RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 ARHGAP23Q9P227 1491 aa35.32■■■■□ 3.25
TM6SF1-204ENST00000379390 ZFYVE9O95405 1425 aa35.32■■■■□ 3.24
TM6SF1-204ENST00000379390 POLR1AO95602 1720 aaPredicted RBP35.3■■■■□ 3.24
TM6SF1-204ENST00000379390 HSPA2P54652 639 aa35.29■■■■□ 3.24
TM6SF1-204ENST00000379390 NUTM2DQ5VT03 806 aaPredicted RBP35.29■■■■□ 3.24
TM6SF1-204ENST00000379390 DCAF11Q8TEB1 546 aa35.28■■■■□ 3.24
TM6SF1-204ENST00000379390 AEBP2Q6ZN18 517 aaPredicted RBP35.28■■■■□ 3.24
TM6SF1-204ENST00000379390 RPGRIP1LQ68CZ1 1315 aa35.26■■■■□ 3.23
TM6SF1-204ENST00000379390 KDM2AQ9Y2K7 1162 aa35.25■■■■□ 3.23
TM6SF1-204ENST00000379390 MYOM2P54296 1465 aa35.23■■■■□ 3.23
TM6SF1-204ENST00000379390 SCAF11Q99590 1463 aaKnown RBP35.22■■■■□ 3.23
TM6SF1-204ENST00000379390 LTKP29376 864 aa35.21■■■■□ 3.23
TM6SF1-204ENST00000379390 PPP1R15AO75807 674 aaPredicted RBP35.19■■■■□ 3.22
TM6SF1-204ENST00000379390 TXNDC2Q86VQ3 553 aa35.19■■■■□ 3.22
TM6SF1-204ENST00000379390 SENP3Q9H4L4 574 aaPredicted RBP35.19■■■■□ 3.22
TM6SF1-204ENST00000379390 TIMELESSQ9UNS1 1208 aa35.18■■■■□ 3.22
TM6SF1-204ENST00000379390 EID1Q9Y6B2 187 aa35.18■■■■□ 3.22
TM6SF1-204ENST00000379390 ADGRF5Q8IZF2 1346 aa35.18■■■■□ 3.22
TM6SF1-204ENST00000379390 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.17■■■■□ 3.22
TM6SF1-204ENST00000379390 STRCQ7RTU9 1775 aa35.17■■■■□ 3.22
TM6SF1-204ENST00000379390 IQGAP1P46940 1657 aa35.17■■■■□ 3.22
TM6SF1-204ENST00000379390 VGFO15240 615 aaPredicted RBP35.15■■■■□ 3.22
TM6SF1-204ENST00000379390 HDGFP51858 240 aaKnown RBP35.15■■■■□ 3.22
TM6SF1-204ENST00000379390 ANKLE2Q86XL3 938 aa35.14■■■■□ 3.22
TM6SF1-204ENST00000379390 NRXN1Q9ULB1 1477 aa35.14■■■■□ 3.22
TM6SF1-204ENST00000379390 NRXN3Q9Y4C0 1643 aa35.13■■■■□ 3.21
TM6SF1-204ENST00000379390 NCKAP5LQ9HCH0 1330 aa35.12■■■■□ 3.21
TM6SF1-204ENST00000379390 PRAG1Q86YV5 1406 aa35.11■■■■□ 3.21
TM6SF1-204ENST00000379390 PIK3C2GO75747 1445 aa35.1■■■■□ 3.21
TM6SF1-204ENST00000379390 PLEKHG1Q9ULL1 1385 aa35.08■■■■□ 3.21
TM6SF1-204ENST00000379390 STAC3Q96MF2 364 aa35.08■■■■□ 3.21
TM6SF1-204ENST00000379390 SETBP1Q9Y6X0 1596 aa35.08■■■■□ 3.21
TM6SF1-204ENST00000379390 TRPM1Q7Z4N2 1603 aa35.05■■■■□ 3.2
TM6SF1-204ENST00000379390 SETD1AO15047 1707 aaKnown RBP35.05■■■■□ 3.2
TM6SF1-204ENST00000379390 MED14O60244 1454 aa35.04■■■■□ 3.2
TM6SF1-204ENST00000379390 LAMC1P11047 1609 aa35.04■■■■□ 3.2
TM6SF1-204ENST00000379390 NPHP4O75161 1426 aaPredicted RBP35.04■■■■□ 3.2
TM6SF1-204ENST00000379390 NBPF8Q3BBV2 869 aa35.03■■■■□ 3.2
TM6SF1-204ENST00000379390 BCANQ96GW7 911 aa35.03■■■■□ 3.2
TM6SF1-204ENST00000379390 KIAA1210Q9ULL0 1709 aa35.02■■■■□ 3.2
TM6SF1-204ENST00000379390 ALKQ9UM73 1620 aa35.02■■■■□ 3.2
TM6SF1-204ENST00000379390 ADAMTS13Q76LX8 1427 aa34.98■■■■□ 3.19
TM6SF1-204ENST00000379390 ZEB1P37275 1124 aaPredicted RBP34.96■■■■□ 3.19
TM6SF1-204ENST00000379390 CFAP70Q5T0N1 1121 aa34.95■■■■□ 3.19
TM6SF1-204ENST00000379390 SLC26A8Q96RN1 970 aa34.95■■■■□ 3.19
TM6SF1-204ENST00000379390 DIP2AQ14689 1571 aa34.95■■■■□ 3.19
TM6SF1-204ENST00000379390 ASXL1Q8IXJ9 1541 aa34.92■■■■□ 3.18
TM6SF1-204ENST00000379390 RALGAPBQ86X10 1494 aa34.92■■■■□ 3.18
TM6SF1-204ENST00000379390 C14orf93Q9H972 538 aaKnown RBP34.91■■■■□ 3.18
TM6SF1-204ENST00000379390 ADGRB1O14514 1584 aa34.87■■■■□ 3.17
TM6SF1-204ENST00000379390 NBPF1Q3BBV0 1214 aa34.87■■■■□ 3.17
TM6SF1-204ENST00000379390 METP08581 1390 aa34.86■■■■□ 3.17
TM6SF1-204ENST00000379390 ROCK2O75116 1388 aaKnown RBP34.85■■■■□ 3.17
TM6SF1-204ENST00000379390 TMEM132EQ6IEE7 984 aa34.84■■■■□ 3.17
TM6SF1-204ENST00000379390 CHD2O14647 1828 aaKnown RBP34.83■■■■□ 3.17
TM6SF1-204ENST00000379390 TBX22Q9Y458 520 aa34.83■■■■□ 3.17
TM6SF1-204ENST00000379390 GPRASP1Q5JY77 1395 aa34.76■■■■□ 3.16
TM6SF1-204ENST00000379390 DMRT2Q9Y5R5 561 aa34.76■■■■□ 3.15
TM6SF1-204ENST00000379390 PTPRUQ92729 1446 aa34.76■■■■□ 3.15
TM6SF1-204ENST00000379390 XRN1Q8IZH2 1706 aaKnown RBP34.76■■■■□ 3.15
TM6SF1-204ENST00000379390 STRCP1A6NGW2 1772 aa34.75■■■■□ 3.15
TM6SF1-204ENST00000379390 KNDC1Q76NI1 1749 aa34.75■■■■□ 3.15
TM6SF1-204ENST00000379390 YTHDC2Q9H6S0 1430 aaKnown RBP34.74■■■■□ 3.15
TM6SF1-204ENST00000379390 CARD11Q9BXL7 1154 aa34.73■■■■□ 3.15
TM6SF1-204ENST00000379390 ARHGEF28Q8N1W1 1705 aaKnown RBP34.73■■■■□ 3.15
TM6SF1-204ENST00000379390 STK26Q9P289 416 aa34.72■■■■□ 3.15
TM6SF1-204ENST00000379390 PIK3R4Q99570 1358 aa34.72■■■■□ 3.15
TM6SF1-204ENST00000379390 NWD1Q149M9 1564 aa34.71■■■■□ 3.15
TM6SF1-204ENST00000379390 LRPPRCP42704 1394 aaKnown RBP34.69■■■■□ 3.14
TM6SF1-204ENST00000379390 CPS1P31327 1500 aa34.66■■■■□ 3.14
TM6SF1-204ENST00000379390 TRAK1Q9UPV9 953 aa34.66■■■■□ 3.14
TM6SF1-204ENST00000379390 AMOTL2Q9Y2J4 779 aa34.66■■■■□ 3.14
TM6SF1-204ENST00000379390 ZNF335Q9H4Z2 1342 aaPredicted RBP34.62■■■■□ 3.13
TM6SF1-204ENST00000379390 TECPR2O15040 1411 aa34.62■■■■□ 3.13
TM6SF1-204ENST00000379390 KCNA6P17658 529 aa34.62■■■■□ 3.13
TM6SF1-204ENST00000379390 ABCC11Q96J66 1382 aa34.62■■■■□ 3.13
TM6SF1-204ENST00000379390 DLC1Q96QB1 1528 aa34.61■■■■□ 3.13
TM6SF1-204ENST00000379390 USP47Q96K76 1375 aa34.6■■■■□ 3.13
TM6SF1-204ENST00000379390 ROBO2Q9HCK4 1378 aa34.58■■■■□ 3.13
TM6SF1-204ENST00000379390 PTCH1Q13635 1447 aa34.57■■■■□ 3.13
TM6SF1-204ENST00000379390 QRICH2Q9H0J4 1663 aa34.57■■■■□ 3.13
TM6SF1-204ENST00000379390 NKTRP30414 1462 aaKnown RBP34.57■■■■□ 3.12
TM6SF1-204ENST00000379390 EIF3AQ14152 1382 aaKnown RBP34.54■■■■□ 3.12
TM6SF1-204ENST00000379390 PLEKHH1Q9ULM0 1364 aa34.52■■■■□ 3.12
TM6SF1-204ENST00000379390 PRAM1Q96QH2 718 aa34.52■■■■□ 3.12
TM6SF1-204ENST00000379390 FAM135BQ49AJ0 1406 aa34.51■■■■□ 3.12
TM6SF1-204ENST00000379390 WAPLQ7Z5K2 1190 aa34.51■■■■□ 3.11
TM6SF1-204ENST00000379390 XIRP1Q702N8 1843 aaKnown RBP34.51■■■■□ 3.11
TM6SF1-204ENST00000379390 SAFB2Q14151 953 aaKnown RBP eCLIP34.5■■■■□ 3.11
TM6SF1-204ENST00000379390 EIF4G2P78344 907 aaKnown RBP eCLIP34.49■■■■□ 3.11
TM6SF1-204ENST00000379390 NALCNQ8IZF0 1738 aa34.48■■■■□ 3.11
TM6SF1-204ENST00000379390 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.48■■■■□ 3.11
TM6SF1-204ENST00000379390 RBM33Q96EV2 1170 aaKnown RBP34.48■■■■□ 3.11
TM6SF1-204ENST00000379390 POGKQ9P215 609 aa34.48■■■■□ 3.11
TM6SF1-204ENST00000379390 HSPA5P11021 654 aaKnown RBP34.47■■■■□ 3.11
TM6SF1-204ENST00000379390 CENPJQ9HC77 1338 aaPredicted RBP34.47■■■■□ 3.11
TM6SF1-204ENST00000379390 LTBP4Q8N2S1 1624 aa34.46■■■■□ 3.11
TM6SF1-204ENST00000379390 ST20-MTHFSA0A0A6YYL1 179 aa34.46■■■■□ 3.11
TM6SF1-204ENST00000379390 PROSER2Q86WR7 435 aaPredicted RBP34.44■■■■□ 3.1
TM6SF1-204ENST00000379390 HIRIP3Q9BW71 556 aaPredicted RBP34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms