RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 GORABQ5T7V8 394 aa13.99□□□□□ -0.17
RPGR-203ENST00000378505 NBPF1Q3BBV0 1214 aa13.98□□□□□ -0.17
RPGR-203ENST00000378505 KIF16BQ96L93 1317 aa13.98□□□□□ -0.17
RPGR-203ENST00000378505 CSPP1Q1MSJ5 1256 aa13.98□□□□□ -0.17
RPGR-203ENST00000378505 CFAP70Q5T0N1 1121 aa13.98□□□□□ -0.17
RPGR-203ENST00000378505 CYB5RLQ6IPT4 315 aa13.98□□□□□ -0.17
RPGR-203ENST00000378505 CDCA7LQ96GN5 454 aa13.97□□□□□ -0.17
RPGR-203ENST00000378505 PNISRQ8TF01 805 aaKnown RBP13.97□□□□□ -0.17
RPGR-203ENST00000378505 C9orf84Q5VXU9 1444 aa13.97□□□□□ -0.17
RPGR-203ENST00000378505 CHMP3Q9Y3E7 222 aa13.97□□□□□ -0.17
RPGR-203ENST00000378505 PPP2R1AP30153 589 aa13.96□□□□□ -0.17
RPGR-203ENST00000378505 NOL8Q76FK4 1167 aaKnown RBP13.96□□□□□ -0.17
RPGR-203ENST00000378505 PRG4Q92954 1404 aaPredicted RBP13.96□□□□□ -0.18
RPGR-203ENST00000378505 NAIPQ13075 1403 aa13.95□□□□□ -0.18
RPGR-203ENST00000378505 MTHFSP49914 203 aa13.95□□□□□ -0.18
RPGR-203ENST00000378505 GNAI1P63096 354 aa13.95□□□□□ -0.18
RPGR-203ENST00000378505 ARHGAP5Q13017 1502 aa13.95□□□□□ -0.18
RPGR-203ENST00000378505 GGNBP2Q9H3C7 697 aa13.95□□□□□ -0.18
RPGR-203ENST00000378505 TMEM132EQ6IEE7 984 aa13.95□□□□□ -0.18
RPGR-203ENST00000378505 TEFQ10587 303 aa13.95□□□□□ -0.18
RPGR-203ENST00000378505 SKOR2Q2VWA4 1001 aaPredicted RBP13.94□□□□□ -0.18
RPGR-203ENST00000378505 TAF7LQ5H9L4 462 aa13.94□□□□□ -0.18
RPGR-203ENST00000378505 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
RPGR-203ENST00000378505 RILPL2Q969X0 211 aa13.94□□□□□ -0.18
RPGR-203ENST00000378505 REC8O95072 547 aa13.94□□□□□ -0.18
RPGR-203ENST00000378505 TCP11L2Q8N4U5 519 aa13.94□□□□□ -0.18
RPGR-203ENST00000378505 PANK1Q8TE04 598 aa13.94□□□□□ -0.18
RPGR-203ENST00000378505 DDX49Q9Y6V7 483 aaKnown RBP13.94□□□□□ -0.18
RPGR-203ENST00000378505 WDR97A6NE52 1622 aa13.94□□□□□ -0.18
RPGR-203ENST00000378505 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
RPGR-203ENST00000378505 PHF14O94880 888 aa13.93□□□□□ -0.18
RPGR-203ENST00000378505 DAPK1P53355 1430 aa13.93□□□□□ -0.18
RPGR-203ENST00000378505 CHMP5Q9NZZ3 219 aa13.92□□□□□ -0.18
RPGR-203ENST00000378505 MRC2Q9UBG0 1479 aa13.92□□□□□ -0.18
RPGR-203ENST00000378505 CABP2Q9NPB3 220 aa13.92□□□□□ -0.18
RPGR-203ENST00000378505 KIF3AQ9Y496 699 aa13.92□□□□□ -0.18
RPGR-203ENST00000378505 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
RPGR-203ENST00000378505 HSP90B1P14625 803 aaKnown RBP13.92□□□□□ -0.18
RPGR-203ENST00000378505 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
RPGR-203ENST00000378505 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
RPGR-203ENST00000378505 DNMBPQ6XZF7 1577 aa13.91□□□□□ -0.18
RPGR-203ENST00000378505 HECW1Q76N89 1606 aa13.9□□□□□ -0.18
RPGR-203ENST00000378505 LNPKQ9C0E8 428 aa13.9□□□□□ -0.18
RPGR-203ENST00000378505 CCDC184Q52MB2 194 aa13.9□□□□□ -0.18
RPGR-203ENST00000378505 ATP6V1DQ9Y5K8 247 aa13.9□□□□□ -0.19
RPGR-203ENST00000378505 PDE3AQ14432 1141 aa13.89□□□□□ -0.19
RPGR-203ENST00000378505 FOXD4L5Q5VV16 416 aaPredicted RBP13.89□□□□□ -0.19
RPGR-203ENST00000378505 FOXD4L4Q8WXT5 416 aaPredicted RBP13.89□□□□□ -0.19
RPGR-203ENST00000378505 HMOX1P09601 288 aa13.89□□□□□ -0.19
RPGR-203ENST00000378505 ABCA10Q8WWZ4 1543 aa13.89□□□□□ -0.19
RPGR-203ENST00000378505 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
RPGR-203ENST00000378505 CCDC34Q96HJ3 373 aa13.88□□□□□ -0.19
RPGR-203ENST00000378505 TULP1O00294 542 aaPredicted RBP13.88□□□□□ -0.19
RPGR-203ENST00000378505 C22orf23Q9BZE7 217 aa13.88□□□□□ -0.19
RPGR-203ENST00000378505 EPRSP07814 1512 aaKnown RBP13.88□□□□□ -0.19
RPGR-203ENST00000378505 MAP3K1Q13233 1512 aa13.88□□□□□ -0.19
RPGR-203ENST00000378505 SCAPERQ9BY12 1400 aa13.88□□□□□ -0.19
RPGR-203ENST00000378505 FKBP5Q13451 457 aaPredicted RBP13.87□□□□□ -0.19
RPGR-203ENST00000378505 RUFY2Q8WXA3 655 aa13.87□□□□□ -0.19
RPGR-203ENST00000378505 DIAPH3Q9NSV4 1193 aa13.87□□□□□ -0.19
RPGR-203ENST00000378505 FAM69CQ0P6D2 419 aa13.87□□□□□ -0.19
RPGR-203ENST00000378505 EIF2S2P20042 333 aaKnown RBP13.87□□□□□ -0.19
RPGR-203ENST00000378505 TPM4P67936 248 aa13.87□□□□□ -0.19
RPGR-203ENST00000378505 NEXNQ0ZGT2 675 aa13.87□□□□□ -0.19
RPGR-203ENST00000378505 C9orf78Q9NZ63 289 aaPredicted RBP13.87□□□□□ -0.19
RPGR-203ENST00000378505 AKNAQ7Z591 1439 aa13.87□□□□□ -0.19
RPGR-203ENST00000378505 SMG6Q86US8 1419 aaKnown RBP13.87□□□□□ -0.19
RPGR-203ENST00000378505 KIAA0586Q9BVV6 1533 aa13.86□□□□□ -0.19
RPGR-203ENST00000378505 SLC12A5Q9H2X9 1139 aa13.86□□□□□ -0.19
RPGR-203ENST00000378505 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
RPGR-203ENST00000378505 CHMP4CQ96CF2 233 aa13.85□□□□□ -0.19
RPGR-203ENST00000378505 INTS3Q68E01 1043 aaKnown RBP13.85□□□□□ -0.19
RPGR-203ENST00000378505 TSPYL4Q9UJ04 414 aa13.85□□□□□ -0.19
RPGR-203ENST00000378505 NFKBIBQ15653 356 aa13.84□□□□□ -0.19
RPGR-203ENST00000378505 ZKSCAN1P17029 563 aaPredicted RBP13.84□□□□□ -0.19
RPGR-203ENST00000378505 ANKRD30BQ9BXX2 1392 aa13.84□□□□□ -0.19
RPGR-203ENST00000378505 SNAPC4Q5SXM2 1469 aa13.84□□□□□ -0.19
RPGR-203ENST00000378505 ERBINQ96RT1 1412 aa13.84□□□□□ -0.19
RPGR-203ENST00000378505 ISY1Q9ULR0 285 aaKnown RBP13.83□□□□□ -0.19
RPGR-203ENST00000378505 SF3A1Q15459 793 aaKnown RBP13.83□□□□□ -0.2
RPGR-203ENST00000378505 NECTIN2Q92692 538 aa13.83□□□□□ -0.2
RPGR-203ENST00000378505 EXOSC9Q06265 439 aaKnown RBP13.83□□□□□ -0.2
RPGR-203ENST00000378505 ANO2Q9NQ90 1003 aa13.83□□□□□ -0.2
RPGR-203ENST00000378505 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.83□□□□□ -0.2
RPGR-203ENST00000378505 DDX58O95786 925 aaKnown RBP13.82□□□□□ -0.2
RPGR-203ENST00000378505 NUCB2P80303 420 aa13.82□□□□□ -0.2
RPGR-203ENST00000378505 CDK13Q14004 1512 aaKnown RBP13.82□□□□□ -0.2
RPGR-203ENST00000378505 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
RPGR-203ENST00000378505 HSP90AB4PQ58FF6 505 aa13.82□□□□□ -0.2
RPGR-203ENST00000378505 IFIT2P09913 472 aaKnown RBP13.82□□□□□ -0.2
RPGR-203ENST00000378505 PSME1Q06323 249 aa13.82□□□□□ -0.2
RPGR-203ENST00000378505 TTC5Q8N0Z6 440 aa13.82□□□□□ -0.2
RPGR-203ENST00000378505 FAM184AQ8NB25 1140 aa13.82□□□□□ -0.2
RPGR-203ENST00000378505 PCF11O94913 1555 aaKnown RBP13.81□□□□□ -0.2
RPGR-203ENST00000378505 H3BQV1 296 aa13.81□□□□□ -0.2
RPGR-203ENST00000378505 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
RPGR-203ENST00000378505 BACH2Q9BYV9 841 aa13.81□□□□□ -0.2
RPGR-203ENST00000378505 SLC52A1Q9NWF4 448 aa13.81□□□□□ -0.2
RPGR-203ENST00000378505 BCAR3O75815 825 aa13.81□□□□□ -0.2
RPGR-203ENST00000378505 FOXD4L6Q3SYB3 417 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms