RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 TXNDC2Q86VQ3 553 aa23.64■■□□□ 1.37
SDHB-201ENST00000375499 SLC52A1Q9NWF4 448 aa23.64■■□□□ 1.37
SDHB-201ENST00000375499 STAG3Q9UJ98 1225 aa23.64■■□□□ 1.37
SDHB-201ENST00000375499 SPHKAPQ2M3C7 1700 aa23.62■■□□□ 1.37
SDHB-201ENST00000375499 EID1Q9Y6B2 187 aa23.6■■□□□ 1.37
SDHB-201ENST00000375499 ZFYVE9O95405 1425 aa23.59■■□□□ 1.37
SDHB-201ENST00000375499 RIMS2Q9UQ26 1411 aa23.54■■□□□ 1.36
SDHB-201ENST00000375499 FAM135BQ49AJ0 1406 aa23.53■■□□□ 1.36
SDHB-201ENST00000375499 CLTCL1P53675 1640 aa23.53■■□□□ 1.36
SDHB-201ENST00000375499 CHGAP10645 457 aaKnown RBP23.51■■□□□ 1.35
SDHB-201ENST00000375499 SENP3Q9H4L4 574 aaPredicted RBP23.51■■□□□ 1.35
SDHB-201ENST00000375499 TRPM2O94759 1503 aa23.5■■□□□ 1.35
SDHB-201ENST00000375499 RGS17Q9UGC6 210 aaPredicted RBP23.5■■□□□ 1.35
SDHB-201ENST00000375499 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
SDHB-201ENST00000375499 TRIM52Q96A61 297 aa23.48■■□□□ 1.35
SDHB-201ENST00000375499 SLC26A8Q96RN1 970 aa23.48■■□□□ 1.35
SDHB-201ENST00000375499 PLEKHG1Q9ULL1 1385 aa23.47■■□□□ 1.35
SDHB-201ENST00000375499 KCNA6P17658 529 aa23.46■■□□□ 1.35
SDHB-201ENST00000375499 NUTM2DQ5VT03 806 aaPredicted RBP23.46■■□□□ 1.35
SDHB-201ENST00000375499 NWD1Q149M9 1564 aa23.44■■□□□ 1.34
SDHB-201ENST00000375499 ADAMTS13Q76LX8 1427 aa23.42■■□□□ 1.34
SDHB-201ENST00000375499 PPP1R15AO75807 674 aaPredicted RBP23.41■■□□□ 1.34
SDHB-201ENST00000375499 SLC4A1APQ9BWU0 796 aaKnown RBP23.41■■□□□ 1.34
SDHB-201ENST00000375499 KIF1BO60333 1816 aa23.4■■□□□ 1.34
SDHB-201ENST00000375499 NRXN3Q9Y4C0 1643 aa23.4■■□□□ 1.34
SDHB-201ENST00000375499 CHD2O14647 1828 aaKnown RBP23.4■■□□□ 1.34
SDHB-201ENST00000375499 FOXD1Q16676 465 aa23.39■■□□□ 1.33
SDHB-201ENST00000375499 PROSER2Q86WR7 435 aaPredicted RBP23.39■■□□□ 1.33
SDHB-201ENST00000375499 TMEM94Q12767 1356 aa23.39■■□□□ 1.33
SDHB-201ENST00000375499 NEXMIFQ5QGS0 1516 aa23.38■■□□□ 1.33
SDHB-201ENST00000375499 BCANQ96GW7 911 aa23.38■■□□□ 1.33
SDHB-201ENST00000375499 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.37■■□□□ 1.33
SDHB-201ENST00000375499 SETD5Q9C0A6 1442 aa23.36■■□□□ 1.33
SDHB-201ENST00000375499 NKTRP30414 1462 aaKnown RBP23.36■■□□□ 1.33
SDHB-201ENST00000375499 DIP2AQ14689 1571 aa23.35■■□□□ 1.33
SDHB-201ENST00000375499 HDGFP51858 240 aaKnown RBP23.34■■□□□ 1.33
SDHB-201ENST00000375499 POTEAQ6S8J7 498 aa23.34■■□□□ 1.33
SDHB-201ENST00000375499 RBM33Q96EV2 1170 aaKnown RBP23.34■■□□□ 1.33
SDHB-201ENST00000375499 SETBP1Q9Y6X0 1596 aa23.33■■□□□ 1.33
SDHB-201ENST00000375499 RAB3GAP2Q9H2M9 1393 aa23.32■■□□□ 1.32
SDHB-201ENST00000375499 ZNF326Q5BKZ1 582 aaKnown RBP23.32■■□□□ 1.32
SDHB-201ENST00000375499 TBX22Q9Y458 520 aa23.31■■□□□ 1.32
SDHB-201ENST00000375499 MPHOSPH9Q99550 1183 aa23.3■■□□□ 1.32
SDHB-201ENST00000375499 SLAIN2Q9P270 581 aa23.3■■□□□ 1.32
SDHB-201ENST00000375499 PTPRUQ92729 1446 aa23.3■■□□□ 1.32
SDHB-201ENST00000375499 MSH6P52701 1360 aa23.29■■□□□ 1.32
SDHB-201ENST00000375499 ROBO1Q9Y6N7 1651 aa23.28■■□□□ 1.32
SDHB-201ENST00000375499 PPLO60437 1756 aa23.27■■□□□ 1.32
SDHB-201ENST00000375499 XRN1Q8IZH2 1706 aaKnown RBP23.26■■□□□ 1.31
SDHB-201ENST00000375499 JCADQ9P266 1359 aa23.26■■□□□ 1.31
SDHB-201ENST00000375499 SETD1AO15047 1707 aaKnown RBP23.25■■□□□ 1.31
SDHB-201ENST00000375499 NCOA3Q9Y6Q9 1424 aa23.25■■□□□ 1.31
SDHB-201ENST00000375499 PIK3R4Q99570 1358 aa23.24■■□□□ 1.31
SDHB-201ENST00000375499 CCDC144AA2RUR9 1427 aa23.23■■□□□ 1.31
SDHB-201ENST00000375499 METP08581 1390 aa23.22■■□□□ 1.31
SDHB-201ENST00000375499 SPATA31E1Q6ZUB1 1445 aa23.22■■□□□ 1.31
SDHB-201ENST00000375499 IFT172Q9UG01 1749 aa23.21■■□□□ 1.31
SDHB-201ENST00000375499 SPATA31A6Q5VVP1 1343 aa23.18■■□□□ 1.3
SDHB-201ENST00000375499 AMOTL2Q9Y2J4 779 aa23.17■■□□□ 1.3
SDHB-201ENST00000375499 PHLPP1O60346 1717 aa23.16■■□□□ 1.3
SDHB-201ENST00000375499 ZNF772Q68DY9 489 aaPredicted RBP23.16■■□□□ 1.3
SDHB-201ENST00000375499 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.16■■□□□ 1.3
SDHB-201ENST00000375499 CADPS2Q86UW7 1296 aa23.15■■□□□ 1.3
SDHB-201ENST00000375499 RPGRIP1LQ68CZ1 1315 aa23.14■■□□□ 1.3
SDHB-201ENST00000375499 RGL3Q3MIN7 710 aa23.13■■□□□ 1.29
SDHB-201ENST00000375499 C19orf44Q9H6X5 657 aa23.13■■□□□ 1.29
SDHB-201ENST00000375499 VGFO15240 615 aaPredicted RBP23.12■■□□□ 1.29
SDHB-201ENST00000375499 ADGRF5Q8IZF2 1346 aa23.11■■□□□ 1.29
SDHB-201ENST00000375499 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
SDHB-201ENST00000375499 NALCNQ8IZF0 1738 aa23.09■■□□□ 1.29
SDHB-201ENST00000375499 ATF3P18847 181 aa23.09■■□□□ 1.29
SDHB-201ENST00000375499 C14orf37Q86TY3 774 aa23.09■■□□□ 1.29
SDHB-201ENST00000375499 MEX3CQ5U5Q3 659 aaKnown RBP23.08■■□□□ 1.29
SDHB-201ENST00000375499 ANKRD30BQ9BXX2 1392 aa23.08■■□□□ 1.29
SDHB-201ENST00000375499 ASXL1Q8IXJ9 1541 aa23.08■■□□□ 1.28
SDHB-201ENST00000375499 COL16A1Q07092 1604 aaPredicted RBP23.07■■□□□ 1.28
SDHB-201ENST00000375499 UPF1Q92900 1129 aaKnown RBP eCLIP23.05■■□□□ 1.28
SDHB-201ENST00000375499 PIK3C2GO75747 1445 aa23.05■■□□□ 1.28
SDHB-201ENST00000375499 HRCP23327 699 aa23.04■■□□□ 1.28
SDHB-201ENST00000375499 PTCH1Q13635 1447 aa23.04■■□□□ 1.28
SDHB-201ENST00000375499 PRAG1Q86YV5 1406 aa23.04■■□□□ 1.28
SDHB-201ENST00000375499 ROBO2Q9HCK4 1378 aa23.03■■□□□ 1.28
SDHB-201ENST00000375499 ADGRL3Q9HAR2 1447 aa23.02■■□□□ 1.28
SDHB-201ENST00000375499 AHDC1Q5TGY3 1603 aaPredicted RBP23.02■■□□□ 1.28
SDHB-201ENST00000375499 RXRBP28702 533 aa23.02■■□□□ 1.28
SDHB-201ENST00000375499 DCCP43146 1447 aa23.01■■□□□ 1.27
SDHB-201ENST00000375499 NRXN1Q9ULB1 1477 aa23■■□□□ 1.27
SDHB-201ENST00000375499 MYOM2P54296 1465 aa22.99■■□□□ 1.27
SDHB-201ENST00000375499 SHPRHQ149N8 1683 aa22.99■■□□□ 1.27
SDHB-201ENST00000375499 MST1RQ04912 1400 aa22.98■■□□□ 1.27
SDHB-201ENST00000375499 CDK12Q9NYV4 1490 aaPredicted RBP22.98■■□□□ 1.27
SDHB-201ENST00000375499 LRP6O75581 1613 aa22.97■■□□□ 1.27
SDHB-201ENST00000375499 KNDC1Q76NI1 1749 aa22.96■■□□□ 1.27
SDHB-201ENST00000375499 BRINP3Q76B58 766 aa22.95■■□□□ 1.26
SDHB-201ENST00000375499 TMEM132EQ6IEE7 984 aa22.94■■□□□ 1.26
SDHB-201ENST00000375499 TECPR2O15040 1411 aa22.93■■□□□ 1.26
SDHB-201ENST00000375499 LRRC59Q96AG4 307 aaKnown RBP22.93■■□□□ 1.26
SDHB-201ENST00000375499 LRPPRCP42704 1394 aaKnown RBP22.91■■□□□ 1.26
SDHB-201ENST00000375499 LAMC1P11047 1609 aa22.91■■□□□ 1.26
SDHB-201ENST00000375499 NHSL1Q5SYE7 1610 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms