RNA–Protein interactions for RNA: ENST00000376809.9

HLA-A-203, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,611 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-203ENST00000376809 RPGRIP1LQ68CZ1 1315 aa25.62■■□□□ 1.69
HLA-A-203ENST00000376809 NUTM2DQ5VT03 806 aaPredicted RBP25.61■■□□□ 1.69
HLA-A-203ENST00000376809 RIMS2Q9UQ26 1411 aa25.6■■□□□ 1.69
HLA-A-203ENST00000376809 PPP1R15AO75807 674 aaPredicted RBP25.6■■□□□ 1.69
HLA-A-203ENST00000376809 THEMISQ8N1K5 641 aaPredicted RBP25.6■■□□□ 1.69
HLA-A-203ENST00000376809 TMEM2Q9UHN6 1383 aa25.6■■□□□ 1.69
HLA-A-203ENST00000376809 MYOM2P54296 1465 aa25.58■■□□□ 1.68
HLA-A-203ENST00000376809 ZFYVE9O95405 1425 aa25.57■■□□□ 1.68
HLA-A-203ENST00000376809 SLIT1O75093 1534 aa25.56■■□□□ 1.68
HLA-A-203ENST00000376809 LMTK3Q96Q04 1460 aa25.56■■□□□ 1.68
HLA-A-203ENST00000376809 ADGRF5Q8IZF2 1346 aa25.55■■□□□ 1.68
HLA-A-203ENST00000376809 ARHGAP23Q9P227 1491 aa25.55■■□□□ 1.68
HLA-A-203ENST00000376809 PRAG1Q86YV5 1406 aa25.53■■□□□ 1.68
HLA-A-203ENST00000376809 VGFO15240 615 aaPredicted RBP25.53■■□□□ 1.68
HLA-A-203ENST00000376809 NBPF8Q3BBV2 869 aa25.53■■□□□ 1.68
HLA-A-203ENST00000376809 STAC3Q96MF2 364 aa25.53■■□□□ 1.68
HLA-A-203ENST00000376809 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.52■■□□□ 1.68
HLA-A-203ENST00000376809 SENP3Q9H4L4 574 aaPredicted RBP25.52■■□□□ 1.68
HLA-A-203ENST00000376809 HDGFP51858 240 aaKnown RBP25.51■■□□□ 1.67
HLA-A-203ENST00000376809 NRXN1Q9ULB1 1477 aa25.5■■□□□ 1.67
HLA-A-203ENST00000376809 TXNDC2Q86VQ3 553 aa25.5■■□□□ 1.67
HLA-A-203ENST00000376809 EID1Q9Y6B2 187 aa25.5■■□□□ 1.67
HLA-A-203ENST00000376809 LTKP29376 864 aa25.49■■□□□ 1.67
HLA-A-203ENST00000376809 PIK3C2GO75747 1445 aa25.48■■□□□ 1.67
HLA-A-203ENST00000376809 TRPM1Q7Z4N2 1603 aa25.47■■□□□ 1.67
HLA-A-203ENST00000376809 SCAF11Q99590 1463 aaKnown RBP25.47■■□□□ 1.67
HLA-A-203ENST00000376809 POLR1AO95602 1720 aaPredicted RBP25.47■■□□□ 1.67
HLA-A-203ENST00000376809 HSPA2P54652 639 aa25.47■■□□□ 1.67
HLA-A-203ENST00000376809 IQGAP1P46940 1657 aa25.44■■□□□ 1.66
HLA-A-203ENST00000376809 ANKLE2Q86XL3 938 aa25.44■■□□□ 1.66
HLA-A-203ENST00000376809 KIAA1210Q9ULL0 1709 aa25.43■■□□□ 1.66
HLA-A-203ENST00000376809 NRXN3Q9Y4C0 1643 aa25.43■■□□□ 1.66
HLA-A-203ENST00000376809 RALGAPBQ86X10 1494 aa25.42■■□□□ 1.66
HLA-A-203ENST00000376809 CFAP70Q5T0N1 1121 aa25.41■■□□□ 1.66
HLA-A-203ENST00000376809 BCANQ96GW7 911 aa25.41■■□□□ 1.66
HLA-A-203ENST00000376809 PLEKHG1Q9ULL1 1385 aa25.41■■□□□ 1.66
HLA-A-203ENST00000376809 LAMC1P11047 1609 aa25.41■■□□□ 1.66
HLA-A-203ENST00000376809 SETBP1Q9Y6X0 1596 aa25.4■■□□□ 1.66
HLA-A-203ENST00000376809 ALKQ9UM73 1620 aa25.39■■□□□ 1.65
HLA-A-203ENST00000376809 NCKAP5LQ9HCH0 1330 aa25.38■■□□□ 1.65
HLA-A-203ENST00000376809 NBPF1Q3BBV0 1214 aa25.37■■□□□ 1.65
HLA-A-203ENST00000376809 C14orf93Q9H972 538 aaKnown RBP25.37■■□□□ 1.65
HLA-A-203ENST00000376809 SETD1AO15047 1707 aaKnown RBP25.37■■□□□ 1.65
HLA-A-203ENST00000376809 ROCK2O75116 1388 aaKnown RBP25.37■■□□□ 1.65
HLA-A-203ENST00000376809 STRCQ7RTU9 1775 aa25.35■■□□□ 1.65
HLA-A-203ENST00000376809 NPHP4O75161 1426 aaPredicted RBP25.34■■□□□ 1.65
HLA-A-203ENST00000376809 ADAMTS13Q76LX8 1427 aa25.34■■□□□ 1.65
HLA-A-203ENST00000376809 MED14O60244 1454 aa25.33■■□□□ 1.65
HLA-A-203ENST00000376809 ASXL1Q8IXJ9 1541 aa25.32■■□□□ 1.64
HLA-A-203ENST00000376809 SLC26A8Q96RN1 970 aa25.32■■□□□ 1.64
HLA-A-203ENST00000376809 TMEM132EQ6IEE7 984 aa25.31■■□□□ 1.64
HLA-A-203ENST00000376809 CARD11Q9BXL7 1154 aa25.31■■□□□ 1.64
HLA-A-203ENST00000376809 ADGRB1O14514 1584 aa25.31■■□□□ 1.64
HLA-A-203ENST00000376809 GPRASP1Q5JY77 1395 aa25.3■■□□□ 1.64
HLA-A-203ENST00000376809 DMRT2Q9Y5R5 561 aa25.3■■□□□ 1.64
HLA-A-203ENST00000376809 DIP2AQ14689 1571 aa25.29■■□□□ 1.64
HLA-A-203ENST00000376809 METP08581 1390 aa25.27■■□□□ 1.64
HLA-A-203ENST00000376809 TBX22Q9Y458 520 aa25.25■■□□□ 1.63
HLA-A-203ENST00000376809 STK26Q9P289 416 aa25.22■■□□□ 1.63
HLA-A-203ENST00000376809 USP47Q96K76 1375 aa25.22■■□□□ 1.63
HLA-A-203ENST00000376809 YTHDC2Q9H6S0 1430 aaKnown RBP25.21■■□□□ 1.63
HLA-A-203ENST00000376809 TRAK1Q9UPV9 953 aa25.19■■□□□ 1.62
HLA-A-203ENST00000376809 CHD2O14647 1828 aaKnown RBP25.18■■□□□ 1.62
HLA-A-203ENST00000376809 ARHGEF28Q8N1W1 1705 aaKnown RBP25.18■■□□□ 1.62
HLA-A-203ENST00000376809 EIF4G2P78344 907 aaKnown RBP eCLIP25.18■■□□□ 1.62
HLA-A-203ENST00000376809 PTPRUQ92729 1446 aa25.17■■□□□ 1.62
HLA-A-203ENST00000376809 LRPPRCP42704 1394 aaKnown RBP25.17■■□□□ 1.62
HLA-A-203ENST00000376809 KNDC1Q76NI1 1749 aa25.17■■□□□ 1.62
HLA-A-203ENST00000376809 HSPA5P11021 654 aaKnown RBP25.15■■□□□ 1.62
HLA-A-203ENST00000376809 HIRIP3Q9BW71 556 aaPredicted RBP25.15■■□□□ 1.62
HLA-A-203ENST00000376809 PIK3R4Q99570 1358 aa25.15■■□□□ 1.62
HLA-A-203ENST00000376809 XRN1Q8IZH2 1706 aaKnown RBP25.14■■□□□ 1.62
HLA-A-203ENST00000376809 EIF3AQ14152 1382 aaKnown RBP25.13■■□□□ 1.61
HLA-A-203ENST00000376809 AMOTL2Q9Y2J4 779 aa25.12■■□□□ 1.61
HLA-A-203ENST00000376809 ABCC11Q96J66 1382 aa25.12■■□□□ 1.61
HLA-A-203ENST00000376809 ST20-MTHFSA0A0A6YYL1 179 aa25.11■■□□□ 1.61
HLA-A-203ENST00000376809 CPS1P31327 1500 aa25.1■■□□□ 1.61
HLA-A-203ENST00000376809 DLC1Q96QB1 1528 aa25.1■■□□□ 1.61
HLA-A-203ENST00000376809 TECPR2O15040 1411 aa25.1■■□□□ 1.61
HLA-A-203ENST00000376809 QRICH2Q9H0J4 1663 aa25.09■■□□□ 1.61
HLA-A-203ENST00000376809 NWD1Q149M9 1564 aa25.08■■□□□ 1.61
HLA-A-203ENST00000376809 KCNA6P17658 529 aa25.08■■□□□ 1.6
HLA-A-203ENST00000376809 STRCP1A6NGW2 1772 aa25.07■■□□□ 1.6
HLA-A-203ENST00000376809 PRAM1Q96QH2 718 aa25.07■■□□□ 1.6
HLA-A-203ENST00000376809 CENPJQ9HC77 1338 aaPredicted RBP25.07■■□□□ 1.6
HLA-A-203ENST00000376809 ROBO2Q9HCK4 1378 aa25.06■■□□□ 1.6
HLA-A-203ENST00000376809 SAFB2Q14151 953 aaKnown RBP eCLIP25.06■■□□□ 1.6
HLA-A-203ENST00000376809 POGKQ9P215 609 aa25.05■■□□□ 1.6
HLA-A-203ENST00000376809 PTCH1Q13635 1447 aa25.05■■□□□ 1.6
HLA-A-203ENST00000376809 WAPLQ7Z5K2 1190 aa25.04■■□□□ 1.6
HLA-A-203ENST00000376809 PLEKHH1Q9ULM0 1364 aa25.04■■□□□ 1.6
HLA-A-203ENST00000376809 FAM135BQ49AJ0 1406 aa25.03■■□□□ 1.6
HLA-A-203ENST00000376809 SIRT1Q96EB6 747 aa25.01■■□□□ 1.59
HLA-A-203ENST00000376809 ZNF335Q9H4Z2 1342 aaPredicted RBP25■■□□□ 1.59
HLA-A-203ENST00000376809 TESK2Q96S53 571 aa25■■□□□ 1.59
HLA-A-203ENST00000376809 NKTRP30414 1462 aaKnown RBP24.99■■□□□ 1.59
HLA-A-203ENST00000376809 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.97■■□□□ 1.59
HLA-A-203ENST00000376809 MINK1Q8N4C8 1332 aaPredicted RBP24.97■■□□□ 1.59
HLA-A-203ENST00000376809 ZNF316A6NFI3 1004 aaPredicted RBP24.97■■□□□ 1.59
HLA-A-203ENST00000376809 SBNO2Q9Y2G9 1366 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms