RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 LTKP29376 864 aa19.44■□□□□ 0.7
CKAP2-202ENST00000378034 NPHP4O75161 1426 aaPredicted RBP19.44■□□□□ 0.7
CKAP2-202ENST00000378034 RIMS2Q9UQ26 1411 aa19.44■□□□□ 0.7
CKAP2-202ENST00000378034 IQGAP1P46940 1657 aa19.42■□□□□ 0.7
CKAP2-202ENST00000378034 PCGF6Q9BYE7 350 aa19.41■□□□□ 0.7
CKAP2-202ENST00000378034 ZNF326Q5BKZ1 582 aaKnown RBP19.41■□□□□ 0.7
CKAP2-202ENST00000378034 RPGRIP1LQ68CZ1 1315 aa19.4■□□□□ 0.7
CKAP2-202ENST00000378034 SPATA31E1Q6ZUB1 1445 aa19.38■□□□□ 0.69
CKAP2-202ENST00000378034 PPP1R15AO75807 674 aaPredicted RBP19.38■□□□□ 0.69
CKAP2-202ENST00000378034 PLEKHG1Q9ULL1 1385 aa19.37■□□□□ 0.69
CKAP2-202ENST00000378034 NEXMIFQ5QGS0 1516 aa19.37■□□□□ 0.69
CKAP2-202ENST00000378034 DHX57Q6P158 1386 aaKnown RBP19.36■□□□□ 0.69
CKAP2-202ENST00000378034 PPLO60437 1756 aa19.33■□□□□ 0.69
CKAP2-202ENST00000378034 VGFO15240 615 aaPredicted RBP19.33■□□□□ 0.68
CKAP2-202ENST00000378034 RGL3Q3MIN7 710 aa19.31■□□□□ 0.68
CKAP2-202ENST00000378034 NUTM2DQ5VT03 806 aaPredicted RBP19.31■□□□□ 0.68
CKAP2-202ENST00000378034 IFT172Q9UG01 1749 aa19.31■□□□□ 0.68
CKAP2-202ENST00000378034 BCANQ96GW7 911 aa19.3■□□□□ 0.68
CKAP2-202ENST00000378034 DIP2AQ14689 1571 aa19.3■□□□□ 0.68
CKAP2-202ENST00000378034 SETBP1Q9Y6X0 1596 aa19.29■□□□□ 0.68
CKAP2-202ENST00000378034 TBX22Q9Y458 520 aa19.28■□□□□ 0.68
CKAP2-202ENST00000378034 SLC26A8Q96RN1 970 aa19.26■□□□□ 0.67
CKAP2-202ENST00000378034 ZNF335Q9H4Z2 1342 aaPredicted RBP19.26■□□□□ 0.67
CKAP2-202ENST00000378034 ADAMTS13Q76LX8 1427 aa19.26■□□□□ 0.67
CKAP2-202ENST00000378034 LTBP4Q8N2S1 1624 aa19.26■□□□□ 0.67
CKAP2-202ENST00000378034 STAC3Q96MF2 364 aa19.26■□□□□ 0.67
CKAP2-202ENST00000378034 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
CKAP2-202ENST00000378034 CPS1P31327 1500 aa19.24■□□□□ 0.67
CKAP2-202ENST00000378034 MYOM2P54296 1465 aa19.24■□□□□ 0.67
CKAP2-202ENST00000378034 PIK3R4Q99570 1358 aa19.24■□□□□ 0.67
CKAP2-202ENST00000378034 KCNA6P17658 529 aa19.21■□□□□ 0.67
CKAP2-202ENST00000378034 ADGRF5Q8IZF2 1346 aa19.21■□□□□ 0.67
CKAP2-202ENST00000378034 NRXN1Q9ULB1 1477 aa19.21■□□□□ 0.67
CKAP2-202ENST00000378034 CHD2O14647 1828 aaKnown RBP19.2■□□□□ 0.66
CKAP2-202ENST00000378034 NWD1Q149M9 1564 aa19.2■□□□□ 0.66
CKAP2-202ENST00000378034 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
CKAP2-202ENST00000378034 STRCP1A6NGW2 1772 aa19.2■□□□□ 0.66
CKAP2-202ENST00000378034 SIN3AQ96ST3 1273 aa19.19■□□□□ 0.66
CKAP2-202ENST00000378034 PIK3C2GO75747 1445 aa19.19■□□□□ 0.66
CKAP2-202ENST00000378034 ALKQ9UM73 1620 aa19.19■□□□□ 0.66
CKAP2-202ENST00000378034 CERKQ8TCT0 537 aa19.19■□□□□ 0.66
CKAP2-202ENST00000378034 DCAF11Q8TEB1 546 aa19.19■□□□□ 0.66
CKAP2-202ENST00000378034 IQSEC2Q5JU85 1478 aa19.19■□□□□ 0.66
CKAP2-202ENST00000378034 CLSPNQ9HAW4 1339 aa19.18■□□□□ 0.66
CKAP2-202ENST00000378034 SETD1AO15047 1707 aaKnown RBP19.17■□□□□ 0.66
CKAP2-202ENST00000378034 NKTRP30414 1462 aaKnown RBP19.17■□□□□ 0.66
CKAP2-202ENST00000378034 NEUROD1Q13562 356 aa19.16■□□□□ 0.66
CKAP2-202ENST00000378034 LAMC1P11047 1609 aa19.15■□□□□ 0.66
CKAP2-202ENST00000378034 METP08581 1390 aa19.14■□□□□ 0.66
CKAP2-202ENST00000378034 KDM2AQ9Y2K7 1162 aa19.14■□□□□ 0.65
CKAP2-202ENST00000378034 LRRC7Q96NW7 1537 aa19.13■□□□□ 0.65
CKAP2-202ENST00000378034 C14orf93Q9H972 538 aaKnown RBP19.13■□□□□ 0.65
CKAP2-202ENST00000378034 AMOTL2Q9Y2J4 779 aa19.12■□□□□ 0.65
CKAP2-202ENST00000378034 XRN1Q8IZH2 1706 aaKnown RBP19.12■□□□□ 0.65
CKAP2-202ENST00000378034 PTPRUQ92729 1446 aa19.12■□□□□ 0.65
CKAP2-202ENST00000378034 L3MBTL2Q969R5 705 aa19.11■□□□□ 0.65
CKAP2-202ENST00000378034 PROSER2Q86WR7 435 aaPredicted RBP19.1■□□□□ 0.65
CKAP2-202ENST00000378034 PRAG1Q86YV5 1406 aa19.09■□□□□ 0.65
CKAP2-202ENST00000378034 NCOA3Q9Y6Q9 1424 aa19.08■□□□□ 0.65
CKAP2-202ENST00000378034 TONSLQ96HA7 1378 aa19.08■□□□□ 0.64
CKAP2-202ENST00000378034 CFAP70Q5T0N1 1121 aa19.08■□□□□ 0.64
CKAP2-202ENST00000378034 CCER1Q8TC90 406 aaPredicted RBP19.07■□□□□ 0.64
CKAP2-202ENST00000378034 XIRP1Q702N8 1843 aaKnown RBP19.07■□□□□ 0.64
CKAP2-202ENST00000378034 KIAA1210Q9ULL0 1709 aa19.07■□□□□ 0.64
CKAP2-202ENST00000378034 TMEM94Q12767 1356 aa19.06■□□□□ 0.64
CKAP2-202ENST00000378034 ASXL1Q8IXJ9 1541 aa19.06■□□□□ 0.64
CKAP2-202ENST00000378034 PTCH1Q13635 1447 aa19.06■□□□□ 0.64
CKAP2-202ENST00000378034 LRPPRCP42704 1394 aaKnown RBP19.05■□□□□ 0.64
CKAP2-202ENST00000378034 KNDC1Q76NI1 1749 aa19.04■□□□□ 0.64
CKAP2-202ENST00000378034 TECPR2O15040 1411 aa19.04■□□□□ 0.64
CKAP2-202ENST00000378034 ABCC11Q96J66 1382 aa19.04■□□□□ 0.64
CKAP2-202ENST00000378034 YTHDC2Q9H6S0 1430 aaKnown RBP19.03■□□□□ 0.64
CKAP2-202ENST00000378034 TMEM132EQ6IEE7 984 aa19.03■□□□□ 0.64
CKAP2-202ENST00000378034 TIMELESSQ9UNS1 1208 aa19.03■□□□□ 0.64
CKAP2-202ENST00000378034 ADGRB1O14514 1584 aa19.03■□□□□ 0.64
CKAP2-202ENST00000378034 SIRT1Q96EB6 747 aa19.01■□□□□ 0.63
CKAP2-202ENST00000378034 FBXO41Q8TF61 875 aa19.01■□□□□ 0.63
CKAP2-202ENST00000378034 ROBO2Q9HCK4 1378 aa18.99■□□□□ 0.63
CKAP2-202ENST00000378034 MSH6P52701 1360 aa18.99■□□□□ 0.63
CKAP2-202ENST00000378034 TOM1O60784 492 aa18.99■□□□□ 0.63
CKAP2-202ENST00000378034 STK26Q9P289 416 aa18.99■□□□□ 0.63
CKAP2-202ENST00000378034 FAM135BQ49AJ0 1406 aa18.98■□□□□ 0.63
CKAP2-202ENST00000378034 RBM33Q96EV2 1170 aaKnown RBP18.98■□□□□ 0.63
CKAP2-202ENST00000378034 DLC1Q96QB1 1528 aa18.98■□□□□ 0.63
CKAP2-202ENST00000378034 C19orf44Q9H6X5 657 aa18.97■□□□□ 0.63
CKAP2-202ENST00000378034 TRPM1Q7Z4N2 1603 aa18.97■□□□□ 0.63
CKAP2-202ENST00000378034 UBAP1LF5GYI3 381 aa18.97■□□□□ 0.63
CKAP2-202ENST00000378034 C14orf37Q86TY3 774 aa18.97■□□□□ 0.63
CKAP2-202ENST00000378034 DCCP43146 1447 aa18.95■□□□□ 0.62
CKAP2-202ENST00000378034 ADGRL3Q9HAR2 1447 aa18.95■□□□□ 0.62
CKAP2-202ENST00000378034 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
CKAP2-202ENST00000378034 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
CKAP2-202ENST00000378034 NBPF8Q3BBV2 869 aa18.93■□□□□ 0.62
CKAP2-202ENST00000378034 NALCNQ8IZF0 1738 aa18.92■□□□□ 0.62
CKAP2-202ENST00000378034 CADPS2Q86UW7 1296 aa18.92■□□□□ 0.62
CKAP2-202ENST00000378034 TRAK1Q9UPV9 953 aa18.92■□□□□ 0.62
CKAP2-202ENST00000378034 ATF3P18847 181 aa18.91■□□□□ 0.62
CKAP2-202ENST00000378034 WAPLQ7Z5K2 1190 aa18.91■□□□□ 0.62
CKAP2-202ENST00000378034 ROCK2O75116 1388 aaKnown RBP18.9■□□□□ 0.62
CKAP2-202ENST00000378034 ARHGEF28Q8N1W1 1705 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms