RNA–Protein interactions for RNA: ENST00000378800.3

CCL19-202, Transcript of C-C motif chemokine ligand 19, humanhuman

TSL 2 BASIC

Gene CCL19, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-202ENST00000378800 RAB3GAP2Q9H2M9 1393 aa19.73■□□□□ 0.75
CCL19-202ENST00000378800 PPP1R15AO75807 674 aaPredicted RBP19.73■□□□□ 0.75
CCL19-202ENST00000378800 KDM5AP29375 1690 aaKnown RBP19.72■□□□□ 0.75
CCL19-202ENST00000378800 IQGAP1P46940 1657 aa19.71■□□□□ 0.75
CCL19-202ENST00000378800 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
CCL19-202ENST00000378800 PLEKHG1Q9ULL1 1385 aa19.7■□□□□ 0.74
CCL19-202ENST00000378800 ACIN1Q9UKV3 1341 aaKnown RBP19.69■□□□□ 0.74
CCL19-202ENST00000378800 UBAP1LF5GYI3 381 aa19.67■□□□□ 0.74
CCL19-202ENST00000378800 KCNA6P17658 529 aa19.67■□□□□ 0.74
CCL19-202ENST00000378800 TBX22Q9Y458 520 aa19.67■□□□□ 0.74
CCL19-202ENST00000378800 TRPM2O94759 1503 aa19.66■□□□□ 0.74
CCL19-202ENST00000378800 HRCP23327 699 aa19.66■□□□□ 0.74
CCL19-202ENST00000378800 IQSEC2Q5JU85 1478 aa19.66■□□□□ 0.74
CCL19-202ENST00000378800 CPS1P31327 1500 aa19.66■□□□□ 0.74
CCL19-202ENST00000378800 SPHKAPQ2M3C7 1700 aa19.64■□□□□ 0.73
CCL19-202ENST00000378800 CLTCL1P53675 1640 aa19.63■□□□□ 0.73
CCL19-202ENST00000378800 LRRC7Q96NW7 1537 aa19.62■□□□□ 0.73
CCL19-202ENST00000378800 RBM33Q96EV2 1170 aaKnown RBP19.62■□□□□ 0.73
CCL19-202ENST00000378800 ADAMTS13Q76LX8 1427 aa19.61■□□□□ 0.73
CCL19-202ENST00000378800 MYO5BQ9ULV0 1848 aa19.6■□□□□ 0.73
CCL19-202ENST00000378800 PROSER2Q86WR7 435 aaPredicted RBP19.6■□□□□ 0.73
CCL19-202ENST00000378800 RGL3Q3MIN7 710 aa19.59■□□□□ 0.73
CCL19-202ENST00000378800 RPGRIP1LQ68CZ1 1315 aa19.58■□□□□ 0.73
CCL19-202ENST00000378800 STRCP1A6NGW2 1772 aa19.58■□□□□ 0.73
CCL19-202ENST00000378800 VGFO15240 615 aaPredicted RBP19.57■□□□□ 0.72
CCL19-202ENST00000378800 TOM1O60784 492 aa19.57■□□□□ 0.72
CCL19-202ENST00000378800 CCDC144AA2RUR9 1427 aa19.57■□□□□ 0.72
CCL19-202ENST00000378800 PIP4K2BP78356 416 aa19.56■□□□□ 0.72
CCL19-202ENST00000378800 TMEM94Q12767 1356 aa19.56■□□□□ 0.72
CCL19-202ENST00000378800 AMOTL2Q9Y2J4 779 aa19.54■□□□□ 0.72
CCL19-202ENST00000378800 SPATA31E1Q6ZUB1 1445 aa19.53■□□□□ 0.72
CCL19-202ENST00000378800 NEXMIFQ5QGS0 1516 aa19.53■□□□□ 0.72
CCL19-202ENST00000378800 ANKRD30BQ9BXX2 1392 aa19.53■□□□□ 0.72
CCL19-202ENST00000378800 PTPRUQ92729 1446 aa19.52■□□□□ 0.72
CCL19-202ENST00000378800 METP08581 1390 aa19.52■□□□□ 0.72
CCL19-202ENST00000378800 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
CCL19-202ENST00000378800 PIK3R4Q99570 1358 aa19.51■□□□□ 0.71
CCL19-202ENST00000378800 ADGRF5Q8IZF2 1346 aa19.51■□□□□ 0.71
CCL19-202ENST00000378800 SETBP1Q9Y6X0 1596 aa19.48■□□□□ 0.71
CCL19-202ENST00000378800 ALKQ9UM73 1620 aa19.47■□□□□ 0.71
CCL19-202ENST00000378800 NWD1Q149M9 1564 aa19.46■□□□□ 0.71
CCL19-202ENST00000378800 NKTRP30414 1462 aaKnown RBP19.46■□□□□ 0.71
CCL19-202ENST00000378800 DIP2AQ14689 1571 aa19.45■□□□□ 0.7
CCL19-202ENST00000378800 NRXN3Q9Y4C0 1643 aa19.45■□□□□ 0.7
CCL19-202ENST00000378800 HSPA1LP34931 641 aa19.45■□□□□ 0.7
CCL19-202ENST00000378800 KIF1BO60333 1816 aa19.44■□□□□ 0.7
CCL19-202ENST00000378800 TRIM26Q12899 539 aaPredicted RBP19.43■□□□□ 0.7
CCL19-202ENST00000378800 C14orf37Q86TY3 774 aa19.41■□□□□ 0.7
CCL19-202ENST00000378800 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
CCL19-202ENST00000378800 CHD2O14647 1828 aaKnown RBP19.41■□□□□ 0.7
CCL19-202ENST00000378800 SLAIN2Q9P270 581 aa19.4■□□□□ 0.7
CCL19-202ENST00000378800 MSH6P52701 1360 aa19.4■□□□□ 0.7
CCL19-202ENST00000378800 NCOA3Q9Y6Q9 1424 aa19.4■□□□□ 0.7
CCL19-202ENST00000378800 TMEM132EQ6IEE7 984 aa19.39■□□□□ 0.69
CCL19-202ENST00000378800 XIRP1Q702N8 1843 aaKnown RBP19.38■□□□□ 0.69
CCL19-202ENST00000378800 KDM2AQ9Y2K7 1162 aa19.38■□□□□ 0.69
CCL19-202ENST00000378800 C14orf93Q9H972 538 aaKnown RBP19.37■□□□□ 0.69
CCL19-202ENST00000378800 ROBO2Q9HCK4 1378 aa19.36■□□□□ 0.69
CCL19-202ENST00000378800 CFAP70Q5T0N1 1121 aa19.36■□□□□ 0.69
CCL19-202ENST00000378800 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
CCL19-202ENST00000378800 STK26Q9P289 416 aa19.36■□□□□ 0.69
CCL19-202ENST00000378800 FAM135BQ49AJ0 1406 aa19.35■□□□□ 0.69
CCL19-202ENST00000378800 ATF3P18847 181 aa19.35■□□□□ 0.69
CCL19-202ENST00000378800 PPLO60437 1756 aa19.34■□□□□ 0.69
CCL19-202ENST00000378800 DHX57Q6P158 1386 aaKnown RBP19.34■□□□□ 0.69
CCL19-202ENST00000378800 CADPS2Q86UW7 1296 aa19.34■□□□□ 0.69
CCL19-202ENST00000378800 PIK3C2GO75747 1445 aa19.34■□□□□ 0.69
CCL19-202ENST00000378800 XRN1Q8IZH2 1706 aaKnown RBP19.32■□□□□ 0.68
CCL19-202ENST00000378800 NRXN1Q9ULB1 1477 aa19.31■□□□□ 0.68
CCL19-202ENST00000378800 WAPLQ7Z5K2 1190 aa19.31■□□□□ 0.68
CCL19-202ENST00000378800 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
CCL19-202ENST00000378800 LRPPRCP42704 1394 aaKnown RBP19.3■□□□□ 0.68
CCL19-202ENST00000378800 ABCC11Q96J66 1382 aa19.29■□□□□ 0.68
CCL19-202ENST00000378800 MYOM2P54296 1465 aa19.28■□□□□ 0.68
CCL19-202ENST00000378800 STAC3Q96MF2 364 aa19.28■□□□□ 0.68
CCL19-202ENST00000378800 SETD1AO15047 1707 aaKnown RBP19.28■□□□□ 0.68
CCL19-202ENST00000378800 PTCH1Q13635 1447 aa19.27■□□□□ 0.68
CCL19-202ENST00000378800 PRAG1Q86YV5 1406 aa19.27■□□□□ 0.68
CCL19-202ENST00000378800 IFT172Q9UG01 1749 aa19.26■□□□□ 0.67
CCL19-202ENST00000378800 ADGRL3Q9HAR2 1447 aa19.25■□□□□ 0.67
CCL19-202ENST00000378800 ASXL1Q8IXJ9 1541 aa19.25■□□□□ 0.67
CCL19-202ENST00000378800 YTHDC2Q9H6S0 1430 aaKnown RBP19.25■□□□□ 0.67
CCL19-202ENST00000378800 PLEKHH1Q9ULM0 1364 aa19.24■□□□□ 0.67
CCL19-202ENST00000378800 NEUROD1Q13562 356 aa19.24■□□□□ 0.67
CCL19-202ENST00000378800 BRINP3Q76B58 766 aa19.24■□□□□ 0.67
CCL19-202ENST00000378800 SIRT1Q96EB6 747 aa19.24■□□□□ 0.67
CCL19-202ENST00000378800 DCCP43146 1447 aa19.24■□□□□ 0.67
CCL19-202ENST00000378800 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.23■□□□□ 0.67
CCL19-202ENST00000378800 TECPR2O15040 1411 aa19.23■□□□□ 0.67
CCL19-202ENST00000378800 L3MBTL2Q969R5 705 aa19.22■□□□□ 0.67
CCL19-202ENST00000378800 MST1RQ04912 1400 aa19.21■□□□□ 0.67
CCL19-202ENST00000378800 TRAK1Q9UPV9 953 aa19.2■□□□□ 0.66
CCL19-202ENST00000378800 DISP3Q9P2K9 1392 aa19.19■□□□□ 0.66
CCL19-202ENST00000378800 PRAM1Q96QH2 718 aa19.19■□□□□ 0.66
CCL19-202ENST00000378800 ORAI2Q96SN7 254 aa19.19■□□□□ 0.66
CCL19-202ENST00000378800 ROBO1Q9Y6N7 1651 aa19.18■□□□□ 0.66
CCL19-202ENST00000378800 SAFB2Q14151 953 aaKnown RBP eCLIP19.18■□□□□ 0.66
CCL19-202ENST00000378800 DDX17Q92841 729 aaKnown RBP19.18■□□□□ 0.66
CCL19-202ENST00000378800 NBPF1Q3BBV0 1214 aa19.16■□□□□ 0.66
CCL19-202ENST00000378800 C1orf167Q5SNV9 1468 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms