RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 KIF1BO60333 1816 aa48.85■■■■■ 5.41
PPP1CA-203ENST00000376745 HDGFP51858 240 aaKnown RBP48.81■■■■■ 5.4
PPP1CA-203ENST00000376745 IQGAP1P46940 1657 aa48.8■■■■■ 5.4
PPP1CA-203ENST00000376745 ABCF1Q8NE71 845 aaKnown RBP eCLIP48.78■■■■■ 5.4
PPP1CA-203ENST00000376745 ZNF326Q5BKZ1 582 aaKnown RBP48.74■■■■■ 5.39
PPP1CA-203ENST00000376745 SPATA31E1Q6ZUB1 1445 aa48.72■■■■■ 5.39
PPP1CA-203ENST00000376745 PLEKHG1Q9ULL1 1385 aa48.69■■■■■ 5.38
PPP1CA-203ENST00000376745 NUTM2DQ5VT03 806 aaPredicted RBP48.68■■■■■ 5.38
PPP1CA-203ENST00000376745 PPP1R15AO75807 674 aaPredicted RBP48.67■■■■■ 5.38
PPP1CA-203ENST00000376745 PCGF6Q9BYE7 350 aa48.67■■■■■ 5.38
PPP1CA-203ENST00000376745 NEXMIFQ5QGS0 1516 aa48.67■■■■■ 5.38
PPP1CA-203ENST00000376745 RPGRIP1LQ68CZ1 1315 aa48.65■■■■■ 5.38
PPP1CA-203ENST00000376745 ZNF335Q9H4Z2 1342 aaPredicted RBP48.61■■■■■ 5.37
PPP1CA-203ENST00000376745 DHX57Q6P158 1386 aaKnown RBP48.6■■■■■ 5.37
PPP1CA-203ENST00000376745 RGL3Q3MIN7 710 aa48.57■■■■■ 5.37
PPP1CA-203ENST00000376745 LTBP4Q8N2S1 1624 aa48.57■■■■■ 5.37
PPP1CA-203ENST00000376745 SLC26A8Q96RN1 970 aa48.54■■■■■ 5.36
PPP1CA-203ENST00000376745 BCANQ96GW7 911 aa48.52■■■■■ 5.36
PPP1CA-203ENST00000376745 VGFO15240 615 aaPredicted RBP48.51■■■■■ 5.36
PPP1CA-203ENST00000376745 PPLO60437 1756 aa48.51■■■■■ 5.36
PPP1CA-203ENST00000376745 ADAMTS13Q76LX8 1427 aa48.5■■■■■ 5.35
PPP1CA-203ENST00000376745 SENP3Q9H4L4 574 aaPredicted RBP48.49■■■■■ 5.35
PPP1CA-203ENST00000376745 TBX22Q9Y458 520 aa48.47■■■■■ 5.35
PPP1CA-203ENST00000376745 SETBP1Q9Y6X0 1596 aa48.45■■■■■ 5.35
PPP1CA-203ENST00000376745 NRXN3Q9Y4C0 1643 aa48.43■■■■■ 5.34
PPP1CA-203ENST00000376745 IFT172Q9UG01 1749 aa48.42■■■■■ 5.34
PPP1CA-203ENST00000376745 DIP2AQ14689 1571 aa48.4■■■■■ 5.34
PPP1CA-203ENST00000376745 CERKQ8TCT0 537 aa48.37■■■■■ 5.33
PPP1CA-203ENST00000376745 STRCP1A6NGW2 1772 aa48.36■■■■■ 5.33
PPP1CA-203ENST00000376745 CPS1P31327 1500 aa48.35■■■■■ 5.33
PPP1CA-203ENST00000376745 ADGRF5Q8IZF2 1346 aa48.34■■■■■ 5.33
PPP1CA-203ENST00000376745 KCNA6P17658 529 aa48.32■■■■■ 5.33
PPP1CA-203ENST00000376745 PIK3R4Q99570 1358 aa48.29■■■■■ 5.32
PPP1CA-203ENST00000376745 MYOM2P54296 1465 aa48.28■■■■■ 5.32
PPP1CA-203ENST00000376745 SIN3AQ96ST3 1273 aa48.26■■■■■ 5.32
PPP1CA-203ENST00000376745 NWD1Q149M9 1564 aa48.25■■■■■ 5.31
PPP1CA-203ENST00000376745 NRXN1Q9ULB1 1477 aa48.24■■■■■ 5.31
PPP1CA-203ENST00000376745 CHD2O14647 1828 aaKnown RBP48.23■■■■■ 5.31
PPP1CA-203ENST00000376745 PIK3C2GO75747 1445 aa48.22■■■■■ 5.31
PPP1CA-203ENST00000376745 METP08581 1390 aa48.21■■■■■ 5.31
PPP1CA-203ENST00000376745 ALKQ9UM73 1620 aa48.21■■■■■ 5.31
PPP1CA-203ENST00000376745 DCAF11Q8TEB1 546 aa48.2■■■■■ 5.31
PPP1CA-203ENST00000376745 STAC3Q96MF2 364 aa48.2■■■■■ 5.31
PPP1CA-203ENST00000376745 IQSEC2Q5JU85 1478 aa48.19■■■■■ 5.31
PPP1CA-203ENST00000376745 LRRC7Q96NW7 1537 aa48.19■■■■■ 5.3
PPP1CA-203ENST00000376745 SETD1AO15047 1707 aaKnown RBP48.18■■■■■ 5.3
PPP1CA-203ENST00000376745 PTPRUQ92729 1446 aa48.17■■■■■ 5.3
PPP1CA-203ENST00000376745 NKTRP30414 1462 aaKnown RBP48.15■■■■■ 5.3
PPP1CA-203ENST00000376745 NEUROD1Q13562 356 aa48.11■■■■■ 5.29
PPP1CA-203ENST00000376745 KDM2AQ9Y2K7 1162 aa48.11■■■■■ 5.29
PPP1CA-203ENST00000376745 AMOTL2Q9Y2J4 779 aa48.1■■■■■ 5.29
PPP1CA-203ENST00000376745 C14orf93Q9H972 538 aaKnown RBP48.07■■■■■ 5.29
PPP1CA-203ENST00000376745 XRN1Q8IZH2 1706 aaKnown RBP48.05■■■■■ 5.28
PPP1CA-203ENST00000376745 PROSER2Q86WR7 435 aaPredicted RBP48.04■■■■■ 5.28
PPP1CA-203ENST00000376745 L3MBTL2Q969R5 705 aa48.02■■■■■ 5.28
PPP1CA-203ENST00000376745 TMEM94Q12767 1356 aa48.01■■■■■ 5.28
PPP1CA-203ENST00000376745 CFAP70Q5T0N1 1121 aa47.99■■■■■ 5.27
PPP1CA-203ENST00000376745 XIRP1Q702N8 1843 aaKnown RBP47.99■■■■■ 5.27
PPP1CA-203ENST00000376745 ASXL1Q8IXJ9 1541 aa47.96■■■■■ 5.27
PPP1CA-203ENST00000376745 LAMC1P11047 1609 aa47.96■■■■■ 5.27
PPP1CA-203ENST00000376745 PRAG1Q86YV5 1406 aa47.94■■■■■ 5.27
PPP1CA-203ENST00000376745 RBM33Q96EV2 1170 aaKnown RBP47.94■■■■■ 5.26
PPP1CA-203ENST00000376745 FBXO41Q8TF61 875 aa47.92■■■■■ 5.26
PPP1CA-203ENST00000376745 CLSPNQ9HAW4 1339 aa47.92■■■■■ 5.26
PPP1CA-203ENST00000376745 TMEM132EQ6IEE7 984 aa47.91■■■■■ 5.26
PPP1CA-203ENST00000376745 NCOA3Q9Y6Q9 1424 aa47.9■■■■■ 5.26
PPP1CA-203ENST00000376745 LRPPRCP42704 1394 aaKnown RBP47.87■■■■■ 5.25
PPP1CA-203ENST00000376745 PTCH1Q13635 1447 aa47.87■■■■■ 5.25
PPP1CA-203ENST00000376745 ROBO2Q9HCK4 1378 aa47.84■■■■■ 5.25
PPP1CA-203ENST00000376745 ADGRB1O14514 1584 aa47.83■■■■■ 5.25
PPP1CA-203ENST00000376745 TECPR2O15040 1411 aa47.83■■■■■ 5.25
PPP1CA-203ENST00000376745 YTHDC2Q9H6S0 1430 aaKnown RBP47.83■■■■■ 5.25
PPP1CA-203ENST00000376745 ABCC11Q96J66 1382 aa47.83■■■■■ 5.25
PPP1CA-203ENST00000376745 TONSLQ96HA7 1378 aa47.8■■■■■ 5.24
PPP1CA-203ENST00000376745 UBAP1LF5GYI3 381 aa47.79■■■■■ 5.24
PPP1CA-203ENST00000376745 STK26Q9P289 416 aa47.78■■■■■ 5.24
PPP1CA-203ENST00000376745 CCER1Q8TC90 406 aaPredicted RBP47.76■■■■■ 5.24
PPP1CA-203ENST00000376745 TOM1O60784 492 aa47.75■■■■■ 5.23
PPP1CA-203ENST00000376745 KNDC1Q76NI1 1749 aa47.73■■■■■ 5.23
PPP1CA-203ENST00000376745 KIAA1210Q9ULL0 1709 aa47.73■■■■■ 5.23
PPP1CA-203ENST00000376745 MSH6P52701 1360 aa47.73■■■■■ 5.23
PPP1CA-203ENST00000376745 C19orf44Q9H6X5 657 aa47.71■■■■■ 5.23
PPP1CA-203ENST00000376745 ILDR1Q86SU0 546 aaPredicted RBP47.69■■■■■ 5.22
PPP1CA-203ENST00000376745 SIRT1Q96EB6 747 aa47.69■■■■■ 5.22
PPP1CA-203ENST00000376745 C14orf37Q86TY3 774 aa47.68■■■■■ 5.22
PPP1CA-203ENST00000376745 FAM135BQ49AJ0 1406 aa47.64■■■■■ 5.22
PPP1CA-203ENST00000376745 ADGRL3Q9HAR2 1447 aa47.64■■■■■ 5.22
PPP1CA-203ENST00000376745 NBPF1Q3BBV0 1214 aa47.64■■■■■ 5.22
PPP1CA-203ENST00000376745 WAPLQ7Z5K2 1190 aa47.62■■■■■ 5.21
PPP1CA-203ENST00000376745 SIPA1L2Q9P2F8 1722 aaPredicted RBP47.62■■■■■ 5.21
PPP1CA-203ENST00000376745 NBPF8Q3BBV2 869 aa47.61■■■■■ 5.21
PPP1CA-203ENST00000376745 DLC1Q96QB1 1528 aa47.61■■■■■ 5.21
PPP1CA-203ENST00000376745 DCCP43146 1447 aa47.59■■■■■ 5.21
PPP1CA-203ENST00000376745 PLEKHH1Q9ULM0 1364 aa47.59■■■■■ 5.21
PPP1CA-203ENST00000376745 NALCNQ8IZF0 1738 aa47.58■■■■■ 5.21
PPP1CA-203ENST00000376745 TIMELESSQ9UNS1 1208 aa47.58■■■■■ 5.21
PPP1CA-203ENST00000376745 TRAK1Q9UPV9 953 aa47.56■■■■■ 5.2
PPP1CA-203ENST00000376745 TRPM1Q7Z4N2 1603 aa47.56■■■■■ 5.2
PPP1CA-203ENST00000376745 CADPS2Q86UW7 1296 aa47.55■■■■■ 5.2
PPP1CA-203ENST00000376745 ATF3P18847 181 aa47.53■■■■■ 5.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms