RNA–Protein interactions for RNA: ENST00000375128.4

XPA-201, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPA, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-201ENST00000375128 NUTM2DQ5VT03 806 aaPredicted RBP31.76■■■□□ 2.68
XPA-201ENST00000375128 SCAF11Q99590 1463 aaKnown RBP31.76■■■□□ 2.67
XPA-201ENST00000375128 PPP1R15AO75807 674 aaPredicted RBP31.75■■■□□ 2.67
XPA-201ENST00000375128 DMRT2Q9Y5R5 561 aa31.75■■■□□ 2.67
XPA-201ENST00000375128 ZFYVE9O95405 1425 aa31.73■■■□□ 2.67
XPA-201ENST00000375128 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.73■■■□□ 2.67
XPA-201ENST00000375128 NEURL4Q96JN8 1562 aa31.72■■■□□ 2.67
XPA-201ENST00000375128 SPATA31E1Q6ZUB1 1445 aa31.71■■■□□ 2.67
XPA-201ENST00000375128 NPHP4O75161 1426 aaPredicted RBP31.69■■■□□ 2.66
XPA-201ENST00000375128 BCANQ96GW7 911 aa31.68■■■□□ 2.66
XPA-201ENST00000375128 SENP3Q9H4L4 574 aaPredicted RBP31.68■■■□□ 2.66
XPA-201ENST00000375128 RPGRIP1LQ68CZ1 1315 aa31.68■■■□□ 2.66
XPA-201ENST00000375128 SIN3AQ96ST3 1273 aa31.67■■■□□ 2.66
XPA-201ENST00000375128 MED14O60244 1454 aa31.67■■■□□ 2.66
XPA-201ENST00000375128 NEXMIFQ5QGS0 1516 aa31.67■■■□□ 2.66
XPA-201ENST00000375128 IQGAP1P46940 1657 aa31.66■■■□□ 2.66
XPA-201ENST00000375128 NEUROD1Q13562 356 aa31.65■■■□□ 2.66
XPA-201ENST00000375128 PPLO60437 1756 aa31.63■■■□□ 2.65
XPA-201ENST00000375128 VGFO15240 615 aaPredicted RBP31.6■■■□□ 2.65
XPA-201ENST00000375128 PLEKHG1Q9ULL1 1385 aa31.6■■■□□ 2.65
XPA-201ENST00000375128 IFT172Q9UG01 1749 aa31.57■■■□□ 2.64
XPA-201ENST00000375128 CCER1Q8TC90 406 aaPredicted RBP31.57■■■□□ 2.64
XPA-201ENST00000375128 SLC26A8Q96RN1 970 aa31.56■■■□□ 2.64
XPA-201ENST00000375128 DCAF11Q8TEB1 546 aa31.53■■■□□ 2.64
XPA-201ENST00000375128 KDM2AQ9Y2K7 1162 aa31.52■■■□□ 2.64
XPA-201ENST00000375128 ADGRF5Q8IZF2 1346 aa31.51■■■□□ 2.64
XPA-201ENST00000375128 SETBP1Q9Y6X0 1596 aa31.46■■■□□ 2.63
XPA-201ENST00000375128 ADAMTS13Q76LX8 1427 aa31.46■■■□□ 2.63
XPA-201ENST00000375128 NRXN3Q9Y4C0 1643 aa31.46■■■□□ 2.63
XPA-201ENST00000375128 ZNF335Q9H4Z2 1342 aaPredicted RBP31.45■■■□□ 2.63
XPA-201ENST00000375128 CLSPNQ9HAW4 1339 aa31.45■■■□□ 2.63
XPA-201ENST00000375128 TBX22Q9Y458 520 aa31.45■■■□□ 2.63
XPA-201ENST00000375128 MYOM2P54296 1465 aa31.45■■■□□ 2.62
XPA-201ENST00000375128 L3MBTL2Q969R5 705 aa31.43■■■□□ 2.62
XPA-201ENST00000375128 STAC3Q96MF2 364 aa31.42■■■□□ 2.62
XPA-201ENST00000375128 DIP2AQ14689 1571 aa31.41■■■□□ 2.62
XPA-201ENST00000375128 TONSLQ96HA7 1378 aa31.4■■■□□ 2.62
XPA-201ENST00000375128 PIK3C2GO75747 1445 aa31.38■■■□□ 2.61
XPA-201ENST00000375128 ALKQ9UM73 1620 aa31.38■■■□□ 2.61
XPA-201ENST00000375128 NRXN1Q9ULB1 1477 aa31.37■■■□□ 2.61
XPA-201ENST00000375128 KCNA6P17658 529 aa31.33■■■□□ 2.61
XPA-201ENST00000375128 METP08581 1390 aa31.33■■■□□ 2.61
XPA-201ENST00000375128 STRCP1A6NGW2 1772 aa31.33■■■□□ 2.61
XPA-201ENST00000375128 CHD2O14647 1828 aaKnown RBP31.32■■■□□ 2.6
XPA-201ENST00000375128 SETD1AO15047 1707 aaKnown RBP31.32■■■□□ 2.6
XPA-201ENST00000375128 PIK3R4Q99570 1358 aa31.32■■■□□ 2.6
XPA-201ENST00000375128 CFAP70Q5T0N1 1121 aa31.32■■■□□ 2.6
XPA-201ENST00000375128 C14orf93Q9H972 538 aaKnown RBP31.32■■■□□ 2.6
XPA-201ENST00000375128 LTBP4Q8N2S1 1624 aa31.31■■■□□ 2.6
XPA-201ENST00000375128 AMOTL2Q9Y2J4 779 aa31.28■■■□□ 2.6
XPA-201ENST00000375128 LAMC1P11047 1609 aa31.27■■■□□ 2.6
XPA-201ENST00000375128 TMEM132EQ6IEE7 984 aa31.26■■■□□ 2.6
XPA-201ENST00000375128 PTPRUQ92729 1446 aa31.26■■■□□ 2.6
XPA-201ENST00000375128 CPS1P31327 1500 aa31.26■■■□□ 2.59
XPA-201ENST00000375128 NWD1Q149M9 1564 aa31.25■■■□□ 2.59
XPA-201ENST00000375128 PRAG1Q86YV5 1406 aa31.25■■■□□ 2.59
XPA-201ENST00000375128 PROSER2Q86WR7 435 aaPredicted RBP31.21■■■□□ 2.59
XPA-201ENST00000375128 STK26Q9P289 416 aa31.2■■■□□ 2.59
XPA-201ENST00000375128 ASXL1Q8IXJ9 1541 aa31.19■■■□□ 2.58
XPA-201ENST00000375128 CERKQ8TCT0 537 aa31.19■■■□□ 2.58
XPA-201ENST00000375128 TIMELESSQ9UNS1 1208 aa31.19■■■□□ 2.58
XPA-201ENST00000375128 NKTRP30414 1462 aaKnown RBP31.18■■■□□ 2.58
XPA-201ENST00000375128 XRN1Q8IZH2 1706 aaKnown RBP31.18■■■□□ 2.58
XPA-201ENST00000375128 LRRC7Q96NW7 1537 aa31.17■■■□□ 2.58
XPA-201ENST00000375128 RBM33Q96EV2 1170 aaKnown RBP31.16■■■□□ 2.58
XPA-201ENST00000375128 KIAA1210Q9ULL0 1709 aa31.16■■■□□ 2.58
XPA-201ENST00000375128 NBPF8Q3BBV2 869 aa31.15■■■□□ 2.58
XPA-201ENST00000375128 YTHDC2Q9H6S0 1430 aaKnown RBP31.14■■■□□ 2.58
XPA-201ENST00000375128 LRPPRCP42704 1394 aaKnown RBP31.14■■■□□ 2.58
XPA-201ENST00000375128 NBPF1Q3BBV0 1214 aa31.13■■■□□ 2.57
XPA-201ENST00000375128 ADGRB1O14514 1584 aa31.12■■■□□ 2.57
XPA-201ENST00000375128 TMEM94Q12767 1356 aa31.12■■■□□ 2.57
XPA-201ENST00000375128 TRPM1Q7Z4N2 1603 aa31.1■■■□□ 2.57
XPA-201ENST00000375128 ABCC11Q96J66 1382 aa31.09■■■□□ 2.57
XPA-201ENST00000375128 XIRP1Q702N8 1843 aaKnown RBP31.09■■■□□ 2.57
XPA-201ENST00000375128 ROBO2Q9HCK4 1378 aa31.08■■■□□ 2.57
XPA-201ENST00000375128 C14orf37Q86TY3 774 aa31.07■■■□□ 2.57
XPA-201ENST00000375128 TRAK1Q9UPV9 953 aa31.07■■■□□ 2.57
XPA-201ENST00000375128 KNDC1Q76NI1 1749 aa31.07■■■□□ 2.56
XPA-201ENST00000375128 PTCH1Q13635 1447 aa31.06■■■□□ 2.56
XPA-201ENST00000375128 ROCK2O75116 1388 aaKnown RBP31.05■■■□□ 2.56
XPA-201ENST00000375128 TECPR2O15040 1411 aa31.05■■■□□ 2.56
XPA-201ENST00000375128 IQSEC2Q5JU85 1478 aa31.04■■■□□ 2.56
XPA-201ENST00000375128 WAPLQ7Z5K2 1190 aa31.02■■■□□ 2.56
XPA-201ENST00000375128 NCOA3Q9Y6Q9 1424 aa31■■■□□ 2.55
XPA-201ENST00000375128 SIRT1Q96EB6 747 aa30.99■■■□□ 2.55
XPA-201ENST00000375128 POGKQ9P215 609 aa30.98■■■□□ 2.55
XPA-201ENST00000375128 RALGAPBQ86X10 1494 aa30.98■■■□□ 2.55
XPA-201ENST00000375128 MSH6P52701 1360 aa30.98■■■□□ 2.55
XPA-201ENST00000375128 DLC1Q96QB1 1528 aa30.98■■■□□ 2.55
XPA-201ENST00000375128 PRAM1Q96QH2 718 aa30.98■■■□□ 2.55
XPA-201ENST00000375128 PLEKHH1Q9ULM0 1364 aa30.97■■■□□ 2.55
XPA-201ENST00000375128 FAM135BQ49AJ0 1406 aa30.97■■■□□ 2.55
XPA-201ENST00000375128 SAFB2Q14151 953 aaKnown RBP eCLIP30.96■■■□□ 2.55
XPA-201ENST00000375128 CARD11Q9BXL7 1154 aa30.96■■■□□ 2.55
XPA-201ENST00000375128 C19orf44Q9H6X5 657 aa30.95■■■□□ 2.54
XPA-201ENST00000375128 ARHGEF28Q8N1W1 1705 aaKnown RBP30.94■■■□□ 2.54
XPA-201ENST00000375128 UBAP1LF5GYI3 381 aa30.92■■■□□ 2.54
XPA-201ENST00000375128 GPRASP1Q5JY77 1395 aa30.92■■■□□ 2.54
XPA-201ENST00000375128 NALCNQ8IZF0 1738 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms