RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 MYOM2P54296 1465 aa21■□□□□ 0.95
SMPDL3B-201ENST00000373888 PPLO60437 1756 aa21■□□□□ 0.95
SMPDL3B-201ENST00000373888 KDM2AQ9Y2K7 1162 aa20.97■□□□□ 0.95
SMPDL3B-201ENST00000373888 PRAG1Q86YV5 1406 aa20.96■□□□□ 0.95
SMPDL3B-201ENST00000373888 NRXN1Q9ULB1 1477 aa20.96■□□□□ 0.95
SMPDL3B-201ENST00000373888 TMEM2Q9UHN6 1383 aa20.96■□□□□ 0.95
SMPDL3B-201ENST00000373888 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
SMPDL3B-201ENST00000373888 RIMS2Q9UQ26 1411 aa20.95■□□□□ 0.94
SMPDL3B-201ENST00000373888 SLIT1O75093 1534 aa20.94■□□□□ 0.94
SMPDL3B-201ENST00000373888 ARHGAP23Q9P227 1491 aa20.94■□□□□ 0.94
SMPDL3B-201ENST00000373888 NBPF8Q3BBV2 869 aa20.94■□□□□ 0.94
SMPDL3B-201ENST00000373888 THEMISQ8N1K5 641 aaPredicted RBP20.94■□□□□ 0.94
SMPDL3B-201ENST00000373888 VGFO15240 615 aaPredicted RBP20.92■□□□□ 0.94
SMPDL3B-201ENST00000373888 ADGRF5Q8IZF2 1346 aa20.91■□□□□ 0.94
SMPDL3B-201ENST00000373888 PELP1Q8IZL8 1130 aaKnown RBP20.9■□□□□ 0.94
SMPDL3B-201ENST00000373888 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.9■□□□□ 0.94
SMPDL3B-201ENST00000373888 PIK3C2GO75747 1445 aa20.9■□□□□ 0.94
SMPDL3B-201ENST00000373888 HDGFP51858 240 aaKnown RBP20.89■□□□□ 0.94
SMPDL3B-201ENST00000373888 RALGAPBQ86X10 1494 aa20.88■□□□□ 0.93
SMPDL3B-201ENST00000373888 MYT1Q01538 1121 aa20.88■□□□□ 0.93
SMPDL3B-201ENST00000373888 TRPM1Q7Z4N2 1603 aa20.87■□□□□ 0.93
SMPDL3B-201ENST00000373888 NUTM2DQ5VT03 806 aaPredicted RBP20.87■□□□□ 0.93
SMPDL3B-201ENST00000373888 KIAA1210Q9ULL0 1709 aa20.85■□□□□ 0.93
SMPDL3B-201ENST00000373888 LTKP29376 864 aa20.83■□□□□ 0.93
SMPDL3B-201ENST00000373888 EID1Q9Y6B2 187 aa20.83■□□□□ 0.93
SMPDL3B-201ENST00000373888 LMTK3Q96Q04 1460 aa20.83■□□□□ 0.92
SMPDL3B-201ENST00000373888 SCAF11Q99590 1463 aaKnown RBP20.83■□□□□ 0.92
SMPDL3B-201ENST00000373888 SETBP1Q9Y6X0 1596 aa20.82■□□□□ 0.92
SMPDL3B-201ENST00000373888 TXNDC2Q86VQ3 553 aa20.82■□□□□ 0.92
SMPDL3B-201ENST00000373888 GPRASP1Q5JY77 1395 aa20.82■□□□□ 0.92
SMPDL3B-201ENST00000373888 PLEKHG1Q9ULL1 1385 aa20.82■□□□□ 0.92
SMPDL3B-201ENST00000373888 LAMC1P11047 1609 aa20.81■□□□□ 0.92
SMPDL3B-201ENST00000373888 C14orf93Q9H972 538 aaKnown RBP20.81■□□□□ 0.92
SMPDL3B-201ENST00000373888 ROCK2O75116 1388 aaKnown RBP20.8■□□□□ 0.92
SMPDL3B-201ENST00000373888 NRXN3Q9Y4C0 1643 aa20.79■□□□□ 0.92
SMPDL3B-201ENST00000373888 CFAP70Q5T0N1 1121 aa20.79■□□□□ 0.92
SMPDL3B-201ENST00000373888 ANKLE2Q86XL3 938 aa20.78■□□□□ 0.92
SMPDL3B-201ENST00000373888 NBPF1Q3BBV0 1214 aa20.78■□□□□ 0.92
SMPDL3B-201ENST00000373888 ALKQ9UM73 1620 aa20.77■□□□□ 0.92
SMPDL3B-201ENST00000373888 IQGAP1P46940 1657 aa20.77■□□□□ 0.91
SMPDL3B-201ENST00000373888 ADGRB1O14514 1584 aa20.76■□□□□ 0.91
SMPDL3B-201ENST00000373888 SETD1AO15047 1707 aaKnown RBP20.75■□□□□ 0.91
SMPDL3B-201ENST00000373888 POLR1AO95602 1720 aaPredicted RBP20.75■□□□□ 0.91
SMPDL3B-201ENST00000373888 ADAMTS13Q76LX8 1427 aa20.74■□□□□ 0.91
SMPDL3B-201ENST00000373888 CARD11Q9BXL7 1154 aa20.74■□□□□ 0.91
SMPDL3B-201ENST00000373888 MED14O60244 1454 aa20.74■□□□□ 0.91
SMPDL3B-201ENST00000373888 ASXL1Q8IXJ9 1541 aa20.73■□□□□ 0.91
SMPDL3B-201ENST00000373888 DIP2AQ14689 1571 aa20.72■□□□□ 0.91
SMPDL3B-201ENST00000373888 HSPA2P54652 639 aa20.7■□□□□ 0.9
SMPDL3B-201ENST00000373888 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
SMPDL3B-201ENST00000373888 NPHP4O75161 1426 aaPredicted RBP20.7■□□□□ 0.9
SMPDL3B-201ENST00000373888 BCANQ96GW7 911 aa20.69■□□□□ 0.9
SMPDL3B-201ENST00000373888 USP47Q96K76 1375 aa20.69■□□□□ 0.9
SMPDL3B-201ENST00000373888 NCKAP5LQ9HCH0 1330 aa20.68■□□□□ 0.9
SMPDL3B-201ENST00000373888 EIF4G2P78344 907 aaKnown RBP eCLIP20.68■□□□□ 0.9
SMPDL3B-201ENST00000373888 TMEM132EQ6IEE7 984 aa20.68■□□□□ 0.9
SMPDL3B-201ENST00000373888 TBX22Q9Y458 520 aa20.68■□□□□ 0.9
SMPDL3B-201ENST00000373888 METP08581 1390 aa20.67■□□□□ 0.9
SMPDL3B-201ENST00000373888 YTHDC2Q9H6S0 1430 aaKnown RBP20.65■□□□□ 0.9
SMPDL3B-201ENST00000373888 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
SMPDL3B-201ENST00000373888 HSPA5P11021 654 aaKnown RBP20.64■□□□□ 0.9
SMPDL3B-201ENST00000373888 STRCQ7RTU9 1775 aa20.64■□□□□ 0.89
SMPDL3B-201ENST00000373888 LRPPRCP42704 1394 aaKnown RBP20.63■□□□□ 0.89
SMPDL3B-201ENST00000373888 EIF3AQ14152 1382 aaKnown RBP20.63■□□□□ 0.89
SMPDL3B-201ENST00000373888 PIK3R4Q99570 1358 aa20.62■□□□□ 0.89
SMPDL3B-201ENST00000373888 TECPR2O15040 1411 aa20.61■□□□□ 0.89
SMPDL3B-201ENST00000373888 ABCC11Q96J66 1382 aa20.61■□□□□ 0.89
SMPDL3B-201ENST00000373888 DLC1Q96QB1 1528 aa20.6■□□□□ 0.89
SMPDL3B-201ENST00000373888 KNDC1Q76NI1 1749 aa20.6■□□□□ 0.89
SMPDL3B-201ENST00000373888 ARHGEF28Q8N1W1 1705 aaKnown RBP20.6■□□□□ 0.89
SMPDL3B-201ENST00000373888 TRAK1Q9UPV9 953 aa20.59■□□□□ 0.89
SMPDL3B-201ENST00000373888 PTPRUQ92729 1446 aa20.59■□□□□ 0.89
SMPDL3B-201ENST00000373888 ST20-MTHFSA0A0A6YYL1 179 aa20.58■□□□□ 0.89
SMPDL3B-201ENST00000373888 CPS1P31327 1500 aa20.57■□□□□ 0.88
SMPDL3B-201ENST00000373888 HIRIP3Q9BW71 556 aaPredicted RBP20.57■□□□□ 0.88
SMPDL3B-201ENST00000373888 STK26Q9P289 416 aa20.57■□□□□ 0.88
SMPDL3B-201ENST00000373888 XRN1Q8IZH2 1706 aaKnown RBP20.57■□□□□ 0.88
SMPDL3B-201ENST00000373888 ZNF316A6NFI3 1004 aaPredicted RBP20.55■□□□□ 0.88
SMPDL3B-201ENST00000373888 CHD2O14647 1828 aaKnown RBP20.54■□□□□ 0.88
SMPDL3B-201ENST00000373888 SIRT1Q96EB6 747 aa20.54■□□□□ 0.88
SMPDL3B-201ENST00000373888 FAM135BQ49AJ0 1406 aa20.54■□□□□ 0.88
SMPDL3B-201ENST00000373888 CENPJQ9HC77 1338 aaPredicted RBP20.54■□□□□ 0.88
SMPDL3B-201ENST00000373888 PTCH1Q13635 1447 aa20.53■□□□□ 0.88
SMPDL3B-201ENST00000373888 TESK2Q96S53 571 aa20.53■□□□□ 0.88
SMPDL3B-201ENST00000373888 AMOTL2Q9Y2J4 779 aa20.53■□□□□ 0.88
SMPDL3B-201ENST00000373888 SBNO2Q9Y2G9 1366 aa20.53■□□□□ 0.88
SMPDL3B-201ENST00000373888 NWD1Q149M9 1564 aa20.53■□□□□ 0.88
SMPDL3B-201ENST00000373888 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.87
SMPDL3B-201ENST00000373888 PRAM1Q96QH2 718 aa20.51■□□□□ 0.87
SMPDL3B-201ENST00000373888 ROBO2Q9HCK4 1378 aa20.51■□□□□ 0.87
SMPDL3B-201ENST00000373888 QRICH2Q9H0J4 1663 aa20.51■□□□□ 0.87
SMPDL3B-201ENST00000373888 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
SMPDL3B-201ENST00000373888 KCNA6P17658 529 aa20.49■□□□□ 0.87
SMPDL3B-201ENST00000373888 POGKQ9P215 609 aa20.48■□□□□ 0.87
SMPDL3B-201ENST00000373888 SLC24A1O60721 1099 aa20.48■□□□□ 0.87
SMPDL3B-201ENST00000373888 PLEKHH1Q9ULM0 1364 aa20.47■□□□□ 0.87
SMPDL3B-201ENST00000373888 WAPLQ7Z5K2 1190 aa20.47■□□□□ 0.87
SMPDL3B-201ENST00000373888 NKTRP30414 1462 aaKnown RBP20.46■□□□□ 0.87
SMPDL3B-201ENST00000373888 C11orf95C9JLR9 678 aaPredicted RBP20.44■□□□□ 0.86
SMPDL3B-201ENST00000373888 TMF1P82094 1093 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms