RNA–Protein interactions for RNA: ENST00000378702.8

DMD-209, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 2,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-209ENST00000378702 ZNF326Q5BKZ1 582 aaKnown RBP12.94□□□□□ -0.34
DMD-209ENST00000378702 CGNL1Q0VF96 1302 aa12.94□□□□□ -0.34
DMD-209ENST00000378702 ROCK1Q13464 1354 aa12.94□□□□□ -0.34
DMD-209ENST00000378702 TAF3Q5VWG9 929 aa12.94□□□□□ -0.34
DMD-209ENST00000378702 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
DMD-209ENST00000378702 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
DMD-209ENST00000378702 CIZ1Q9ULV3 898 aaPredicted RBP12.93□□□□□ -0.34
DMD-209ENST00000378702 BICRAQ9NZM4 1560 aa12.93□□□□□ -0.34
DMD-209ENST00000378702 PER1O15534 1290 aaPredicted RBP12.93□□□□□ -0.34
DMD-209ENST00000378702 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
DMD-209ENST00000378702 MCM5P33992 734 aa12.92□□□□□ -0.34
DMD-209ENST00000378702 RSPH4AQ5TD94 716 aa12.92□□□□□ -0.34
DMD-209ENST00000378702 PDLIM2Q96JY6 352 aa12.92□□□□□ -0.34
DMD-209ENST00000378702 EPRSP07814 1512 aaKnown RBP12.92□□□□□ -0.34
DMD-209ENST00000378702 CLUAP1Q96AJ1 413 aa12.92□□□□□ -0.34
DMD-209ENST00000378702 CARD11Q9BXL7 1154 aa12.92□□□□□ -0.34
DMD-209ENST00000378702 ST20-MTHFSA0A0A6YYL1 179 aa12.92□□□□□ -0.34
DMD-209ENST00000378702 HSCBQ8IWL3 235 aa12.92□□□□□ -0.34
DMD-209ENST00000378702 ZKSCAN5Q9Y2L8 839 aa12.92□□□□□ -0.34
DMD-209ENST00000378702 NINLQ9Y2I6 1382 aa12.91□□□□□ -0.34
DMD-209ENST00000378702 PZPP20742 1482 aa12.91□□□□□ -0.34
DMD-209ENST00000378702 RAB3GAP1Q15042 981 aa12.91□□□□□ -0.34
DMD-209ENST00000378702 C22orf23Q9BZE7 217 aa12.91□□□□□ -0.34
DMD-209ENST00000378702 MAGI3Q5TCQ9 1506 aa12.91□□□□□ -0.34
DMD-209ENST00000378702 SLFN5Q08AF3 891 aa12.91□□□□□ -0.34
DMD-209ENST00000378702 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
DMD-209ENST00000378702 ZNF830Q96NB3 372 aaPredicted RBP12.9□□□□□ -0.34
DMD-209ENST00000378702 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
DMD-209ENST00000378702 PDE3AQ14432 1141 aa12.9□□□□□ -0.35
DMD-209ENST00000378702 SMC5Q8IY18 1101 aa12.9□□□□□ -0.35
DMD-209ENST00000378702 ARHGEF12Q9NZN5 1544 aa12.89□□□□□ -0.35
DMD-209ENST00000378702 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
DMD-209ENST00000378702 SAMD9Q5K651 1589 aa12.88□□□□□ -0.35
DMD-209ENST00000378702 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
DMD-209ENST00000378702 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
DMD-209ENST00000378702 ZNF445P59923 1031 aa12.88□□□□□ -0.35
DMD-209ENST00000378702 ARHGAP31Q2M1Z3 1444 aa12.87□□□□□ -0.35
DMD-209ENST00000378702 KLHL40Q2TBA0 621 aa12.87□□□□□ -0.35
DMD-209ENST00000378702 PANK3Q9H999 370 aa12.87□□□□□ -0.35
DMD-209ENST00000378702 BCAR3O75815 825 aa12.87□□□□□ -0.35
DMD-209ENST00000378702 CBX1P83916 185 aa12.87□□□□□ -0.35
DMD-209ENST00000378702 PMFBP1Q8TBY8 1022 aa12.87□□□□□ -0.35
DMD-209ENST00000378702 SNX21Q969T3 373 aa12.87□□□□□ -0.35
DMD-209ENST00000378702 ANKRD30AQ9BXX3 1397 aa12.86□□□□□ -0.35
DMD-209ENST00000378702 ZNF710Q8N1W2 664 aa12.86□□□□□ -0.35
DMD-209ENST00000378702 VGLL3A8MV65 326 aa12.86□□□□□ -0.35
DMD-209ENST00000378702 DAPK1P53355 1430 aa12.86□□□□□ -0.35
DMD-209ENST00000378702 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
DMD-209ENST00000378702 RBM25P49756 843 aaKnown RBP12.85□□□□□ -0.35
DMD-209ENST00000378702 CLEC17AQ6ZS10 378 aa12.85□□□□□ -0.35
DMD-209ENST00000378702 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
DMD-209ENST00000378702 DNMT1P26358 1616 aaKnown RBP12.85□□□□□ -0.35
DMD-209ENST00000378702 PLXNC1O60486 1568 aa12.85□□□□□ -0.35
DMD-209ENST00000378702 PRDM2Q13029 1718 aa12.85□□□□□ -0.35
DMD-209ENST00000378702 HSP90AB1P08238 724 aaKnown RBP12.84□□□□□ -0.35
DMD-209ENST00000378702 GTF2F1P35269 517 aaKnown RBP eCLIP12.84□□□□□ -0.35
DMD-209ENST00000378702 ATP2B3Q16720 1220 aa12.84□□□□□ -0.35
DMD-209ENST00000378702 CC2D1BQ5T0F9 858 aaKnown RBP12.84□□□□□ -0.35
DMD-209ENST00000378702 MFAP1P55081 439 aaKnown RBP12.83□□□□□ -0.36
DMD-209ENST00000378702 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
DMD-209ENST00000378702 GOLGA6L22H0YM25 854 aa12.83□□□□□ -0.36
DMD-209ENST00000378702 CCDC39Q9UFE4 941 aa12.83□□□□□ -0.36
DMD-209ENST00000378702 PRIMPOLQ96LW4 560 aa12.82□□□□□ -0.36
DMD-209ENST00000378702 VGFO15240 615 aaPredicted RBP12.82□□□□□ -0.36
DMD-209ENST00000378702 AEBP2Q6ZN18 517 aaPredicted RBP12.82□□□□□ -0.36
DMD-209ENST00000378702 COG6Q9Y2V7 657 aa12.82□□□□□ -0.36
DMD-209ENST00000378702 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
DMD-209ENST00000378702 COL17A1Q9UMD9 1497 aaPredicted RBP12.81□□□□□ -0.36
DMD-209ENST00000378702 SHROOM2Q13796 1616 aa12.81□□□□□ -0.36
DMD-209ENST00000378702 PLCD3Q8N3E9 789 aa12.81□□□□□ -0.36
DMD-209ENST00000378702 RBSNQ9H1K0 784 aa12.81□□□□□ -0.36
DMD-209ENST00000378702 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
DMD-209ENST00000378702 CUL7Q14999 1698 aa12.8□□□□□ -0.36
DMD-209ENST00000378702 CDK11BP21127 795 aaKnown RBP12.8□□□□□ -0.36
DMD-209ENST00000378702 HMGN5P82970 282 aaKnown RBP12.8□□□□□ -0.36
DMD-209ENST00000378702 WDR43Q15061 677 aaKnown RBP eCLIP12.8□□□□□ -0.36
DMD-209ENST00000378702 ABCC5O15440 1437 aa12.8□□□□□ -0.36
DMD-209ENST00000378702 CAMSAP2Q08AD1 1489 aa12.8□□□□□ -0.36
DMD-209ENST00000378702 PANK1Q8TE04 598 aa12.8□□□□□ -0.36
DMD-209ENST00000378702 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
DMD-209ENST00000378702 CGNQ9P2M7 1197 aaKnown RBP12.8□□□□□ -0.36
DMD-209ENST00000378702 KIAA0586Q9BVV6 1533 aa12.8□□□□□ -0.36
DMD-209ENST00000378702 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
DMD-209ENST00000378702 E9PSI1 815 aa12.79□□□□□ -0.36
DMD-209ENST00000378702 SLC20A2Q08357 652 aa12.79□□□□□ -0.36
DMD-209ENST00000378702 ZSCAN23Q3MJ62 389 aa12.79□□□□□ -0.36
DMD-209ENST00000378702 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
DMD-209ENST00000378702 FAM135AQ9P2D6 1515 aa12.78□□□□□ -0.36
DMD-209ENST00000378702 KIAA2012Q0VF49 1180 aa12.78□□□□□ -0.36
DMD-209ENST00000378702 CEP170Q5SW79 1584 aa12.78□□□□□ -0.36
DMD-209ENST00000378702 ABCC2Q92887 1545 aa12.78□□□□□ -0.36
DMD-209ENST00000378702 ZBTB22O15209 634 aa12.77□□□□□ -0.36
DMD-209ENST00000378702 NBPF1Q3BBV0 1214 aa12.77□□□□□ -0.36
DMD-209ENST00000378702 BAG4O95429 457 aaKnown RBP12.77□□□□□ -0.37
DMD-209ENST00000378702 DNTTIP2Q5QJE6 756 aaKnown RBP12.77□□□□□ -0.37
DMD-209ENST00000378702 JARID2Q92833 1246 aaPredicted RBP12.77□□□□□ -0.37
DMD-209ENST00000378702 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
DMD-209ENST00000378702 SSFA2P28290 1259 aa12.76□□□□□ -0.37
DMD-209ENST00000378702 TSC1Q92574 1164 aa12.76□□□□□ -0.37
DMD-209ENST00000378702 RWDD1Q9H446 243 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms