RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 SLIT1O75093 1534 aa22.16■■□□□ 1.14
PFDN6-203ENST00000374610 SCAF11Q99590 1463 aaKnown RBP22.15■■□□□ 1.14
PFDN6-203ENST00000374610 POLR1AO95602 1720 aaPredicted RBP22.14■■□□□ 1.14
PFDN6-203ENST00000374610 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
PFDN6-203ENST00000374610 STRCQ7RTU9 1775 aa22.14■■□□□ 1.13
PFDN6-203ENST00000374610 LTKP29376 864 aa22.13■■□□□ 1.13
PFDN6-203ENST00000374610 ARHGAP23Q9P227 1491 aa22.13■■□□□ 1.13
PFDN6-203ENST00000374610 RPGRIP1LQ68CZ1 1315 aa22.11■■□□□ 1.13
PFDN6-203ENST00000374610 NEUROD1Q13562 356 aa22.11■■□□□ 1.13
PFDN6-203ENST00000374610 NPHP4O75161 1426 aaPredicted RBP22.11■■□□□ 1.13
PFDN6-203ENST00000374610 VGFO15240 615 aaPredicted RBP22.09■■□□□ 1.13
PFDN6-203ENST00000374610 ZFYVE9O95405 1425 aa22.07■■□□□ 1.12
PFDN6-203ENST00000374610 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
PFDN6-203ENST00000374610 IQGAP1P46940 1657 aa22.05■■□□□ 1.12
PFDN6-203ENST00000374610 MED14O60244 1454 aa22.05■■□□□ 1.12
PFDN6-203ENST00000374610 SIN3AQ96ST3 1273 aa22.05■■□□□ 1.12
PFDN6-203ENST00000374610 SPATA31E1Q6ZUB1 1445 aa22.05■■□□□ 1.12
PFDN6-203ENST00000374610 NEURL4Q96JN8 1562 aa22.04■■□□□ 1.12
PFDN6-203ENST00000374610 PLEKHG1Q9ULL1 1385 aa22.03■■□□□ 1.12
PFDN6-203ENST00000374610 NEXMIFQ5QGS0 1516 aa22.03■■□□□ 1.12
PFDN6-203ENST00000374610 KDM2AQ9Y2K7 1162 aa22.03■■□□□ 1.12
PFDN6-203ENST00000374610 SLC26A8Q96RN1 970 aa22.02■■□□□ 1.12
PFDN6-203ENST00000374610 DCAF11Q8TEB1 546 aa22.01■■□□□ 1.11
PFDN6-203ENST00000374610 PPLO60437 1756 aa21.99■■□□□ 1.11
PFDN6-203ENST00000374610 STAC3Q96MF2 364 aa21.95■■□□□ 1.1
PFDN6-203ENST00000374610 ADGRF5Q8IZF2 1346 aa21.95■■□□□ 1.1
PFDN6-203ENST00000374610 TONSLQ96HA7 1378 aa21.95■■□□□ 1.1
PFDN6-203ENST00000374610 TBX22Q9Y458 520 aa21.94■■□□□ 1.1
PFDN6-203ENST00000374610 CLSPNQ9HAW4 1339 aa21.94■■□□□ 1.1
PFDN6-203ENST00000374610 ZNF335Q9H4Z2 1342 aaPredicted RBP21.93■■□□□ 1.1
PFDN6-203ENST00000374610 IFT172Q9UG01 1749 aa21.92■■□□□ 1.1
PFDN6-203ENST00000374610 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
PFDN6-203ENST00000374610 L3MBTL2Q969R5 705 aa21.9■■□□□ 1.1
PFDN6-203ENST00000374610 SETBP1Q9Y6X0 1596 aa21.9■■□□□ 1.1
PFDN6-203ENST00000374610 MYOM2P54296 1465 aa21.9■■□□□ 1.1
PFDN6-203ENST00000374610 ADAMTS13Q76LX8 1427 aa21.88■■□□□ 1.09
PFDN6-203ENST00000374610 KCNA6P17658 529 aa21.86■■□□□ 1.09
PFDN6-203ENST00000374610 PIK3C2GO75747 1445 aa21.85■■□□□ 1.09
PFDN6-203ENST00000374610 ALKQ9UM73 1620 aa21.84■■□□□ 1.09
PFDN6-203ENST00000374610 NRXN3Q9Y4C0 1643 aa21.84■■□□□ 1.09
PFDN6-203ENST00000374610 PIK3R4Q99570 1358 aa21.84■■□□□ 1.09
PFDN6-203ENST00000374610 CFAP70Q5T0N1 1121 aa21.83■■□□□ 1.09
PFDN6-203ENST00000374610 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.09
PFDN6-203ENST00000374610 PROSER2Q86WR7 435 aaPredicted RBP21.82■■□□□ 1.08
PFDN6-203ENST00000374610 C14orf93Q9H972 538 aaKnown RBP21.82■■□□□ 1.08
PFDN6-203ENST00000374610 METP08581 1390 aa21.82■■□□□ 1.08
PFDN6-203ENST00000374610 CPS1P31327 1500 aa21.81■■□□□ 1.08
PFDN6-203ENST00000374610 NRXN1Q9ULB1 1477 aa21.81■■□□□ 1.08
PFDN6-203ENST00000374610 TMEM132EQ6IEE7 984 aa21.8■■□□□ 1.08
PFDN6-203ENST00000374610 STK26Q9P289 416 aa21.8■■□□□ 1.08
PFDN6-203ENST00000374610 LAMC1P11047 1609 aa21.79■■□□□ 1.08
PFDN6-203ENST00000374610 C14orf37Q86TY3 774 aa21.78■■□□□ 1.08
PFDN6-203ENST00000374610 CERKQ8TCT0 537 aa21.78■■□□□ 1.08
PFDN6-203ENST00000374610 CHD2O14647 1828 aaKnown RBP21.78■■□□□ 1.08
PFDN6-203ENST00000374610 TIMELESSQ9UNS1 1208 aa21.77■■□□□ 1.08
PFDN6-203ENST00000374610 LTBP4Q8N2S1 1624 aa21.77■■□□□ 1.07
PFDN6-203ENST00000374610 PRAG1Q86YV5 1406 aa21.76■■□□□ 1.07
PFDN6-203ENST00000374610 NKTRP30414 1462 aaKnown RBP21.75■■□□□ 1.07
PFDN6-203ENST00000374610 NWD1Q149M9 1564 aa21.74■■□□□ 1.07
PFDN6-203ENST00000374610 STRCP1A6NGW2 1772 aa21.74■■□□□ 1.07
PFDN6-203ENST00000374610 PTPRUQ92729 1446 aa21.74■■□□□ 1.07
PFDN6-203ENST00000374610 SETD1AO15047 1707 aaKnown RBP21.73■■□□□ 1.07
PFDN6-203ENST00000374610 RBM33Q96EV2 1170 aaKnown RBP21.73■■□□□ 1.07
PFDN6-203ENST00000374610 LRRC7Q96NW7 1537 aa21.71■■□□□ 1.07
PFDN6-203ENST00000374610 YTHDC2Q9H6S0 1430 aaKnown RBP21.71■■□□□ 1.07
PFDN6-203ENST00000374610 LRPPRCP42704 1394 aaKnown RBP21.7■■□□□ 1.06
PFDN6-203ENST00000374610 TMEM94Q12767 1356 aa21.7■■□□□ 1.06
PFDN6-203ENST00000374610 TRAK1Q9UPV9 953 aa21.69■■□□□ 1.06
PFDN6-203ENST00000374610 ROCK2O75116 1388 aaKnown RBP21.69■■□□□ 1.06
PFDN6-203ENST00000374610 POGKQ9P215 609 aa21.68■■□□□ 1.06
PFDN6-203ENST00000374610 XRN1Q8IZH2 1706 aaKnown RBP21.68■■□□□ 1.06
PFDN6-203ENST00000374610 KIAA1210Q9ULL0 1709 aa21.68■■□□□ 1.06
PFDN6-203ENST00000374610 NBPF1Q3BBV0 1214 aa21.67■■□□□ 1.06
PFDN6-203ENST00000374610 NBPF8Q3BBV2 869 aa21.67■■□□□ 1.06
PFDN6-203ENST00000374610 ASXL1Q8IXJ9 1541 aa21.66■■□□□ 1.06
PFDN6-203ENST00000374610 MSH6P52701 1360 aa21.66■■□□□ 1.06
PFDN6-203ENST00000374610 ABCC11Q96J66 1382 aa21.66■■□□□ 1.06
PFDN6-203ENST00000374610 IQSEC2Q5JU85 1478 aa21.64■■□□□ 1.06
PFDN6-203ENST00000374610 PTCH1Q13635 1447 aa21.64■■□□□ 1.06
PFDN6-203ENST00000374610 ROBO2Q9HCK4 1378 aa21.64■■□□□ 1.06
PFDN6-203ENST00000374610 TRPM1Q7Z4N2 1603 aa21.63■■□□□ 1.05
PFDN6-203ENST00000374610 ADGRB1O14514 1584 aa21.63■■□□□ 1.05
PFDN6-203ENST00000374610 UBAP1LF5GYI3 381 aa21.63■■□□□ 1.05
PFDN6-203ENST00000374610 SAFB2Q14151 953 aaKnown RBP eCLIP21.63■■□□□ 1.05
PFDN6-203ENST00000374610 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
PFDN6-203ENST00000374610 NCOA3Q9Y6Q9 1424 aa21.63■■□□□ 1.05
PFDN6-203ENST00000374610 TOM1O60784 492 aa21.62■■□□□ 1.05
PFDN6-203ENST00000374610 ATF3P18847 181 aa21.62■■□□□ 1.05
PFDN6-203ENST00000374610 PRAM1Q96QH2 718 aa21.62■■□□□ 1.05
PFDN6-203ENST00000374610 CARD11Q9BXL7 1154 aa21.62■■□□□ 1.05
PFDN6-203ENST00000374610 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
PFDN6-203ENST00000374610 KNDC1Q76NI1 1749 aa21.61■■□□□ 1.05
PFDN6-203ENST00000374610 C19orf44Q9H6X5 657 aa21.61■■□□□ 1.05
PFDN6-203ENST00000374610 TECPR2O15040 1411 aa21.61■■□□□ 1.05
PFDN6-203ENST00000374610 SIRT1Q96EB6 747 aa21.6■■□□□ 1.05
PFDN6-203ENST00000374610 FAM135BQ49AJ0 1406 aa21.58■■□□□ 1.05
PFDN6-203ENST00000374610 XIRP1Q702N8 1843 aaKnown RBP21.57■■□□□ 1.04
PFDN6-203ENST00000374610 DLC1Q96QB1 1528 aa21.57■■□□□ 1.04
PFDN6-203ENST00000374610 CADPS2Q86UW7 1296 aa21.57■■□□□ 1.04
PFDN6-203ENST00000374610 EIF3AQ14152 1382 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms