RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 MAP3K1Q13233 1512 aa10.27□□□□□ -0.77
USP48-203ENST00000374732 DIEXFQ68CQ4 756 aaKnown RBP10.27□□□□□ -0.77
USP48-203ENST00000374732 ARHGAP35Q9NRY4 1499 aa10.27□□□□□ -0.77
USP48-203ENST00000374732 NME8Q8N427 588 aa10.26□□□□□ -0.77
USP48-203ENST00000374732 MYH16Q9H6N6 1097 aa10.25□□□□□ -0.77
USP48-203ENST00000374732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.25□□□□□ -0.77
USP48-203ENST00000374732 ARID4AP29374 1257 aaPredicted RBP10.25□□□□□ -0.77
USP48-203ENST00000374732 TPD52L2O43399 206 aaKnown RBP10.24□□□□□ -0.77
USP48-203ENST00000374732 DNAJC14Q6Y2X3 702 aaPredicted RBP10.24□□□□□ -0.77
USP48-203ENST00000374732 PPME1Q9Y570 386 aa10.24□□□□□ -0.77
USP48-203ENST00000374732 CTTNBP2Q8WZ74 1663 aa10.24□□□□□ -0.77
USP48-203ENST00000374732 CASC1Q6TDU7 716 aa10.23□□□□□ -0.77
USP48-203ENST00000374732 ZBTB12Q9Y330 459 aaPredicted RBP10.23□□□□□ -0.77
USP48-203ENST00000374732 CCER2I3L3R5 266 aa10.23□□□□□ -0.77
USP48-203ENST00000374732 ZNF513Q8N8E2 541 aaPredicted RBP10.23□□□□□ -0.77
USP48-203ENST00000374732 ZHX1Q9UKY1 873 aaPredicted RBP10.23□□□□□ -0.77
USP48-203ENST00000374732 PEX14O75381 377 aa10.22□□□□□ -0.77
USP48-203ENST00000374732 CENPJQ9HC77 1338 aaPredicted RBP10.22□□□□□ -0.77
USP48-203ENST00000374732 ARAP3Q8WWN8 1544 aa10.22□□□□□ -0.77
USP48-203ENST00000374732 CFAP74Q9C0B2 1584 aa10.22□□□□□ -0.77
USP48-203ENST00000374732 KIAA0556O60303 1618 aa10.22□□□□□ -0.77
USP48-203ENST00000374732 MYBPC2Q14324 1141 aa10.21□□□□□ -0.77
USP48-203ENST00000374732 RPS6KL1Q9Y6S9 549 aa10.21□□□□□ -0.78
USP48-203ENST00000374732 FAM43AQ8N2R8 423 aa10.2□□□□□ -0.78
USP48-203ENST00000374732 ABCA8O94911 1581 aa10.2□□□□□ -0.78
USP48-203ENST00000374732 RRBP1Q9P2E9 1410 aaKnown RBP10.2□□□□□ -0.78
USP48-203ENST00000374732 TESPA1A2RU30 521 aaPredicted RBP10.2□□□□□ -0.78
USP48-203ENST00000374732 FOSBP53539 338 aa10.2□□□□□ -0.78
USP48-203ENST00000374732 DNTTIP2Q5QJE6 756 aaKnown RBP10.2□□□□□ -0.78
USP48-203ENST00000374732 CEP120Q8N960 986 aa10.2□□□□□ -0.78
USP48-203ENST00000374732 ZNF500O60304 480 aaPredicted RBP10.19□□□□□ -0.78
USP48-203ENST00000374732 PRR29P0C7W0 189 aa10.19□□□□□ -0.78
USP48-203ENST00000374732 OTUD6BQ8N6M0 293 aa10.19□□□□□ -0.78
USP48-203ENST00000374732 EFCAB5A4FU69 1503 aa10.19□□□□□ -0.78
USP48-203ENST00000374732 EPRSP07814 1512 aaKnown RBP10.19□□□□□ -0.78
USP48-203ENST00000374732 ZCCHC11Q5TAX3 1644 aaKnown RBP10.19□□□□□ -0.78
USP48-203ENST00000374732 DHX16O60231 1041 aaKnown RBP10.18□□□□□ -0.78
USP48-203ENST00000374732 ATL2Q8NHH9 583 aa10.18□□□□□ -0.78
USP48-203ENST00000374732 JPH4Q96JJ6 628 aa10.18□□□□□ -0.78
USP48-203ENST00000374732 SUGT1Q9Y2Z0 365 aa10.18□□□□□ -0.78
USP48-203ENST00000374732 UACAQ9BZF9 1416 aa10.18□□□□□ -0.78
USP48-203ENST00000374732 KAT6BQ8WYB5 2073 aa10.18□□□□□ -0.78
USP48-203ENST00000374732 TCERG1O14776 1098 aaKnown RBP10.18□□□□□ -0.78
USP48-203ENST00000374732 SSFA2P28290 1259 aa10.18□□□□□ -0.78
USP48-203ENST00000374732 CHMP4CQ96CF2 233 aa10.18□□□□□ -0.78
USP48-203ENST00000374732 TRIM44Q96DX7 344 aaPredicted RBP10.18□□□□□ -0.78
USP48-203ENST00000374732 RALBP1Q15311 655 aa10.17□□□□□ -0.78
USP48-203ENST00000374732 HSP90AB3PQ58FF7 597 aa10.17□□□□□ -0.78
USP48-203ENST00000374732 GORABQ5T7V8 394 aa10.17□□□□□ -0.78
USP48-203ENST00000374732 FBXW7Q969H0 707 aa10.17□□□□□ -0.78
USP48-203ENST00000374732 DISP1Q96F81 1524 aa10.17□□□□□ -0.78
USP48-203ENST00000374732 TIAM1Q13009 1591 aa10.16□□□□□ -0.78
USP48-203ENST00000374732 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
USP48-203ENST00000374732 ABCA9Q8IUA7 1624 aa10.16□□□□□ -0.78
USP48-203ENST00000374732 NBPF9Q3BBW0 867 aa10.15□□□□□ -0.78
USP48-203ENST00000374732 PPP4R3BQ5MIZ7 849 aa10.15□□□□□ -0.78
USP48-203ENST00000374732 GET4Q7L5D6 327 aaPredicted RBP10.15□□□□□ -0.78
USP48-203ENST00000374732 MTA3Q9BTC8 594 aa10.15□□□□□ -0.78
USP48-203ENST00000374732 STK26Q9P289 416 aa10.15□□□□□ -0.78
USP48-203ENST00000374732 EP400NLQ6ZTU2 488 aa10.15□□□□□ -0.78
USP48-203ENST00000374732 CREBRFQ8IUR6 639 aa10.15□□□□□ -0.79
USP48-203ENST00000374732 PDCL3Q9H2J4 239 aa10.15□□□□□ -0.79
USP48-203ENST00000374732 MKRN3Q13064 507 aaKnown RBP10.14□□□□□ -0.79
USP48-203ENST00000374732 GOLGA6CA6NDK9 693 aa10.14□□□□□ -0.79
USP48-203ENST00000374732 GOLGA6BA6NDN3 693 aa10.14□□□□□ -0.79
USP48-203ENST00000374732 GOLGA6DP0CG33 693 aa10.14□□□□□ -0.79
USP48-203ENST00000374732 KANK4Q5T7N3 995 aaPredicted RBP10.14□□□□□ -0.79
USP48-203ENST00000374732 ANKRD13AQ8IZ07 590 aa10.14□□□□□ -0.79
USP48-203ENST00000374732 SIRT1Q96EB6 747 aa10.14□□□□□ -0.79
USP48-203ENST00000374732 GOLGA6AQ9NYA3 693 aa10.14□□□□□ -0.79
USP48-203ENST00000374732 PNMA2Q9UL42 364 aa10.14□□□□□ -0.79
USP48-203ENST00000374732 NEO1Q92859 1461 aa10.14□□□□□ -0.79
USP48-203ENST00000374732 GOLIM4O00461 696 aa10.13□□□□□ -0.79
USP48-203ENST00000374732 IRF5Q13568 498 aa10.13□□□□□ -0.79
USP48-203ENST00000374732 ZNF662Q6ZS27 426 aa10.13□□□□□ -0.79
USP48-203ENST00000374732 TRAIPQ9BWF2 469 aa10.13□□□□□ -0.79
USP48-203ENST00000374732 PTPRGP23470 1445 aa10.13□□□□□ -0.79
USP48-203ENST00000374732 WDR7Q9Y4E6 1490 aa10.13□□□□□ -0.79
USP48-203ENST00000374732 KIF4AO95239 1232 aa10.13□□□□□ -0.79
USP48-203ENST00000374732 RHBDL3P58872 404 aa10.13□□□□□ -0.79
USP48-203ENST00000374732 MICAL1Q8TDZ2 1067 aa10.13□□□□□ -0.79
USP48-203ENST00000374732 CT47B1P0C2W7 299 aaPredicted RBP10.12□□□□□ -0.79
USP48-203ENST00000374732 SLC24A3Q9HC58 644 aa10.12□□□□□ -0.79
USP48-203ENST00000374732 ZMYM4Q5VZL5 1548 aa10.12□□□□□ -0.79
USP48-203ENST00000374732 SCP2P22307 547 aa10.12□□□□□ -0.79
USP48-203ENST00000374732 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
USP48-203ENST00000374732 ADAMTSL3P82987 1691 aa10.12□□□□□ -0.79
USP48-203ENST00000374732 SAMD9Q5K651 1589 aa10.12□□□□□ -0.79
USP48-203ENST00000374732 ASXL2Q76L83 1435 aa10.11□□□□□ -0.79
USP48-203ENST00000374732 FYCO1Q9BQS8 1478 aa10.11□□□□□ -0.79
USP48-203ENST00000374732 UNCXA6NJT0 531 aa10.11□□□□□ -0.79
USP48-203ENST00000374732 LMOD2Q6P5Q4 547 aa10.11□□□□□ -0.79
USP48-203ENST00000374732 ERBB3P21860 1342 aa10.11□□□□□ -0.79
USP48-203ENST00000374732 LRRC9Q6ZRR7 1453 aa10.11□□□□□ -0.79
USP48-203ENST00000374732 RGL2O15211 777 aa10.11□□□□□ -0.79
USP48-203ENST00000374732 HNRNPUL2Q1KMD3 747 aaKnown RBP10.11□□□□□ -0.79
USP48-203ENST00000374732 ARHGEF1Q92888 912 aaKnown RBP10.11□□□□□ -0.79
USP48-203ENST00000374732 DDRGK1Q96HY6 314 aa10.11□□□□□ -0.79
USP48-203ENST00000374732 WASHC2CQ9Y4E1 1318 aa10.11□□□□□ -0.79
USP48-203ENST00000374732 PPFIA4O75335 1185 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms