RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 VGFO15240 615 aaPredicted RBP32.8■■■□□ 2.84
HLA-C-202ENST00000376237 MYOM2P54296 1465 aa32.79■■■□□ 2.84
HLA-C-202ENST00000376237 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.78■■■□□ 2.84
HLA-C-202ENST00000376237 NEXMIFQ5QGS0 1516 aa32.78■■■□□ 2.84
HLA-C-202ENST00000376237 ZNF142P52746 1687 aaPredicted RBP32.78■■■□□ 2.84
HLA-C-202ENST00000376237 TMEM2Q9UHN6 1383 aa32.77■■■□□ 2.84
HLA-C-202ENST00000376237 ZFYVE9O95405 1425 aa32.77■■■□□ 2.84
HLA-C-202ENST00000376237 MYO5BQ9ULV0 1848 aa32.76■■■□□ 2.84
HLA-C-202ENST00000376237 RIMS2Q9UQ26 1411 aa32.75■■■□□ 2.83
HLA-C-202ENST00000376237 IFT172Q9UG01 1749 aa32.75■■■□□ 2.83
HLA-C-202ENST00000376237 PPLO60437 1756 aa32.73■■■□□ 2.83
HLA-C-202ENST00000376237 PRAG1Q86YV5 1406 aa32.73■■■□□ 2.83
HLA-C-202ENST00000376237 NBPF8Q3BBV2 869 aa32.72■■■□□ 2.83
HLA-C-202ENST00000376237 SLIT1O75093 1534 aa32.71■■■□□ 2.83
HLA-C-202ENST00000376237 ADGRF5Q8IZF2 1346 aa32.7■■■□□ 2.82
HLA-C-202ENST00000376237 ARHGAP23Q9P227 1491 aa32.7■■■□□ 2.82
HLA-C-202ENST00000376237 NRXN1Q9ULB1 1477 aa32.7■■■□□ 2.82
HLA-C-202ENST00000376237 EID1Q9Y6B2 187 aa32.69■■■□□ 2.82
HLA-C-202ENST00000376237 NUTM2DQ5VT03 806 aaPredicted RBP32.66■■■□□ 2.82
HLA-C-202ENST00000376237 TXNDC2Q86VQ3 553 aa32.64■■■□□ 2.82
HLA-C-202ENST00000376237 PIK3C2GO75747 1445 aa32.63■■■□□ 2.81
HLA-C-202ENST00000376237 LTKP29376 864 aa32.6■■■□□ 2.81
HLA-C-202ENST00000376237 ANKLE2Q86XL3 938 aa32.6■■■□□ 2.81
HLA-C-202ENST00000376237 RALGAPBQ86X10 1494 aa32.59■■■□□ 2.81
HLA-C-202ENST00000376237 C14orf93Q9H972 538 aaKnown RBP32.57■■■□□ 2.8
HLA-C-202ENST00000376237 SCAF11Q99590 1463 aaKnown RBP32.57■■■□□ 2.8
HLA-C-202ENST00000376237 PLEKHG1Q9ULL1 1385 aa32.55■■■□□ 2.8
HLA-C-202ENST00000376237 LMTK3Q96Q04 1460 aa32.54■■■□□ 2.8
HLA-C-202ENST00000376237 TRPM1Q7Z4N2 1603 aa32.54■■■□□ 2.8
HLA-C-202ENST00000376237 CFAP70Q5T0N1 1121 aa32.53■■■□□ 2.8
HLA-C-202ENST00000376237 ROCK2O75116 1388 aaKnown RBP32.53■■■□□ 2.8
HLA-C-202ENST00000376237 KIAA1210Q9ULL0 1709 aa32.53■■■□□ 2.8
HLA-C-202ENST00000376237 GPRASP1Q5JY77 1395 aa32.51■■■□□ 2.79
HLA-C-202ENST00000376237 SETBP1Q9Y6X0 1596 aa32.49■■■□□ 2.79
HLA-C-202ENST00000376237 NBPF1Q3BBV0 1214 aa32.49■■■□□ 2.79
HLA-C-202ENST00000376237 LAMC1P11047 1609 aa32.48■■■□□ 2.79
HLA-C-202ENST00000376237 BCANQ96GW7 911 aa32.48■■■□□ 2.79
HLA-C-202ENST00000376237 CARD11Q9BXL7 1154 aa32.48■■■□□ 2.79
HLA-C-202ENST00000376237 ALKQ9UM73 1620 aa32.44■■■□□ 2.78
HLA-C-202ENST00000376237 MED14O60244 1454 aa32.43■■■□□ 2.78
HLA-C-202ENST00000376237 HSPA2P54652 639 aa32.42■■■□□ 2.78
HLA-C-202ENST00000376237 ADAMTS13Q76LX8 1427 aa32.41■■■□□ 2.78
HLA-C-202ENST00000376237 TBX22Q9Y458 520 aa32.41■■■□□ 2.78
HLA-C-202ENST00000376237 NRXN3Q9Y4C0 1643 aa32.41■■■□□ 2.78
HLA-C-202ENST00000376237 SENP3Q9H4L4 574 aaPredicted RBP32.4■■■□□ 2.78
HLA-C-202ENST00000376237 NCKAP5LQ9HCH0 1330 aa32.38■■■□□ 2.77
HLA-C-202ENST00000376237 EIF4G2P78344 907 aaKnown RBP eCLIP32.38■■■□□ 2.77
HLA-C-202ENST00000376237 ADGRB1O14514 1584 aa32.38■■■□□ 2.77
HLA-C-202ENST00000376237 NPHP4O75161 1426 aaPredicted RBP32.38■■■□□ 2.77
HLA-C-202ENST00000376237 POLR1AO95602 1720 aaPredicted RBP32.37■■■□□ 2.77
HLA-C-202ENST00000376237 DIP2AQ14689 1571 aa32.37■■■□□ 2.77
HLA-C-202ENST00000376237 IQGAP1P46940 1657 aa32.36■■■□□ 2.77
HLA-C-202ENST00000376237 TMEM132EQ6IEE7 984 aa32.36■■■□□ 2.77
HLA-C-202ENST00000376237 SLC26A8Q96RN1 970 aa32.34■■■□□ 2.77
HLA-C-202ENST00000376237 USP47Q96K76 1375 aa32.33■■■□□ 2.77
HLA-C-202ENST00000376237 SETD1AO15047 1707 aaKnown RBP32.31■■■□□ 2.76
HLA-C-202ENST00000376237 METP08581 1390 aa32.31■■■□□ 2.76
HLA-C-202ENST00000376237 ASXL1Q8IXJ9 1541 aa32.3■■■□□ 2.76
HLA-C-202ENST00000376237 PIK3R4Q99570 1358 aa32.3■■■□□ 2.76
HLA-C-202ENST00000376237 YTHDC2Q9H6S0 1430 aaKnown RBP32.29■■■□□ 2.76
HLA-C-202ENST00000376237 EIF3AQ14152 1382 aaKnown RBP32.28■■■□□ 2.76
HLA-C-202ENST00000376237 LRPPRCP42704 1394 aaKnown RBP32.27■■■□□ 2.76
HLA-C-202ENST00000376237 HSPA5P11021 654 aaKnown RBP32.27■■■□□ 2.76
HLA-C-202ENST00000376237 ABCC11Q96J66 1382 aa32.25■■■□□ 2.75
HLA-C-202ENST00000376237 TRAK1Q9UPV9 953 aa32.25■■■□□ 2.75
HLA-C-202ENST00000376237 STK26Q9P289 416 aa32.22■■■□□ 2.75
HLA-C-202ENST00000376237 ST20-MTHFSA0A0A6YYL1 179 aa32.21■■■□□ 2.75
HLA-C-202ENST00000376237 DMRT2Q9Y5R5 561 aa32.21■■■□□ 2.75
HLA-C-202ENST00000376237 SIRT1Q96EB6 747 aa32.2■■■□□ 2.74
HLA-C-202ENST00000376237 STRCQ7RTU9 1775 aa32.2■■■□□ 2.74
HLA-C-202ENST00000376237 TECPR2O15040 1411 aa32.18■■■□□ 2.74
HLA-C-202ENST00000376237 DLC1Q96QB1 1528 aa32.17■■■□□ 2.74
HLA-C-202ENST00000376237 SLC24A1O60721 1099 aa32.16■■■□□ 2.74
HLA-C-202ENST00000376237 AMOTL2Q9Y2J4 779 aa32.16■■■□□ 2.74
HLA-C-202ENST00000376237 ZNF316A6NFI3 1004 aaPredicted RBP32.16■■■□□ 2.74
HLA-C-202ENST00000376237 PTPRUQ92729 1446 aa32.15■■■□□ 2.74
HLA-C-202ENST00000376237 HIRIP3Q9BW71 556 aaPredicted RBP32.15■■■□□ 2.74
HLA-C-202ENST00000376237 CENPJQ9HC77 1338 aaPredicted RBP32.14■■■□□ 2.74
HLA-C-202ENST00000376237 FAM135BQ49AJ0 1406 aa32.12■■■□□ 2.73
HLA-C-202ENST00000376237 KNDC1Q76NI1 1749 aa32.12■■■□□ 2.73
HLA-C-202ENST00000376237 KCNA6P17658 529 aa32.1■■■□□ 2.73
HLA-C-202ENST00000376237 POGKQ9P215 609 aa32.1■■■□□ 2.73
HLA-C-202ENST00000376237 CPS1P31327 1500 aa32.1■■■□□ 2.73
HLA-C-202ENST00000376237 PRAM1Q96QH2 718 aa32.1■■■□□ 2.73
HLA-C-202ENST00000376237 ARHGEF28Q8N1W1 1705 aaKnown RBP32.09■■■□□ 2.73
HLA-C-202ENST00000376237 TESK2Q96S53 571 aa32.09■■■□□ 2.73
HLA-C-202ENST00000376237 SBNO2Q9Y2G9 1366 aa32.09■■■□□ 2.73
HLA-C-202ENST00000376237 PTCH1Q13635 1447 aa32.08■■■□□ 2.73
HLA-C-202ENST00000376237 CHD2O14647 1828 aaKnown RBP32.07■■■□□ 2.72
HLA-C-202ENST00000376237 XRN1Q8IZH2 1706 aaKnown RBP32.06■■■□□ 2.72
HLA-C-202ENST00000376237 ROBO2Q9HCK4 1378 aa32.05■■■□□ 2.72
HLA-C-202ENST00000376237 WAPLQ7Z5K2 1190 aa32.03■■■□□ 2.72
HLA-C-202ENST00000376237 TMF1P82094 1093 aa32.02■■■□□ 2.72
HLA-C-202ENST00000376237 NWD1Q149M9 1564 aa32.02■■■□□ 2.72
HLA-C-202ENST00000376237 SAFB2Q14151 953 aaKnown RBP eCLIP31.98■■■□□ 2.71
HLA-C-202ENST00000376237 PLEKHH1Q9ULM0 1364 aa31.98■■■□□ 2.71
HLA-C-202ENST00000376237 QRICH2Q9H0J4 1663 aa31.97■■■□□ 2.71
HLA-C-202ENST00000376237 NKTRP30414 1462 aaKnown RBP31.97■■■□□ 2.71
HLA-C-202ENST00000376237 CDCA8Q53HL2 280 aa31.96■■■□□ 2.71
HLA-C-202ENST00000376237 C11orf95C9JLR9 678 aaPredicted RBP31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms