RNA–Protein interactions for RNA: ENST00000378549.5

ITM2B-201, Transcript of integral membrane protein 2B, humanhuman

TSL 5 BASIC

Gene ITM2B, Length 805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-201ENST00000378549 ZNF326Q5BKZ1 582 aaKnown RBP25.27■■□□□ 1.64
ITM2B-201ENST00000378549 TXNDC2Q86VQ3 553 aa25.27■■□□□ 1.64
ITM2B-201ENST00000378549 PPLO60437 1756 aa25.26■■□□□ 1.63
ITM2B-201ENST00000378549 HDGFP51858 240 aaKnown RBP25.26■■□□□ 1.63
ITM2B-201ENST00000378549 NPHP4O75161 1426 aaPredicted RBP25.26■■□□□ 1.63
ITM2B-201ENST00000378549 NEXMIFQ5QGS0 1516 aa25.24■■□□□ 1.63
ITM2B-201ENST00000378549 DHX57Q6P158 1386 aaKnown RBP25.24■■□□□ 1.63
ITM2B-201ENST00000378549 IFT172Q9UG01 1749 aa25.23■■□□□ 1.63
ITM2B-201ENST00000378549 PPP1R15AO75807 674 aaPredicted RBP25.23■■□□□ 1.63
ITM2B-201ENST00000378549 LTKP29376 864 aa25.23■■□□□ 1.63
ITM2B-201ENST00000378549 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.23■■□□□ 1.63
ITM2B-201ENST00000378549 SPATA31E1Q6ZUB1 1445 aa25.21■■□□□ 1.63
ITM2B-201ENST00000378549 PLEKHG1Q9ULL1 1385 aa25.17■■□□□ 1.62
ITM2B-201ENST00000378549 RPGRIP1LQ68CZ1 1315 aa25.16■■□□□ 1.62
ITM2B-201ENST00000378549 NUTM2DQ5VT03 806 aaPredicted RBP25.16■■□□□ 1.62
ITM2B-201ENST00000378549 RGL3Q3MIN7 710 aa25.15■■□□□ 1.62
ITM2B-201ENST00000378549 BCANQ96GW7 911 aa25.15■■□□□ 1.62
ITM2B-201ENST00000378549 DIP2AQ14689 1571 aa25.12■■□□□ 1.61
ITM2B-201ENST00000378549 SETBP1Q9Y6X0 1596 aa25.11■■□□□ 1.61
ITM2B-201ENST00000378549 NRXN3Q9Y4C0 1643 aa25.11■■□□□ 1.61
ITM2B-201ENST00000378549 VGFO15240 615 aaPredicted RBP25.09■■□□□ 1.61
ITM2B-201ENST00000378549 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
ITM2B-201ENST00000378549 SLC26A8Q96RN1 970 aa25.06■■□□□ 1.6
ITM2B-201ENST00000378549 MYOM2P54296 1465 aa25.05■■□□□ 1.6
ITM2B-201ENST00000378549 STRCP1A6NGW2 1772 aa25.05■■□□□ 1.6
ITM2B-201ENST00000378549 CHD2O14647 1828 aaKnown RBP25.05■■□□□ 1.6
ITM2B-201ENST00000378549 ADAMTS13Q76LX8 1427 aa25.04■■□□□ 1.6
ITM2B-201ENST00000378549 ZNF335Q9H4Z2 1342 aaPredicted RBP25.04■■□□□ 1.6
ITM2B-201ENST00000378549 SETD1AO15047 1707 aaKnown RBP25.03■■□□□ 1.6
ITM2B-201ENST00000378549 LTBP4Q8N2S1 1624 aa25.01■■□□□ 1.59
ITM2B-201ENST00000378549 SIN3AQ96ST3 1273 aa25.01■■□□□ 1.59
ITM2B-201ENST00000378549 LAMC1P11047 1609 aa25.01■■□□□ 1.59
ITM2B-201ENST00000378549 NEUROD1Q13562 356 aa25■■□□□ 1.59
ITM2B-201ENST00000378549 TBX22Q9Y458 520 aa25■■□□□ 1.59
ITM2B-201ENST00000378549 CPS1P31327 1500 aa24.99■■□□□ 1.59
ITM2B-201ENST00000378549 NWD1Q149M9 1564 aa24.99■■□□□ 1.59
ITM2B-201ENST00000378549 ADGRF5Q8IZF2 1346 aa24.99■■□□□ 1.59
ITM2B-201ENST00000378549 ALKQ9UM73 1620 aa24.99■■□□□ 1.59
ITM2B-201ENST00000378549 PIK3C2GO75747 1445 aa24.98■■□□□ 1.59
ITM2B-201ENST00000378549 NRXN1Q9ULB1 1477 aa24.97■■□□□ 1.59
ITM2B-201ENST00000378549 DCAF11Q8TEB1 546 aa24.97■■□□□ 1.59
ITM2B-201ENST00000378549 PIK3R4Q99570 1358 aa24.96■■□□□ 1.59
ITM2B-201ENST00000378549 STAC3Q96MF2 364 aa24.95■■□□□ 1.58
ITM2B-201ENST00000378549 KDM2AQ9Y2K7 1162 aa24.94■■□□□ 1.58
ITM2B-201ENST00000378549 CLSPNQ9HAW4 1339 aa24.93■■□□□ 1.58
ITM2B-201ENST00000378549 XRN1Q8IZH2 1706 aaKnown RBP24.92■■□□□ 1.58
ITM2B-201ENST00000378549 NKTRP30414 1462 aaKnown RBP24.92■■□□□ 1.58
ITM2B-201ENST00000378549 CCER1Q8TC90 406 aaPredicted RBP24.92■■□□□ 1.58
ITM2B-201ENST00000378549 KCNA6P17658 529 aa24.91■■□□□ 1.58
ITM2B-201ENST00000378549 METP08581 1390 aa24.9■■□□□ 1.58
ITM2B-201ENST00000378549 TONSLQ96HA7 1378 aa24.9■■□□□ 1.58
ITM2B-201ENST00000378549 XIRP1Q702N8 1843 aaKnown RBP24.89■■□□□ 1.58
ITM2B-201ENST00000378549 L3MBTL2Q969R5 705 aa24.88■■□□□ 1.57
ITM2B-201ENST00000378549 KIAA1210Q9ULL0 1709 aa24.88■■□□□ 1.57
ITM2B-201ENST00000378549 IQSEC2Q5JU85 1478 aa24.86■■□□□ 1.57
ITM2B-201ENST00000378549 CERKQ8TCT0 537 aa24.86■■□□□ 1.57
ITM2B-201ENST00000378549 LRRC7Q96NW7 1537 aa24.86■■□□□ 1.57
ITM2B-201ENST00000378549 PTPRUQ92729 1446 aa24.86■■□□□ 1.57
ITM2B-201ENST00000378549 KNDC1Q76NI1 1749 aa24.85■■□□□ 1.57
ITM2B-201ENST00000378549 ASXL1Q8IXJ9 1541 aa24.85■■□□□ 1.57
ITM2B-201ENST00000378549 C14orf93Q9H972 538 aaKnown RBP24.83■■□□□ 1.57
ITM2B-201ENST00000378549 AMOTL2Q9Y2J4 779 aa24.83■■□□□ 1.57
ITM2B-201ENST00000378549 PRAG1Q86YV5 1406 aa24.83■■□□□ 1.57
ITM2B-201ENST00000378549 CFAP70Q5T0N1 1121 aa24.82■■□□□ 1.56
ITM2B-201ENST00000378549 PROSER2Q86WR7 435 aaPredicted RBP24.8■■□□□ 1.56
ITM2B-201ENST00000378549 TRPM1Q7Z4N2 1603 aa24.79■■□□□ 1.56
ITM2B-201ENST00000378549 ADGRB1O14514 1584 aa24.78■■□□□ 1.56
ITM2B-201ENST00000378549 PTCH1Q13635 1447 aa24.78■■□□□ 1.56
ITM2B-201ENST00000378549 TMEM132EQ6IEE7 984 aa24.77■■□□□ 1.56
ITM2B-201ENST00000378549 TMEM94Q12767 1356 aa24.77■■□□□ 1.56
ITM2B-201ENST00000378549 YTHDC2Q9H6S0 1430 aaKnown RBP24.77■■□□□ 1.56
ITM2B-201ENST00000378549 LRPPRCP42704 1394 aaKnown RBP24.76■■□□□ 1.55
ITM2B-201ENST00000378549 TECPR2O15040 1411 aa24.74■■□□□ 1.55
ITM2B-201ENST00000378549 STK26Q9P289 416 aa24.73■■□□□ 1.55
ITM2B-201ENST00000378549 NALCNQ8IZF0 1738 aa24.72■■□□□ 1.55
ITM2B-201ENST00000378549 NCOA3Q9Y6Q9 1424 aa24.72■■□□□ 1.55
ITM2B-201ENST00000378549 ABCC11Q96J66 1382 aa24.71■■□□□ 1.55
ITM2B-201ENST00000378549 C14orf37Q86TY3 774 aa24.71■■□□□ 1.55
ITM2B-201ENST00000378549 RBM33Q96EV2 1170 aaKnown RBP24.71■■□□□ 1.55
ITM2B-201ENST00000378549 ROBO2Q9HCK4 1378 aa24.7■■□□□ 1.55
ITM2B-201ENST00000378549 ARHGEF28Q8N1W1 1705 aaKnown RBP24.7■■□□□ 1.54
ITM2B-201ENST00000378549 TIMELESSQ9UNS1 1208 aa24.7■■□□□ 1.54
ITM2B-201ENST00000378549 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.69■■□□□ 1.54
ITM2B-201ENST00000378549 MSH6P52701 1360 aa24.69■■□□□ 1.54
ITM2B-201ENST00000378549 DLC1Q96QB1 1528 aa24.69■■□□□ 1.54
ITM2B-201ENST00000378549 FAM135BQ49AJ0 1406 aa24.65■■□□□ 1.54
ITM2B-201ENST00000378549 ADGRL3Q9HAR2 1447 aa24.65■■□□□ 1.54
ITM2B-201ENST00000378549 ROCK2O75116 1388 aaKnown RBP24.65■■□□□ 1.54
ITM2B-201ENST00000378549 NBPF8Q3BBV2 869 aa24.64■■□□□ 1.54
ITM2B-201ENST00000378549 RALGAPBQ86X10 1494 aa24.64■■□□□ 1.53
ITM2B-201ENST00000378549 UBAP1LF5GYI3 381 aa24.63■■□□□ 1.53
ITM2B-201ENST00000378549 NBPF1Q3BBV0 1214 aa24.63■■□□□ 1.53
ITM2B-201ENST00000378549 TRAK1Q9UPV9 953 aa24.63■■□□□ 1.53
ITM2B-201ENST00000378549 TOM1O60784 492 aa24.61■■□□□ 1.53
ITM2B-201ENST00000378549 SIRT1Q96EB6 747 aa24.61■■□□□ 1.53
ITM2B-201ENST00000378549 C19orf44Q9H6X5 657 aa24.61■■□□□ 1.53
ITM2B-201ENST00000378549 DCCP43146 1447 aa24.61■■□□□ 1.53
ITM2B-201ENST00000378549 WAPLQ7Z5K2 1190 aa24.59■■□□□ 1.53
ITM2B-201ENST00000378549 FBXO41Q8TF61 875 aa24.59■■□□□ 1.53
ITM2B-201ENST00000378549 POGKQ9P215 609 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms