RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 MSH6P52701 1360 aa20.47■□□□□ 0.87
CLCN6-205ENST00000376492 ZFYVE9O95405 1425 aa20.47■□□□□ 0.87
CLCN6-205ENST00000376492 SLC52A1Q9NWF4 448 aa20.47■□□□□ 0.87
CLCN6-205ENST00000376492 ADGRL2O95490 1459 aa20.47■□□□□ 0.87
CLCN6-205ENST00000376492 PLEKHG1Q9ULL1 1385 aa20.45■□□□□ 0.86
CLCN6-205ENST00000376492 RPRD2Q5VT52 1461 aaKnown RBP20.44■□□□□ 0.86
CLCN6-205ENST00000376492 SLAIN2Q9P270 581 aa20.44■□□□□ 0.86
CLCN6-205ENST00000376492 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
CLCN6-205ENST00000376492 ANKRD50Q9ULJ7 1429 aa20.43■□□□□ 0.86
CLCN6-205ENST00000376492 FAM50AQ14320 339 aaKnown RBP20.42■□□□□ 0.86
CLCN6-205ENST00000376492 PHLPP1O60346 1717 aa20.41■□□□□ 0.86
CLCN6-205ENST00000376492 PPP1R15AO75807 674 aaPredicted RBP20.41■□□□□ 0.86
CLCN6-205ENST00000376492 JCADQ9P266 1359 aa20.41■□□□□ 0.86
CLCN6-205ENST00000376492 SETD1AO15047 1707 aaKnown RBP20.4■□□□□ 0.86
CLCN6-205ENST00000376492 GCC2Q8IWJ2 1684 aa20.4■□□□□ 0.86
CLCN6-205ENST00000376492 TMEM131LA2VDJ0 1609 aa20.39■□□□□ 0.86
CLCN6-205ENST00000376492 MYO5BQ9ULV0 1848 aa20.39■□□□□ 0.85
CLCN6-205ENST00000376492 COL16A1Q07092 1604 aaPredicted RBP20.38■□□□□ 0.85
CLCN6-205ENST00000376492 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
CLCN6-205ENST00000376492 NUTM2DQ5VT03 806 aaPredicted RBP20.37■□□□□ 0.85
CLCN6-205ENST00000376492 LRP6O75581 1613 aa20.36■□□□□ 0.85
CLCN6-205ENST00000376492 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
CLCN6-205ENST00000376492 CHGAP10645 457 aaKnown RBP20.35■□□□□ 0.85
CLCN6-205ENST00000376492 C14orf37Q86TY3 774 aa20.34■□□□□ 0.85
CLCN6-205ENST00000376492 TBX22Q9Y458 520 aa20.34■□□□□ 0.85
CLCN6-205ENST00000376492 UNC13BO14795 1591 aa20.33■□□□□ 0.84
CLCN6-205ENST00000376492 HDGFP51858 240 aaKnown RBP20.32■□□□□ 0.84
CLCN6-205ENST00000376492 NCOA3Q9Y6Q9 1424 aa20.32■□□□□ 0.84
CLCN6-205ENST00000376492 E9PCH4 1651 aa20.3■□□□□ 0.84
CLCN6-205ENST00000376492 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.3■□□□□ 0.84
CLCN6-205ENST00000376492 AHDC1Q5TGY3 1603 aaPredicted RBP20.29■□□□□ 0.84
CLCN6-205ENST00000376492 DIP2AQ14689 1571 aa20.29■□□□□ 0.84
CLCN6-205ENST00000376492 SPATA31A6Q5VVP1 1343 aa20.28■□□□□ 0.84
CLCN6-205ENST00000376492 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.28■□□□□ 0.84
CLCN6-205ENST00000376492 MEX3CQ5U5Q3 659 aaKnown RBP20.27■□□□□ 0.84
CLCN6-205ENST00000376492 CADPS2Q86UW7 1296 aa20.27■□□□□ 0.84
CLCN6-205ENST00000376492 C19orf44Q9H6X5 657 aa20.27■□□□□ 0.84
CLCN6-205ENST00000376492 PTPRUQ92729 1446 aa20.27■□□□□ 0.83
CLCN6-205ENST00000376492 PIK3R4Q99570 1358 aa20.26■□□□□ 0.83
CLCN6-205ENST00000376492 ATF3P18847 181 aa20.26■□□□□ 0.83
CLCN6-205ENST00000376492 IQGAP3Q86VI3 1631 aa20.24■□□□□ 0.83
CLCN6-205ENST00000376492 TRPM2O94759 1503 aa20.24■□□□□ 0.83
CLCN6-205ENST00000376492 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
CLCN6-205ENST00000376492 AMOTL2Q9Y2J4 779 aa20.24■□□□□ 0.83
CLCN6-205ENST00000376492 SHPRHQ149N8 1683 aa20.23■□□□□ 0.83
CLCN6-205ENST00000376492 ZNF772Q68DY9 489 aaPredicted RBP20.23■□□□□ 0.83
CLCN6-205ENST00000376492 BRINP3Q76B58 766 aa20.23■□□□□ 0.83
CLCN6-205ENST00000376492 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
CLCN6-205ENST00000376492 NUP155O75694 1391 aa20.21■□□□□ 0.83
CLCN6-205ENST00000376492 NUTM2BA6NNL0 878 aaPredicted RBP20.2■□□□□ 0.82
CLCN6-205ENST00000376492 NUTM2EB1AL46 878 aaPredicted RBP20.2■□□□□ 0.82
CLCN6-205ENST00000376492 NUTM2AQ8IVF1 878 aaPredicted RBP20.2■□□□□ 0.82
CLCN6-205ENST00000376492 UPF1Q92900 1129 aaKnown RBP eCLIP20.2■□□□□ 0.82
CLCN6-205ENST00000376492 ASXL1Q8IXJ9 1541 aa20.19■□□□□ 0.82
CLCN6-205ENST00000376492 NRXN3Q9Y4C0 1643 aa20.18■□□□□ 0.82
CLCN6-205ENST00000376492 DCCP43146 1447 aa20.18■□□□□ 0.82
CLCN6-205ENST00000376492 XRN1Q8IZH2 1706 aaKnown RBP20.17■□□□□ 0.82
CLCN6-205ENST00000376492 MST1RQ04912 1400 aa20.16■□□□□ 0.82
CLCN6-205ENST00000376492 SETBP1Q9Y6X0 1596 aa20.16■□□□□ 0.82
CLCN6-205ENST00000376492 RXRBP28702 533 aa20.15■□□□□ 0.82
CLCN6-205ENST00000376492 ITGAEP38570 1179 aa20.15■□□□□ 0.82
CLCN6-205ENST00000376492 METP08581 1390 aa20.14■□□□□ 0.81
CLCN6-205ENST00000376492 SETD5Q9C0A6 1442 aa20.13■□□□□ 0.81
CLCN6-205ENST00000376492 AFF2P51816 1311 aa20.13■□□□□ 0.81
CLCN6-205ENST00000376492 DDX17Q92841 729 aaKnown RBP20.12■□□□□ 0.81
CLCN6-205ENST00000376492 ZNF326Q5BKZ1 582 aaKnown RBP20.11■□□□□ 0.81
CLCN6-205ENST00000376492 NHSL1Q5SYE7 1610 aa20.11■□□□□ 0.81
CLCN6-205ENST00000376492 CDK12Q9NYV4 1490 aaPredicted RBP20.1■□□□□ 0.81
CLCN6-205ENST00000376492 SPHKAPQ2M3C7 1700 aa20.09■□□□□ 0.81
CLCN6-205ENST00000376492 ADGRL3Q9HAR2 1447 aa20.09■□□□□ 0.81
CLCN6-205ENST00000376492 C8orf37Q96NL8 207 aa20.07■□□□□ 0.8
CLCN6-205ENST00000376492 RGS12O14924 1447 aa20.07■□□□□ 0.8
CLCN6-205ENST00000376492 PNPLA6Q8IY17 1366 aa20.07■□□□□ 0.8
CLCN6-205ENST00000376492 NALCNQ8IZF0 1738 aa20.06■□□□□ 0.8
CLCN6-205ENST00000376492 LRRC59Q96AG4 307 aaKnown RBP20.06■□□□□ 0.8
CLCN6-205ENST00000376492 NEXMIFQ5QGS0 1516 aa20.06■□□□□ 0.8
CLCN6-205ENST00000376492 CLTCL1P53675 1640 aa20.05■□□□□ 0.8
CLCN6-205ENST00000376492 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
CLCN6-205ENST00000376492 C1orf167Q5SNV9 1468 aa20.01■□□□□ 0.79
CLCN6-205ENST00000376492 QTRT2Q9H974 415 aaKnown RBP20.01■□□□□ 0.79
CLCN6-205ENST00000376492 ADAMTS2O95450 1211 aa20■□□□□ 0.79
CLCN6-205ENST00000376492 RBM6P78332 1123 aaKnown RBP19.99■□□□□ 0.79
CLCN6-205ENST00000376492 ROBO2Q9HCK4 1378 aa19.98■□□□□ 0.79
CLCN6-205ENST00000376492 PTCH1Q13635 1447 aa19.97■□□□□ 0.79
CLCN6-205ENST00000376492 SRCAPQ6ZRS2 3230 aa19.97■□□□□ 0.79
CLCN6-205ENST00000376492 NGLY1Q96IV0 654 aa19.96■□□□□ 0.79
CLCN6-205ENST00000376492 ORAI2Q96SN7 254 aa19.96■□□□□ 0.79
CLCN6-205ENST00000376492 LAMC1P11047 1609 aa19.94■□□□□ 0.78
CLCN6-205ENST00000376492 SOS2Q07890 1332 aaPredicted RBP19.94■□□□□ 0.78
CLCN6-205ENST00000376492 NAIPQ13075 1403 aa19.91■□□□□ 0.78
CLCN6-205ENST00000376492 USP21Q9UK80 565 aa19.9■□□□□ 0.78
CLCN6-205ENST00000376492 PRAG1Q86YV5 1406 aa19.9■□□□□ 0.78
CLCN6-205ENST00000376492 VGFO15240 615 aaPredicted RBP19.89■□□□□ 0.77
CLCN6-205ENST00000376492 KIF1BO60333 1816 aa19.89■□□□□ 0.77
CLCN6-205ENST00000376492 ATAD2Q6PL18 1390 aa19.88■□□□□ 0.77
CLCN6-205ENST00000376492 HFM1A2PYH4 1435 aa19.86■□□□□ 0.77
CLCN6-205ENST00000376492 ATRNO75882 1429 aa19.86■□□□□ 0.77
CLCN6-205ENST00000376492 FNBP4Q8N3X1 1017 aaPredicted RBP19.86■□□□□ 0.77
CLCN6-205ENST00000376492 TRPC5Q9UL62 973 aaPredicted RBP19.86■□□□□ 0.77
CLCN6-205ENST00000376492 COL22A1Q8NFW1 1626 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms