RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 GCC2Q8IWJ2 1684 aa35.62■■■■□ 3.29
U2AF1-202ENST00000380276 CHGAP10645 457 aaKnown RBP35.61■■■■□ 3.29
U2AF1-202ENST00000380276 MYO5BQ9ULV0 1848 aa35.6■■■■□ 3.29
U2AF1-202ENST00000380276 FAM135BQ49AJ0 1406 aa35.58■■■■□ 3.29
U2AF1-202ENST00000380276 NKTRP30414 1462 aaKnown RBP35.57■■■■□ 3.28
U2AF1-202ENST00000380276 RIMS2Q9UQ26 1411 aa35.57■■■■□ 3.28
U2AF1-202ENST00000380276 NWD1Q149M9 1564 aa35.56■■■■□ 3.28
U2AF1-202ENST00000380276 UNC13BO14795 1591 aa35.55■■■■□ 3.28
U2AF1-202ENST00000380276 HDGFP51858 240 aaKnown RBP35.55■■■■□ 3.28
U2AF1-202ENST00000380276 ROBO1Q9Y6N7 1651 aa35.55■■■■□ 3.28
U2AF1-202ENST00000380276 MSH6P52701 1360 aa35.53■■■■□ 3.28
U2AF1-202ENST00000380276 ZFYVE9O95405 1425 aa35.53■■■■□ 3.28
U2AF1-202ENST00000380276 PLEKHG1Q9ULL1 1385 aa35.52■■■■□ 3.28
U2AF1-202ENST00000380276 TMEM131LA2VDJ0 1609 aa35.52■■■■□ 3.28
U2AF1-202ENST00000380276 ITGAEP38570 1179 aa35.51■■■■□ 3.28
U2AF1-202ENST00000380276 E9PCH4 1651 aa35.47■■■■□ 3.27
U2AF1-202ENST00000380276 NUTM2DQ5VT03 806 aaPredicted RBP35.47■■■■□ 3.27
U2AF1-202ENST00000380276 ROCK1Q13464 1354 aa35.44■■■■□ 3.26
U2AF1-202ENST00000380276 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.44■■■■□ 3.26
U2AF1-202ENST00000380276 CHD2O14647 1828 aaKnown RBP35.43■■■■□ 3.26
U2AF1-202ENST00000380276 C14orf37Q86TY3 774 aa35.42■■■■□ 3.26
U2AF1-202ENST00000380276 RGS17Q9UGC6 210 aaPredicted RBP35.42■■■■□ 3.26
U2AF1-202ENST00000380276 IQGAP3Q86VI3 1631 aa35.42■■■■□ 3.26
U2AF1-202ENST00000380276 PPARGC1BQ86YN6 1023 aaKnown RBP35.4■■■■□ 3.26
U2AF1-202ENST00000380276 NUP155O75694 1391 aa35.39■■■■□ 3.26
U2AF1-202ENST00000380276 SLAIN2Q9P270 581 aa35.39■■■■□ 3.26
U2AF1-202ENST00000380276 TBX22Q9Y458 520 aa35.38■■■■□ 3.25
U2AF1-202ENST00000380276 PHLPP1O60346 1717 aa35.37■■■■□ 3.25
U2AF1-202ENST00000380276 DIP2AQ14689 1571 aa35.31■■■■□ 3.24
U2AF1-202ENST00000380276 ADAMTS13Q76LX8 1427 aa35.31■■■■□ 3.24
U2AF1-202ENST00000380276 POTEAQ6S8J7 498 aa35.26■■■■□ 3.24
U2AF1-202ENST00000380276 JCADQ9P266 1359 aa35.25■■■■□ 3.23
U2AF1-202ENST00000380276 TRPM2O94759 1503 aa35.25■■■■□ 3.23
U2AF1-202ENST00000380276 NCOA3Q9Y6Q9 1424 aa35.24■■■■□ 3.23
U2AF1-202ENST00000380276 ATF3P18847 181 aa35.23■■■■□ 3.23
U2AF1-202ENST00000380276 PIK3R4Q99570 1358 aa35.23■■■■□ 3.23
U2AF1-202ENST00000380276 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.21■■■■□ 3.23
U2AF1-202ENST00000380276 ZNF326Q5BKZ1 582 aaKnown RBP35.21■■■■□ 3.23
U2AF1-202ENST00000380276 CADPS2Q86UW7 1296 aa35.21■■■■□ 3.23
U2AF1-202ENST00000380276 AMOTL2Q9Y2J4 779 aa35.2■■■■□ 3.23
U2AF1-202ENST00000380276 SPHKAPQ2M3C7 1700 aa35.2■■■■□ 3.23
U2AF1-202ENST00000380276 C19orf44Q9H6X5 657 aa35.19■■■■□ 3.22
U2AF1-202ENST00000380276 COL16A1Q07092 1604 aaPredicted RBP35.18■■■■□ 3.22
U2AF1-202ENST00000380276 PTPRUQ92729 1446 aa35.15■■■■□ 3.22
U2AF1-202ENST00000380276 MEX3CQ5U5Q3 659 aaKnown RBP35.13■■■■□ 3.21
U2AF1-202ENST00000380276 NRXN3Q9Y4C0 1643 aa35.08■■■■□ 3.21
U2AF1-202ENST00000380276 AHDC1Q5TGY3 1603 aaPredicted RBP35.07■■■■□ 3.21
U2AF1-202ENST00000380276 SETBP1Q9Y6X0 1596 aa35.06■■■■□ 3.2
U2AF1-202ENST00000380276 SPATA31A6Q5VVP1 1343 aa35.06■■■■□ 3.2
U2AF1-202ENST00000380276 LRP6O75581 1613 aa35.04■■■■□ 3.2
U2AF1-202ENST00000380276 SETD1AO15047 1707 aaKnown RBP35.03■■■■□ 3.2
U2AF1-202ENST00000380276 XRN1Q8IZH2 1706 aaKnown RBP35.03■■■■□ 3.2
U2AF1-202ENST00000380276 CLTCL1P53675 1640 aa35.03■■■■□ 3.2
U2AF1-202ENST00000380276 BRINP3Q76B58 766 aa35.02■■■■□ 3.2
U2AF1-202ENST00000380276 SHPRHQ149N8 1683 aa35■■■■□ 3.19
U2AF1-202ENST00000380276 METP08581 1390 aa35■■■■□ 3.19
U2AF1-202ENST00000380276 DCCP43146 1447 aa34.99■■■■□ 3.19
U2AF1-202ENST00000380276 NUTM2BA6NNL0 878 aaPredicted RBP34.97■■■■□ 3.19
U2AF1-202ENST00000380276 NUTM2EB1AL46 878 aaPredicted RBP34.97■■■■□ 3.19
U2AF1-202ENST00000380276 NUTM2AQ8IVF1 878 aaPredicted RBP34.97■■■■□ 3.19
U2AF1-202ENST00000380276 NEXMIFQ5QGS0 1516 aa34.96■■■■□ 3.19
U2AF1-202ENST00000380276 TRIM52Q96A61 297 aa34.96■■■■□ 3.19
U2AF1-202ENST00000380276 KIF1BO60333 1816 aa34.95■■■■□ 3.19
U2AF1-202ENST00000380276 RRBP1Q9P2E9 1410 aaKnown RBP34.95■■■■□ 3.19
U2AF1-202ENST00000380276 ASXL1Q8IXJ9 1541 aa34.95■■■■□ 3.19
U2AF1-202ENST00000380276 NAIPQ13075 1403 aa34.93■■■■□ 3.18
U2AF1-202ENST00000380276 ZNF772Q68DY9 489 aaPredicted RBP34.93■■■■□ 3.18
U2AF1-202ENST00000380276 MST1RQ04912 1400 aa34.92■■■■□ 3.18
U2AF1-202ENST00000380276 ADGRL3Q9HAR2 1447 aa34.88■■■■□ 3.17
U2AF1-202ENST00000380276 NALCNQ8IZF0 1738 aa34.86■■■■□ 3.17
U2AF1-202ENST00000380276 NHSL1Q5SYE7 1610 aa34.84■■■■□ 3.17
U2AF1-202ENST00000380276 DDX17Q92841 729 aaKnown RBP34.83■■■■□ 3.17
U2AF1-202ENST00000380276 SETD5Q9C0A6 1442 aa34.81■■■■□ 3.16
U2AF1-202ENST00000380276 VGFO15240 615 aaPredicted RBP34.8■■■■□ 3.16
U2AF1-202ENST00000380276 LRRC59Q96AG4 307 aaKnown RBP34.8■■■■□ 3.16
U2AF1-202ENST00000380276 SLC4A1APQ9BWU0 796 aaKnown RBP34.8■■■■□ 3.16
U2AF1-202ENST00000380276 RXRBP28702 533 aa34.78■■■■□ 3.16
U2AF1-202ENST00000380276 HFM1A2PYH4 1435 aa34.76■■■■□ 3.16
U2AF1-202ENST00000380276 AFF2P51816 1311 aa34.76■■■■□ 3.15
U2AF1-202ENST00000380276 PTCH1Q13635 1447 aa34.72■■■■□ 3.15
U2AF1-202ENST00000380276 C8orf37Q96NL8 207 aa34.72■■■■□ 3.15
U2AF1-202ENST00000380276 C1orf167Q5SNV9 1468 aa34.71■■■■□ 3.15
U2AF1-202ENST00000380276 PNPLA6Q8IY17 1366 aa34.71■■■■□ 3.15
U2AF1-202ENST00000380276 ROBO2Q9HCK4 1378 aa34.71■■■■□ 3.15
U2AF1-202ENST00000380276 RPGRIP1LQ68CZ1 1315 aa34.7■■■■□ 3.15
U2AF1-202ENST00000380276 PPLO60437 1756 aa34.67■■■■□ 3.14
U2AF1-202ENST00000380276 FOXD1Q16676 465 aa34.66■■■■□ 3.14
U2AF1-202ENST00000380276 UPF1Q92900 1129 aaKnown RBP eCLIP34.66■■■■□ 3.14
U2AF1-202ENST00000380276 ORAI2Q96SN7 254 aa34.65■■■■□ 3.14
U2AF1-202ENST00000380276 ADAMTS2O95450 1211 aa34.63■■■■□ 3.13
U2AF1-202ENST00000380276 CDK12Q9NYV4 1490 aaPredicted RBP34.59■■■■□ 3.13
U2AF1-202ENST00000380276 QTRT2Q9H974 415 aaKnown RBP34.59■■■■□ 3.13
U2AF1-202ENST00000380276 NGLY1Q96IV0 654 aa34.58■■■■□ 3.13
U2AF1-202ENST00000380276 RGL3Q3MIN7 710 aa34.57■■■■□ 3.12
U2AF1-202ENST00000380276 CCDC144AA2RUR9 1427 aa34.56■■■■□ 3.12
U2AF1-202ENST00000380276 PRAG1Q86YV5 1406 aa34.55■■■■□ 3.12
U2AF1-202ENST00000380276 RBM6P78332 1123 aaKnown RBP34.54■■■■□ 3.12
U2AF1-202ENST00000380276 LAMC1P11047 1609 aa34.54■■■■□ 3.12
U2AF1-202ENST00000380276 SOS2Q07890 1332 aaPredicted RBP34.54■■■■□ 3.12
U2AF1-202ENST00000380276 STK26Q9P289 416 aa34.53■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms