RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
MDC1-201ENST00000376406 GOLGA6L3A6NEY3 463 aa13.65□□□□□ -0.22
MDC1-201ENST00000376406 CLUAP1Q96AJ1 413 aa13.65□□□□□ -0.22
MDC1-201ENST00000376406 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.23
MDC1-201ENST00000376406 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
MDC1-201ENST00000376406 CRBNQ96SW2 442 aa13.64□□□□□ -0.23
MDC1-201ENST00000376406 PDE4AP27815 886 aa13.64□□□□□ -0.23
MDC1-201ENST00000376406 TROQ12816 1431 aaPredicted RBP13.64□□□□□ -0.23
MDC1-201ENST00000376406 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
MDC1-201ENST00000376406 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
MDC1-201ENST00000376406 SLC52A1Q9NWF4 448 aa13.63□□□□□ -0.23
MDC1-201ENST00000376406 EXOC6Q8TAG9 804 aa13.63□□□□□ -0.23
MDC1-201ENST00000376406 HFM1A2PYH4 1435 aa13.63□□□□□ -0.23
MDC1-201ENST00000376406 CTTNBP2Q8WZ74 1663 aa13.63□□□□□ -0.23
MDC1-201ENST00000376406 TRIM6-TRIM34B2RNG4 842 aa13.63□□□□□ -0.23
MDC1-201ENST00000376406 TEFQ10587 303 aa13.63□□□□□ -0.23
MDC1-201ENST00000376406 ZKSCAN2Q63HK3 967 aa13.63□□□□□ -0.23
MDC1-201ENST00000376406 GZF1Q9H116 711 aaPredicted RBP13.63□□□□□ -0.23
MDC1-201ENST00000376406 RRP7AQ9Y3A4 280 aaKnown RBP13.63□□□□□ -0.23
MDC1-201ENST00000376406 CSPP1Q1MSJ5 1256 aa13.62□□□□□ -0.23
MDC1-201ENST00000376406 GNL2Q13823 731 aaKnown RBP13.62□□□□□ -0.23
MDC1-201ENST00000376406 TTC5Q8N0Z6 440 aa13.62□□□□□ -0.23
MDC1-201ENST00000376406 HSP90B1P14625 803 aaKnown RBP13.61□□□□□ -0.23
MDC1-201ENST00000376406 PLIN1O60240 522 aa13.61□□□□□ -0.23
MDC1-201ENST00000376406 ISY1Q9ULR0 285 aaKnown RBP13.61□□□□□ -0.23
MDC1-201ENST00000376406 BRD4O60885 1362 aaPredicted RBP13.61□□□□□ -0.23
MDC1-201ENST00000376406 DDX11L8A8MPP1 907 aa13.61□□□□□ -0.23
MDC1-201ENST00000376406 ST18O60284 1047 aa13.61□□□□□ -0.23
MDC1-201ENST00000376406 EPRSP07814 1512 aaKnown RBP13.61□□□□□ -0.23
MDC1-201ENST00000376406 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
MDC1-201ENST00000376406 ITSN2Q9NZM3 1697 aa13.61□□□□□ -0.23
MDC1-201ENST00000376406 ZNF644Q9H582 1327 aaPredicted RBP13.61□□□□□ -0.23
MDC1-201ENST00000376406 WWC1Q8IX03 1113 aa13.61□□□□□ -0.23
MDC1-201ENST00000376406 NEXNQ0ZGT2 675 aa13.6□□□□□ -0.23
MDC1-201ENST00000376406 CHMP3Q9Y3E7 222 aa13.6□□□□□ -0.23
MDC1-201ENST00000376406 SLC4A10Q6U841 1118 aa13.6□□□□□ -0.23
MDC1-201ENST00000376406 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
MDC1-201ENST00000376406 KIAA2012Q0VF49 1180 aa13.59□□□□□ -0.23
MDC1-201ENST00000376406 ROCK1Q13464 1354 aa13.59□□□□□ -0.23
MDC1-201ENST00000376406 PCF11O94913 1555 aaKnown RBP13.59□□□□□ -0.23
MDC1-201ENST00000376406 SMG6Q86US8 1419 aaKnown RBP13.58□□□□□ -0.23
MDC1-201ENST00000376406 DDX58O95786 925 aaKnown RBP13.58□□□□□ -0.23
MDC1-201ENST00000376406 LTV1Q96GA3 475 aaPredicted RBP13.58□□□□□ -0.24
MDC1-201ENST00000376406 PHF14O94880 888 aa13.57□□□□□ -0.24
MDC1-201ENST00000376406 FRAT2O75474 233 aaPredicted RBP13.56□□□□□ -0.24
MDC1-201ENST00000376406 RUNDC1Q96C34 613 aa13.56□□□□□ -0.24
MDC1-201ENST00000376406 KIF3AQ9Y496 699 aa13.56□□□□□ -0.24
MDC1-201ENST00000376406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.56□□□□□ -0.24
MDC1-201ENST00000376406 DDX19BQ9UMR2 479 aa13.56□□□□□ -0.24
MDC1-201ENST00000376406 ANKLE2Q86XL3 938 aa13.56□□□□□ -0.24
MDC1-201ENST00000376406 APAF1O14727 1248 aa13.56□□□□□ -0.24
MDC1-201ENST00000376406 AMOTL1Q8IY63 956 aa13.56□□□□□ -0.24
MDC1-201ENST00000376406 MINK1Q8N4C8 1332 aaPredicted RBP13.55□□□□□ -0.24
MDC1-201ENST00000376406 NOL10Q9BSC4 688 aaKnown RBP13.55□□□□□ -0.24
MDC1-201ENST00000376406 RAPGEF4Q8WZA2 1011 aa13.55□□□□□ -0.24
MDC1-201ENST00000376406 KIAA1107Q9UPP5 1409 aa13.55□□□□□ -0.24
MDC1-201ENST00000376406 AAMPQ13685 434 aa13.55□□□□□ -0.24
MDC1-201ENST00000376406 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
MDC1-201ENST00000376406 PTPN23Q9H3S7 1636 aa13.55□□□□□ -0.24
MDC1-201ENST00000376406 NUTM2FA1L443 756 aa13.55□□□□□ -0.24
MDC1-201ENST00000376406 ANKRD45Q5TZF3 282 aa13.55□□□□□ -0.24
MDC1-201ENST00000376406 WDR97A6NE52 1622 aa13.54□□□□□ -0.24
MDC1-201ENST00000376406 TPM4P67936 248 aa13.54□□□□□ -0.24
MDC1-201ENST00000376406 DIAPH1O60610 1272 aaKnown RBP13.54□□□□□ -0.24
MDC1-201ENST00000376406 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
MDC1-201ENST00000376406 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
MDC1-201ENST00000376406 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
MDC1-201ENST00000376406 BCL2L13Q9BXK5 485 aa13.53□□□□□ -0.24
MDC1-201ENST00000376406 DAPK1P53355 1430 aa13.53□□□□□ -0.24
MDC1-201ENST00000376406 SKOR2Q2VWA4 1001 aaPredicted RBP13.53□□□□□ -0.24
MDC1-201ENST00000376406 TEX14Q8IWB6 1497 aa13.52□□□□□ -0.24
MDC1-201ENST00000376406 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
MDC1-201ENST00000376406 MAP3K1Q13233 1512 aa13.52□□□□□ -0.25
MDC1-201ENST00000376406 KIF16BQ96L93 1317 aa13.52□□□□□ -0.25
MDC1-201ENST00000376406 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.25
MDC1-201ENST00000376406 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
MDC1-201ENST00000376406 DMRT2Q9Y5R5 561 aa13.51□□□□□ -0.25
MDC1-201ENST00000376406 CD109Q6YHK3 1445 aa13.51□□□□□ -0.25
MDC1-201ENST00000376406 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
MDC1-201ENST00000376406 DZIP1LQ8IYY4 767 aaKnown RBP13.51□□□□□ -0.25
MDC1-201ENST00000376406 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
MDC1-201ENST00000376406 GSE1Q14687 1217 aa13.5□□□□□ -0.25
MDC1-201ENST00000376406 RIPK4P57078 832 aa13.5□□□□□ -0.25
MDC1-201ENST00000376406 PROSER2Q86WR7 435 aaPredicted RBP13.5□□□□□ -0.25
MDC1-201ENST00000376406 ZNF692Q9BU19 519 aaPredicted RBP13.5□□□□□ -0.25
MDC1-201ENST00000376406 CCDC141Q6ZP82 1450 aa13.5□□□□□ -0.25
MDC1-201ENST00000376406 MSH5O43196 834 aa13.49□□□□□ -0.25
MDC1-201ENST00000376406 ANKRD30BQ9BXX2 1392 aa13.48□□□□□ -0.25
MDC1-201ENST00000376406 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
MDC1-201ENST00000376406 TRIM34Q9BYJ4 488 aa13.48□□□□□ -0.25
MDC1-201ENST00000376406 API5Q9BZZ5 524 aaKnown RBP13.48□□□□□ -0.25
MDC1-201ENST00000376406 NOL8Q76FK4 1167 aaKnown RBP13.47□□□□□ -0.25
MDC1-201ENST00000376406 RILPL2Q969X0 211 aa13.47□□□□□ -0.25
MDC1-201ENST00000376406 AFAP1Q8N556 730 aa13.47□□□□□ -0.25
MDC1-201ENST00000376406 REC8O95072 547 aa13.46□□□□□ -0.25
MDC1-201ENST00000376406 PHF23Q9BUL5 403 aaPredicted RBP13.46□□□□□ -0.25
MDC1-201ENST00000376406 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.26
MDC1-201ENST00000376406 ATP6V1DQ9Y5K8 247 aa13.46□□□□□ -0.26
MDC1-201ENST00000376406 C9orf78Q9NZ63 289 aaPredicted RBP13.45□□□□□ -0.26
MDC1-201ENST00000376406 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms