RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 NEXMIFQ5QGS0 1516 aa22.62■■□□□ 1.21
CCDC107-204ENST00000378409 RPGRIP1LQ68CZ1 1315 aa22.59■■□□□ 1.21
CCDC107-204ENST00000378409 MYOM2P54296 1465 aa22.59■■□□□ 1.21
CCDC107-204ENST00000378409 UHRF1BP1Q6BDS2 1440 aa22.57■■□□□ 1.2
CCDC107-204ENST00000378409 PRAG1Q86YV5 1406 aa22.56■■□□□ 1.2
CCDC107-204ENST00000378409 NBPF8Q3BBV2 869 aa22.55■■□□□ 1.2
CCDC107-204ENST00000378409 STAC3Q96MF2 364 aa22.55■■□□□ 1.2
CCDC107-204ENST00000378409 TRPM1Q7Z4N2 1603 aa22.55■■□□□ 1.2
CCDC107-204ENST00000378409 RIMS2Q9UQ26 1411 aa22.54■■□□□ 1.2
CCDC107-204ENST00000378409 NUTM2DQ5VT03 806 aaPredicted RBP22.52■■□□□ 1.2
CCDC107-204ENST00000378409 ZFYVE9O95405 1425 aa22.51■■□□□ 1.19
CCDC107-204ENST00000378409 NRXN1Q9ULB1 1477 aa22.51■■□□□ 1.19
CCDC107-204ENST00000378409 KIAA1210Q9ULL0 1709 aa22.51■■□□□ 1.19
CCDC107-204ENST00000378409 TMEM2Q9UHN6 1383 aa22.5■■□□□ 1.19
CCDC107-204ENST00000378409 VGFO15240 615 aaPredicted RBP22.5■■□□□ 1.19
CCDC107-204ENST00000378409 THEMISQ8N1K5 641 aaPredicted RBP22.5■■□□□ 1.19
CCDC107-204ENST00000378409 ADGRF5Q8IZF2 1346 aa22.5■■□□□ 1.19
CCDC107-204ENST00000378409 RALGAPBQ86X10 1494 aa22.49■■□□□ 1.19
CCDC107-204ENST00000378409 SLIT1O75093 1534 aa22.49■■□□□ 1.19
CCDC107-204ENST00000378409 ARHGAP23Q9P227 1491 aa22.47■■□□□ 1.19
CCDC107-204ENST00000378409 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.47■■□□□ 1.19
CCDC107-204ENST00000378409 PIK3C2GO75747 1445 aa22.47■■□□□ 1.19
CCDC107-204ENST00000378409 HDGFP51858 240 aaKnown RBP22.46■■□□□ 1.19
CCDC107-204ENST00000378409 LAMC1P11047 1609 aa22.46■■□□□ 1.19
CCDC107-204ENST00000378409 IQGAP1P46940 1657 aa22.44■■□□□ 1.18
CCDC107-204ENST00000378409 POLR1AO95602 1720 aaPredicted RBP22.43■■□□□ 1.18
CCDC107-204ENST00000378409 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
CCDC107-204ENST00000378409 EID1Q9Y6B2 187 aa22.42■■□□□ 1.18
CCDC107-204ENST00000378409 ROCK2O75116 1388 aaKnown RBP22.41■■□□□ 1.18
CCDC107-204ENST00000378409 TXNDC2Q86VQ3 553 aa22.41■■□□□ 1.18
CCDC107-204ENST00000378409 NRXN3Q9Y4C0 1643 aa22.41■■□□□ 1.18
CCDC107-204ENST00000378409 SCAF11Q99590 1463 aaKnown RBP22.41■■□□□ 1.18
CCDC107-204ENST00000378409 LTKP29376 864 aa22.4■■□□□ 1.18
CCDC107-204ENST00000378409 SETBP1Q9Y6X0 1596 aa22.39■■□□□ 1.18
CCDC107-204ENST00000378409 NBPF1Q3BBV0 1214 aa22.39■■□□□ 1.17
CCDC107-204ENST00000378409 SETD1AO15047 1707 aaKnown RBP22.39■■□□□ 1.17
CCDC107-204ENST00000378409 CFAP70Q5T0N1 1121 aa22.38■■□□□ 1.17
CCDC107-204ENST00000378409 ALKQ9UM73 1620 aa22.38■■□□□ 1.17
CCDC107-204ENST00000378409 LMTK3Q96Q04 1460 aa22.37■■□□□ 1.17
CCDC107-204ENST00000378409 BCANQ96GW7 911 aa22.36■■□□□ 1.17
CCDC107-204ENST00000378409 C14orf93Q9H972 538 aaKnown RBP22.36■■□□□ 1.17
CCDC107-204ENST00000378409 PLEKHG1Q9ULL1 1385 aa22.36■■□□□ 1.17
CCDC107-204ENST00000378409 CARD11Q9BXL7 1154 aa22.35■■□□□ 1.17
CCDC107-204ENST00000378409 GPRASP1Q5JY77 1395 aa22.35■■□□□ 1.17
CCDC107-204ENST00000378409 ANKLE2Q86XL3 938 aa22.34■■□□□ 1.17
CCDC107-204ENST00000378409 ADGRB1O14514 1584 aa22.33■■□□□ 1.16
CCDC107-204ENST00000378409 ASXL1Q8IXJ9 1541 aa22.32■■□□□ 1.16
CCDC107-204ENST00000378409 FBXO41Q8TF61 875 aa22.31■■□□□ 1.16
CCDC107-204ENST00000378409 USP47Q96K76 1375 aa22.29■■□□□ 1.16
CCDC107-204ENST00000378409 HSPA2P54652 639 aa22.29■■□□□ 1.16
CCDC107-204ENST00000378409 EIF4G2P78344 907 aaKnown RBP eCLIP22.29■■□□□ 1.16
CCDC107-204ENST00000378409 ADAMTS13Q76LX8 1427 aa22.29■■□□□ 1.16
CCDC107-204ENST00000378409 DIP2AQ14689 1571 aa22.29■■□□□ 1.16
CCDC107-204ENST00000378409 TMEM132EQ6IEE7 984 aa22.28■■□□□ 1.16
CCDC107-204ENST00000378409 NCKAP5LQ9HCH0 1330 aa22.27■■□□□ 1.16
CCDC107-204ENST00000378409 HSPA5P11021 654 aaKnown RBP22.26■■□□□ 1.15
CCDC107-204ENST00000378409 ARHGEF28Q8N1W1 1705 aaKnown RBP22.26■■□□□ 1.15
CCDC107-204ENST00000378409 STRCQ7RTU9 1775 aa22.25■■□□□ 1.15
CCDC107-204ENST00000378409 NPHP4O75161 1426 aaPredicted RBP22.25■■□□□ 1.15
CCDC107-204ENST00000378409 SLC26A8Q96RN1 970 aa22.25■■□□□ 1.15
CCDC107-204ENST00000378409 MED14O60244 1454 aa22.25■■□□□ 1.15
CCDC107-204ENST00000378409 HIRIP3Q9BW71 556 aaPredicted RBP22.24■■□□□ 1.15
CCDC107-204ENST00000378409 METP08581 1390 aa22.23■■□□□ 1.15
CCDC107-204ENST00000378409 KNDC1Q76NI1 1749 aa22.23■■□□□ 1.15
CCDC107-204ENST00000378409 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
CCDC107-204ENST00000378409 EIF3AQ14152 1382 aaKnown RBP22.21■■□□□ 1.15
CCDC107-204ENST00000378409 STK26Q9P289 416 aa22.2■■□□□ 1.14
CCDC107-204ENST00000378409 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
CCDC107-204ENST00000378409 TBX22Q9Y458 520 aa22.2■■□□□ 1.14
CCDC107-204ENST00000378409 QRICH2Q9H0J4 1663 aa22.2■■□□□ 1.14
CCDC107-204ENST00000378409 ZNF316A6NFI3 1004 aaPredicted RBP22.19■■□□□ 1.14
CCDC107-204ENST00000378409 CHD2O14647 1828 aaKnown RBP22.18■■□□□ 1.14
CCDC107-204ENST00000378409 LRPPRCP42704 1394 aaKnown RBP22.18■■□□□ 1.14
CCDC107-204ENST00000378409 ST20-MTHFSA0A0A6YYL1 179 aa22.18■■□□□ 1.14
CCDC107-204ENST00000378409 DLC1Q96QB1 1528 aa22.16■■□□□ 1.14
CCDC107-204ENST00000378409 XRN1Q8IZH2 1706 aaKnown RBP22.15■■□□□ 1.14
CCDC107-204ENST00000378409 CPS1P31327 1500 aa22.15■■□□□ 1.14
CCDC107-204ENST00000378409 PTPRUQ92729 1446 aa22.14■■□□□ 1.13
CCDC107-204ENST00000378409 ABCC11Q96J66 1382 aa22.13■■□□□ 1.13
CCDC107-204ENST00000378409 PIK3R4Q99570 1358 aa22.12■■□□□ 1.13
CCDC107-204ENST00000378409 TECPR2O15040 1411 aa22.12■■□□□ 1.13
CCDC107-204ENST00000378409 CENPJQ9HC77 1338 aaPredicted RBP22.11■■□□□ 1.13
CCDC107-204ENST00000378409 AMOTL2Q9Y2J4 779 aa22.09■■□□□ 1.13
CCDC107-204ENST00000378409 PRAM1Q96QH2 718 aa22.08■■□□□ 1.13
CCDC107-204ENST00000378409 POGKQ9P215 609 aa22.08■■□□□ 1.13
CCDC107-204ENST00000378409 NWD1Q149M9 1564 aa22.08■■□□□ 1.12
CCDC107-204ENST00000378409 TESK2Q96S53 571 aa22.07■■□□□ 1.12
CCDC107-204ENST00000378409 FAM135BQ49AJ0 1406 aa22.06■■□□□ 1.12
CCDC107-204ENST00000378409 SAFB2Q14151 953 aaKnown RBP eCLIP22.06■■□□□ 1.12
CCDC107-204ENST00000378409 ROBO2Q9HCK4 1378 aa22.06■■□□□ 1.12
CCDC107-204ENST00000378409 PTCH1Q13635 1447 aa22.06■■□□□ 1.12
CCDC107-204ENST00000378409 PLEKHH1Q9ULM0 1364 aa22.05■■□□□ 1.12
CCDC107-204ENST00000378409 STRCP1A6NGW2 1772 aa22.04■■□□□ 1.12
CCDC107-204ENST00000378409 SBNO2Q9Y2G9 1366 aa22.04■■□□□ 1.12
CCDC107-204ENST00000378409 WAPLQ7Z5K2 1190 aa22.04■■□□□ 1.12
CCDC107-204ENST00000378409 C11orf95C9JLR9 678 aaPredicted RBP22.03■■□□□ 1.12
CCDC107-204ENST00000378409 SIRT1Q96EB6 747 aa22.03■■□□□ 1.12
CCDC107-204ENST00000378409 DISP3Q9P2K9 1392 aa22.02■■□□□ 1.12
CCDC107-204ENST00000378409 KCNA6P17658 529 aa22.02■■□□□ 1.12
CCDC107-204ENST00000378409 TMF1P82094 1093 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms