAPPC2-202ENST00000380578 PRKRIP1Q9H875 184 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC2-202ENST00000380578 CCDC184Q52MB2 194 aa8.47□□□□□ -1.05
TRAPPC2-202ENST00000380578 RIMS2Q9UQ26 1411 aa8.47□□□□□ -1.05
TRAPPC2-202ENST00000380578 NBR1Q14596 966 aa8.47□□□□□ -1.05
TRAPPC2-202ENST00000380578 SALL2Q9Y467 1007 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC2-202ENST00000380578 ZFYVE9O95405 1425 aa8.47□□□□□ -1.05
TRAPPC2-202ENST00000380578 UBR1Q8IWV7 1749 aa8.46□□□□□ -1.05
TRAPPC2-202ENST00000380578 LTKP29376 864 aa8.46□□□□□ -1.05
TRAPPC2-202ENST00000380578 ANP32AP39687 249 aaKnown RBP8.46□□□□□ -1.05
TRAPPC2-202ENST00000380578 USP35Q9P2H5 1018 aa8.45□□□□□ -1.06
TRAPPC2-202ENST00000380578 NLRP1Q9C000 1473 aa8.45□□□□□ -1.06
TRAPPC2-202ENST00000380578 PTPRMP28827 1452 aa8.45□□□□□ -1.06
TRAPPC2-202ENST00000380578 KDM4FA0A1W2PPD8 638 aa8.45□□□□□ -1.06
TRAPPC2-202ENST00000380578 RTL5Q5HYW3 569 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC2-202ENST00000380578 TESK2Q96S53 571 aa8.45□□□□□ -1.06
TRAPPC2-202ENST00000380578 KIF7Q2M1P5 1343 aa8.45□□□□□ -1.06
TRAPPC2-202ENST00000380578 LAMC1P11047 1609 aa8.45□□□□□ -1.06
TRAPPC2-202ENST00000380578 TMEM2Q9UHN6 1383 aa8.45□□□□□ -1.06
TRAPPC2-202ENST00000380578 KIAA1210Q9ULL0 1709 aa8.45□□□□□ -1.06
TRAPPC2-202ENST00000380578 ADGRB1O14514 1584 aa8.45□□□□□ -1.06
TRAPPC2-202ENST00000380578 AMER1Q5JTC6 1135 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC2-202ENST00000380578 TRAK1Q9UPV9 953 aa8.44□□□□□ -1.06
TRAPPC2-202ENST00000380578 ZBTB47Q9UFB7 747 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC2-202ENST00000380578 ASXL1Q8IXJ9 1541 aa8.44□□□□□ -1.06
TRAPPC2-202ENST00000380578 MYO3AQ8NEV4 1616 aa8.44□□□□□ -1.06
TRAPPC2-202ENST00000380578 IQGAP1P46940 1657 aa8.44□□□□□ -1.06
TRAPPC2-202ENST00000380578 SCAF11Q99590 1463 aaKnown RBP8.43□□□□□ -1.06
TRAPPC2-202ENST00000380578 TXNDC2Q86VQ3 553 aa8.43□□□□□ -1.06
TRAPPC2-202ENST00000380578 ALKQ9UM73 1620 aa8.43□□□□□ -1.06
TRAPPC2-202ENST00000380578 STK26Q9P289 416 aa8.43□□□□□ -1.06
TRAPPC2-202ENST00000380578 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.42□□□□□ -1.06
TRAPPC2-202ENST00000380578 IL27Q8NEV9 243 aa8.42□□□□□ -1.06
TRAPPC2-202ENST00000380578 POLR3GLQ9BT43 218 aa8.42□□□□□ -1.06
TRAPPC2-202ENST00000380578 NUDCQ9Y266 331 aa8.42□□□□□ -1.06
TRAPPC2-202ENST00000380578 KDM5AP29375 1690 aaKnown RBP8.42□□□□□ -1.06
TRAPPC2-202ENST00000380578 SETBP1Q9Y6X0 1596 aa8.42□□□□□ -1.06
TRAPPC2-202ENST00000380578 DISP3Q9P2K9 1392 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms