RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 E2F4Q16254 413 aa8.78□□□□□ -1
CDKAL1-202ENST00000378610 FAM50AQ14320 339 aaKnown RBP8.77□□□□□ -1.01
CDKAL1-202ENST00000378610 MCM6Q14566 821 aa8.77□□□□□ -1.01
CDKAL1-202ENST00000378610 CERS3Q8IU89 383 aa8.77□□□□□ -1.01
CDKAL1-202ENST00000378610 ANKRD30BQ9BXX2 1392 aa8.77□□□□□ -1.01
CDKAL1-202ENST00000378610 RRP1P56182 461 aaKnown RBP8.77□□□□□ -1.01
CDKAL1-202ENST00000378610 FNBP4Q8N3X1 1017 aaPredicted RBP8.77□□□□□ -1.01
CDKAL1-202ENST00000378610 PNISRQ8TF01 805 aaKnown RBP8.77□□□□□ -1.01
CDKAL1-202ENST00000378610 FAM9BQ8IZU0 186 aa8.76□□□□□ -1.01
CDKAL1-202ENST00000378610 DCAF11Q8TEB1 546 aa8.76□□□□□ -1.01
CDKAL1-202ENST00000378610 POM121Q96HA1 1249 aa8.76□□□□□ -1.01
CDKAL1-202ENST00000378610 TOPBP1Q92547 1522 aa8.76□□□□□ -1.01
CDKAL1-202ENST00000378610 ZFP91Q96JP5 570 aaPredicted RBP8.76□□□□□ -1.01
CDKAL1-202ENST00000378610 LAS1LQ9Y4W2 734 aaKnown RBP8.76□□□□□ -1.01
CDKAL1-202ENST00000378610 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.76□□□□□ -1.01
CDKAL1-202ENST00000378610 RBM26Q5T8P6 1007 aaKnown RBP8.76□□□□□ -1.01
CDKAL1-202ENST00000378610 ARIH1Q9Y4X5 557 aaPredicted RBP8.76□□□□□ -1.01
CDKAL1-202ENST00000378610 ZNF592Q92610 1267 aa8.75□□□□□ -1.01
CDKAL1-202ENST00000378610 FHOD3Q2V2M9 1422 aa8.75□□□□□ -1.01
CDKAL1-202ENST00000378610 FANCD2Q9BXW9 1451 aa8.75□□□□□ -1.01
CDKAL1-202ENST00000378610 DNMT1P26358 1616 aaKnown RBP8.75□□□□□ -1.01
CDKAL1-202ENST00000378610 KDM2BQ8NHM5 1336 aa8.75□□□□□ -1.01
CDKAL1-202ENST00000378610 UHRF1BP1Q6BDS2 1440 aa8.74□□□□□ -1.01
CDKAL1-202ENST00000378610 IGSF5Q9NSI5 407 aa8.74□□□□□ -1.01
CDKAL1-202ENST00000378610 POLA1P09884 1462 aaPredicted RBP8.73□□□□□ -1.01
CDKAL1-202ENST00000378610 BRD4O60885 1362 aaPredicted RBP8.73□□□□□ -1.01
CDKAL1-202ENST00000378610 BLMP54132 1417 aaPredicted RBP8.73□□□□□ -1.01
CDKAL1-202ENST00000378610 ROCK1Q13464 1354 aa8.73□□□□□ -1.01
CDKAL1-202ENST00000378610 SMYD5Q6GMV2 418 aa8.73□□□□□ -1.01
CDKAL1-202ENST00000378610 ADGBQ8N7X0 1667 aa8.73□□□□□ -1.01
CDKAL1-202ENST00000378610 GPIHBP1Q8IV16 184 aa8.72□□□□□ -1.01
CDKAL1-202ENST00000378610 PLEKHH2Q8IVE3 1493 aa8.72□□□□□ -1.01
CDKAL1-202ENST00000378610 NBPF8Q3BBV2 869 aa8.72□□□□□ -1.01
CDKAL1-202ENST00000378610 ZNF608Q9ULD9 1512 aaPredicted RBP8.72□□□□□ -1.01
CDKAL1-202ENST00000378610 CROCC2H7BZ55 1655 aa8.72□□□□□ -1.01
CDKAL1-202ENST00000378610 ROCK2O75116 1388 aaKnown RBP8.72□□□□□ -1.01
CDKAL1-202ENST00000378610 PLSCR2Q9NRY7 297 aa8.71□□□□□ -1.01
CDKAL1-202ENST00000378610 RALGAPBQ86X10 1494 aa8.71□□□□□ -1.01
CDKAL1-202ENST00000378610 NLRP1Q9C000 1473 aa8.71□□□□□ -1.01
CDKAL1-202ENST00000378610 CAPN15O75808 1086 aa8.71□□□□□ -1.01
CDKAL1-202ENST00000378610 CLASP1Q7Z460 1538 aa8.71□□□□□ -1.02
CDKAL1-202ENST00000378610 LAMC1P11047 1609 aa8.71□□□□□ -1.02
CDKAL1-202ENST00000378610 EXOC6Q8TAG9 804 aa8.71□□□□□ -1.02
CDKAL1-202ENST00000378610 L3MBTL2Q969R5 705 aa8.71□□□□□ -1.02
CDKAL1-202ENST00000378610 PDE3BQ13370 1112 aa8.7□□□□□ -1.02
CDKAL1-202ENST00000378610 CCDC27Q2M243 656 aa8.7□□□□□ -1.02
CDKAL1-202ENST00000378610 RRAGDQ9NQL2 400 aaPredicted RBP8.7□□□□□ -1.02
CDKAL1-202ENST00000378610 ARHGEF12Q9NZN5 1544 aa8.7□□□□□ -1.02
CDKAL1-202ENST00000378610 CEP170Q5SW79 1584 aa8.7□□□□□ -1.02
CDKAL1-202ENST00000378610 RRP9O43818 475 aaKnown RBP8.69□□□□□ -1.02
CDKAL1-202ENST00000378610 SMARCA5O60264 1052 aaPredicted RBP8.69□□□□□ -1.02
CDKAL1-202ENST00000378610 BCCIPQ9P287 314 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDKAL1-202ENST00000378610 CCDC144AA2RUR9 1427 aa8.69□□□□□ -1.02
CDKAL1-202ENST00000378610 OSCARQ8IYS5 282 aa8.69□□□□□ -1.02
CDKAL1-202ENST00000378610 CENPJQ9HC77 1338 aaPredicted RBP8.69□□□□□ -1.02
CDKAL1-202ENST00000378610 PZPP20742 1482 aa8.69□□□□□ -1.02
CDKAL1-202ENST00000378610 C8orf34Q49A92 452 aa8.69□□□□□ -1.02
CDKAL1-202ENST00000378610 TARBP1Q13395 1621 aaKnown RBP8.68□□□□□ -1.02
CDKAL1-202ENST00000378610 GLIPR1L2Q4G1C9 344 aa8.68□□□□□ -1.02
CDKAL1-202ENST00000378610 NESP48681 1621 aa8.68□□□□□ -1.02
CDKAL1-202ENST00000378610 TMED8Q6PL24 325 aaPredicted RBP8.68□□□□□ -1.02
CDKAL1-202ENST00000378610 PBRM1Q86U86 1689 aa8.67□□□□□ -1.02
CDKAL1-202ENST00000378610 PARD3Q8TEW0 1356 aa8.67□□□□□ -1.02
CDKAL1-202ENST00000378610 PSMD1Q99460 953 aa8.67□□□□□ -1.02
CDKAL1-202ENST00000378610 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.67□□□□□ -1.02
CDKAL1-202ENST00000378610 KIF15Q9NS87 1388 aa8.67□□□□□ -1.02
CDKAL1-202ENST00000378610 CLCN1P35523 988 aa8.67□□□□□ -1.02
CDKAL1-202ENST00000378610 RCAN3Q9UKA8 241 aa8.67□□□□□ -1.02
CDKAL1-202ENST00000378610 KDM4AO75164 1064 aa8.66□□□□□ -1.02
CDKAL1-202ENST00000378610 MPHOSPH9Q99550 1183 aa8.66□□□□□ -1.02
CDKAL1-202ENST00000378610 FSD2A1L4K1 749 aa8.66□□□□□ -1.02
CDKAL1-202ENST00000378610 SHROOM2Q13796 1616 aa8.65□□□□□ -1.02
CDKAL1-202ENST00000378610 TRPM1Q7Z4N2 1603 aa8.65□□□□□ -1.02
CDKAL1-202ENST00000378610 FRAT2O75474 233 aaPredicted RBP8.65□□□□□ -1.02
CDKAL1-202ENST00000378610 URB2Q14146 1524 aaKnown RBP8.65□□□□□ -1.03
CDKAL1-202ENST00000378610 KDM5DQ9BY66 1539 aa8.65□□□□□ -1.03
CDKAL1-202ENST00000378610 TICAM2Q86XR7 235 aa8.65□□□□□ -1.03
CDKAL1-202ENST00000378610 SGIP1Q9BQI5 828 aa8.65□□□□□ -1.03
CDKAL1-202ENST00000378610 USP19O94966 1318 aa8.65□□□□□ -1.03
CDKAL1-202ENST00000378610 MYBBP1AQ9BQG0 1328 aaKnown RBP8.64□□□□□ -1.03
CDKAL1-202ENST00000378610 MTUS2Q5JR59 1369 aa8.64□□□□□ -1.03
CDKAL1-202ENST00000378610 ZMYM3Q14202 1370 aa8.64□□□□□ -1.03
CDKAL1-202ENST00000378610 USP47Q96K76 1375 aa8.64□□□□□ -1.03
CDKAL1-202ENST00000378610 KCNA1Q09470 495 aa8.63□□□□□ -1.03
CDKAL1-202ENST00000378610 PLXNC1O60486 1568 aa8.63□□□□□ -1.03
CDKAL1-202ENST00000378610 DAPK1P53355 1430 aa8.63□□□□□ -1.03
CDKAL1-202ENST00000378610 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
CDKAL1-202ENST00000378610 ITSN2Q9NZM3 1697 aa8.63□□□□□ -1.03
CDKAL1-202ENST00000378610 ADGRL2O95490 1459 aa8.63□□□□□ -1.03
CDKAL1-202ENST00000378610 MLLT3P42568 568 aaPredicted RBP8.63□□□□□ -1.03
CDKAL1-202ENST00000378610 CC2D2BQ6DHV5 1058 aa8.63□□□□□ -1.03
CDKAL1-202ENST00000378610 ANTXR1Q9H6X2 564 aa8.63□□□□□ -1.03
CDKAL1-202ENST00000378610 GOPCQ9HD26 462 aa8.63□□□□□ -1.03
CDKAL1-202ENST00000378610 RALBP1Q15311 655 aa8.62□□□□□ -1.03
CDKAL1-202ENST00000378610 PARP9Q8IXQ6 854 aa8.62□□□□□ -1.03
CDKAL1-202ENST00000378610 WDR62O43379 1518 aa8.62□□□□□ -1.03
CDKAL1-202ENST00000378610 ADAMTS12P58397 1594 aa8.62□□□□□ -1.03
CDKAL1-202ENST00000378610 BRD1O95696 1058 aa8.62□□□□□ -1.03
CDKAL1-202ENST00000378610 L1TD1Q5T7N2 865 aaKnown RBP8.62□□□□□ -1.03
CDKAL1-202ENST00000378610 RAD54L2Q9Y4B4 1467 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms