RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 CAGE1Q8TC20 777 aa19.43■□□□□ 0.7
KCNC1-202ENST00000379472 SAFBQ15424 915 aaKnown RBP eCLIP19.42■□□□□ 0.7
KCNC1-202ENST00000379472 SPDYE4A6NLX3 237 aa19.42■□□□□ 0.7
KCNC1-202ENST00000379472 SEPT7Q16181 437 aaKnown RBP19.41■□□□□ 0.7
KCNC1-202ENST00000379472 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
KCNC1-202ENST00000379472 NEBLO76041 1014 aa19.41■□□□□ 0.7
KCNC1-202ENST00000379472 RCAN3Q9UKA8 241 aa19.41■□□□□ 0.7
KCNC1-202ENST00000379472 BICD2Q8TD16 824 aa19.41■□□□□ 0.7
KCNC1-202ENST00000379472 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
KCNC1-202ENST00000379472 BRMS1Q9HCU9 246 aa19.4■□□□□ 0.7
KCNC1-202ENST00000379472 ROCK2O75116 1388 aaKnown RBP19.4■□□□□ 0.7
KCNC1-202ENST00000379472 WASHC2AQ641Q2 1341 aa19.39■□□□□ 0.7
KCNC1-202ENST00000379472 RUFY2Q8WXA3 655 aa19.39■□□□□ 0.69
KCNC1-202ENST00000379472 TTLL5Q6EMB2 1281 aa19.39■□□□□ 0.69
KCNC1-202ENST00000379472 ACBD3Q9H3P7 528 aa19.39■□□□□ 0.69
KCNC1-202ENST00000379472 NECTIN2Q92692 538 aa19.38■□□□□ 0.69
KCNC1-202ENST00000379472 BCL11BQ9C0K0 894 aaPredicted RBP19.38■□□□□ 0.69
KCNC1-202ENST00000379472 IFIT2P09913 472 aaKnown RBP19.38■□□□□ 0.69
KCNC1-202ENST00000379472 NOM1Q5C9Z4 860 aaKnown RBP19.37■□□□□ 0.69
KCNC1-202ENST00000379472 KDM4AO75164 1064 aa19.37■□□□□ 0.69
KCNC1-202ENST00000379472 ANKRD45Q5TZF3 282 aa19.37■□□□□ 0.69
KCNC1-202ENST00000379472 ANKRD18AQ8IVF6 992 aa19.37■□□□□ 0.69
KCNC1-202ENST00000379472 EIF3AQ14152 1382 aaKnown RBP19.36■□□□□ 0.69
KCNC1-202ENST00000379472 PLIN1O60240 522 aa19.36■□□□□ 0.69
KCNC1-202ENST00000379472 ZKSCAN1P17029 563 aaPredicted RBP19.36■□□□□ 0.69
KCNC1-202ENST00000379472 CDK5RAP3Q96JB5 506 aa19.35■□□□□ 0.69
KCNC1-202ENST00000379472 H0YHG0 523 aa19.35■□□□□ 0.69
KCNC1-202ENST00000379472 FOXD1Q16676 465 aa19.35■□□□□ 0.69
KCNC1-202ENST00000379472 DDX49Q9Y6V7 483 aaKnown RBP19.35■□□□□ 0.69
KCNC1-202ENST00000379472 HSP90AA2PQ14568 343 aaPredicted RBP19.35■□□□□ 0.69
KCNC1-202ENST00000379472 PDILTQ8N807 584 aa19.35■□□□□ 0.69
KCNC1-202ENST00000379472 TMEM87AQ8NBN3 555 aa19.34■□□□□ 0.69
KCNC1-202ENST00000379472 DDX11L8A8MPP1 907 aa19.34■□□□□ 0.69
KCNC1-202ENST00000379472 ATP2B2Q01814 1243 aa19.34■□□□□ 0.69
KCNC1-202ENST00000379472 HSP90AB4PQ58FF6 505 aa19.34■□□□□ 0.69
KCNC1-202ENST00000379472 PDCL3Q9H2J4 239 aa19.34■□□□□ 0.69
KCNC1-202ENST00000379472 HSP90B2PQ58FF3 399 aa19.34■□□□□ 0.69
KCNC1-202ENST00000379472 ELL2O00472 640 aaPredicted RBP19.33■□□□□ 0.69
KCNC1-202ENST00000379472 SASS6Q6UVJ0 657 aa19.32■□□□□ 0.68
KCNC1-202ENST00000379472 KRT18P05783 430 aaKnown RBP19.32■□□□□ 0.68
KCNC1-202ENST00000379472 XBP1P17861 261 aa19.32■□□□□ 0.68
KCNC1-202ENST00000379472 ENOX2Q16206 610 aaKnown RBP19.32■□□□□ 0.68
KCNC1-202ENST00000379472 HMGN5P82970 282 aaKnown RBP19.32■□□□□ 0.68
KCNC1-202ENST00000379472 PSME1Q06323 249 aa19.32■□□□□ 0.68
KCNC1-202ENST00000379472 MPHOSPH10O00566 681 aaKnown RBP19.31■□□□□ 0.68
KCNC1-202ENST00000379472 OLFM4Q6UX06 510 aa19.31■□□□□ 0.68
KCNC1-202ENST00000379472 DDX58O95786 925 aaKnown RBP19.31■□□□□ 0.68
KCNC1-202ENST00000379472 MATR3P43243 847 aaKnown RBP eCLIP19.31■□□□□ 0.68
KCNC1-202ENST00000379472 MNS1Q8NEH6 495 aa19.31■□□□□ 0.68
KCNC1-202ENST00000379472 CENPJQ9HC77 1338 aaPredicted RBP19.3■□□□□ 0.68
KCNC1-202ENST00000379472 RNF20Q5VTR2 975 aa19.3■□□□□ 0.68
KCNC1-202ENST00000379472 RALYLQ86SE5 291 aaKnown RBP19.3■□□□□ 0.68
KCNC1-202ENST00000379472 G3BP1Q13283 466 aaKnown RBP eCLIP19.29■□□□□ 0.68
KCNC1-202ENST00000379472 WASHC4Q2M389 1173 aa19.29■□□□□ 0.68
KCNC1-202ENST00000379472 ARGLU1Q9NWB6 273 aaPredicted RBP19.27■□□□□ 0.68
KCNC1-202ENST00000379472 FAM177BA6PVY3 158 aa19.27■□□□□ 0.68
KCNC1-202ENST00000379472 NEUROD6Q96NK8 337 aa19.27■□□□□ 0.67
KCNC1-202ENST00000379472 COG3Q96JB2 828 aa19.26■□□□□ 0.67
KCNC1-202ENST00000379472 EZRP15311 586 aaKnown RBP19.26■□□□□ 0.67
KCNC1-202ENST00000379472 PAXIP1Q6ZW49 1069 aaPredicted RBP19.26■□□□□ 0.67
KCNC1-202ENST00000379472 MAGEC2Q9UBF1 373 aaPredicted RBP19.26■□□□□ 0.67
KCNC1-202ENST00000379472 ERLIN2O94905 339 aa19.26■□□□□ 0.67
KCNC1-202ENST00000379472 WASHC2CQ9Y4E1 1318 aa19.25■□□□□ 0.67
KCNC1-202ENST00000379472 VPS37CA5D8V6 355 aaPredicted RBP19.25■□□□□ 0.67
KCNC1-202ENST00000379472 DHX37Q8IY37 1157 aaKnown RBP19.25■□□□□ 0.67
KCNC1-202ENST00000379472 CHMP5Q9NZZ3 219 aa19.25■□□□□ 0.67
KCNC1-202ENST00000379472 DESP17661 470 aa19.25■□□□□ 0.67
KCNC1-202ENST00000379472 SEPT11Q9NVA2 429 aaKnown RBP19.24■□□□□ 0.67
KCNC1-202ENST00000379472 RRP7AQ9Y3A4 280 aaKnown RBP19.24■□□□□ 0.67
KCNC1-202ENST00000379472 RBM5P52756 815 aaKnown RBP eCLIP19.24■□□□□ 0.67
KCNC1-202ENST00000379472 MYCNP04198 464 aaPredicted RBP19.23■□□□□ 0.67
KCNC1-202ENST00000379472 CHMP4BP1P59074 171 aa19.23■□□□□ 0.67
KCNC1-202ENST00000379472 ZHX3Q9H4I2 956 aa19.23■□□□□ 0.67
KCNC1-202ENST00000379472 TRIM21P19474 475 aaKnown RBP19.23■□□□□ 0.67
KCNC1-202ENST00000379472 IFT57Q9NWB7 429 aa19.23■□□□□ 0.67
KCNC1-202ENST00000379472 TSPYL1Q9H0U9 437 aa19.22■□□□□ 0.67
KCNC1-202ENST00000379472 PKD2Q13563 968 aa19.22■□□□□ 0.67
KCNC1-202ENST00000379472 CCDC73Q6ZRK6 1079 aa19.22■□□□□ 0.67
KCNC1-202ENST00000379472 BRPF1P55201 1214 aaPredicted RBP19.22■□□□□ 0.67
KCNC1-202ENST00000379472 SLC3A2P08195 630 aaKnown RBP19.22■□□□□ 0.67
KCNC1-202ENST00000379472 GBP2P32456 591 aaPredicted RBP19.22■□□□□ 0.67
KCNC1-202ENST00000379472 HSP90AB3PQ58FF7 597 aa19.22■□□□□ 0.67
KCNC1-202ENST00000379472 KIF3BO15066 747 aa19.21■□□□□ 0.67
KCNC1-202ENST00000379472 CGNL1Q0VF96 1302 aa19.21■□□□□ 0.67
KCNC1-202ENST00000379472 ATF3P18847 181 aa19.2■□□□□ 0.66
KCNC1-202ENST00000379472 RIC3Q7Z5B4 369 aa19.2■□□□□ 0.66
KCNC1-202ENST00000379472 GRIPAP1Q4V328 841 aa19.2■□□□□ 0.66
KCNC1-202ENST00000379472 RALBP1Q15311 655 aa19.19■□□□□ 0.66
KCNC1-202ENST00000379472 ERCC4Q92889 916 aaPredicted RBP19.19■□□□□ 0.66
KCNC1-202ENST00000379472 SKOR2Q2VWA4 1001 aaPredicted RBP19.19■□□□□ 0.66
KCNC1-202ENST00000379472 TXLNAP40222 546 aa19.19■□□□□ 0.66
KCNC1-202ENST00000379472 SMC3Q9UQE7 1217 aa19.19■□□□□ 0.66
KCNC1-202ENST00000379472 AIMP1Q12904 312 aaKnown RBP19.19■□□□□ 0.66
KCNC1-202ENST00000379472 SART3Q15020 963 aaKnown RBP19.18■□□□□ 0.66
KCNC1-202ENST00000379472 PLCD3Q8N3E9 789 aa19.18■□□□□ 0.66
KCNC1-202ENST00000379472 NAT10Q9H0A0 1025 aaKnown RBP19.18■□□□□ 0.66
KCNC1-202ENST00000379472 TRAK1Q9UPV9 953 aa19.18■□□□□ 0.66
KCNC1-202ENST00000379472 BCL2L13Q9BXK5 485 aa19.17■□□□□ 0.66
KCNC1-202ENST00000379472 ATP2B1P20020 1258 aa19.17■□□□□ 0.66
KCNC1-202ENST00000379472 TAX1BP1Q86VP1 789 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms