RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 BCANQ96GW7 911 aa20.27■□□□□ 0.84
TRAPPC3-201ENST00000373159 ADGRB3O60242 1522 aa20.25■□□□□ 0.83
TRAPPC3-201ENST00000373159 PLEKHG1Q9ULL1 1385 aa20.22■□□□□ 0.83
TRAPPC3-201ENST00000373159 ZFYVE9O95405 1425 aa20.22■□□□□ 0.83
TRAPPC3-201ENST00000373159 SLAIN2Q9P270 581 aa20.22■□□□□ 0.83
TRAPPC3-201ENST00000373159 NKTRP30414 1462 aaKnown RBP20.22■□□□□ 0.83
TRAPPC3-201ENST00000373159 PPP1R15AO75807 674 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC3-201ENST00000373159 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
TRAPPC3-201ENST00000373159 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.2■□□□□ 0.82
TRAPPC3-201ENST00000373159 MSH6P52701 1360 aa20.2■□□□□ 0.82
TRAPPC3-201ENST00000373159 RIMS2Q9UQ26 1411 aa20.19■□□□□ 0.82
TRAPPC3-201ENST00000373159 NWD1Q149M9 1564 aa20.18■□□□□ 0.82
TRAPPC3-201ENST00000373159 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
TRAPPC3-201ENST00000373159 POTEAQ6S8J7 498 aa20.15■□□□□ 0.82
TRAPPC3-201ENST00000373159 ROCK1Q13464 1354 aa20.15■□□□□ 0.82
TRAPPC3-201ENST00000373159 NCOA3Q9Y6Q9 1424 aa20.15■□□□□ 0.82
TRAPPC3-201ENST00000373159 ROBO1Q9Y6N7 1651 aa20.14■□□□□ 0.81
TRAPPC3-201ENST00000373159 TMEM131LA2VDJ0 1609 aa20.13■□□□□ 0.81
TRAPPC3-201ENST00000373159 PIK3R4Q99570 1358 aa20.1■□□□□ 0.81
TRAPPC3-201ENST00000373159 JCADQ9P266 1359 aa20.1■□□□□ 0.81
TRAPPC3-201ENST00000373159 NUTM2DQ5VT03 806 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC3-201ENST00000373159 C19orf44Q9H6X5 657 aa20.1■□□□□ 0.81
TRAPPC3-201ENST00000373159 ADAMTS13Q76LX8 1427 aa20.1■□□□□ 0.81
TRAPPC3-201ENST00000373159 CHD2O14647 1828 aaKnown RBP20.09■□□□□ 0.81
TRAPPC3-201ENST00000373159 UNC13BO14795 1591 aa20.09■□□□□ 0.81
TRAPPC3-201ENST00000373159 NUP155O75694 1391 aa20.08■□□□□ 0.81
TRAPPC3-201ENST00000373159 C14orf37Q86TY3 774 aa20.08■□□□□ 0.81
TRAPPC3-201ENST00000373159 CADPS2Q86UW7 1296 aa20.08■□□□□ 0.81
TRAPPC3-201ENST00000373159 GCC2Q8IWJ2 1684 aa20.07■□□□□ 0.8
TRAPPC3-201ENST00000373159 MYO5BQ9ULV0 1848 aa20.06■□□□□ 0.8
TRAPPC3-201ENST00000373159 ATF3P18847 181 aa20.05■□□□□ 0.8
TRAPPC3-201ENST00000373159 AMOTL2Q9Y2J4 779 aa20.05■□□□□ 0.8
TRAPPC3-201ENST00000373159 E9PCH4 1651 aa20.03■□□□□ 0.8
TRAPPC3-201ENST00000373159 ITGAEP38570 1179 aa20.03■□□□□ 0.8
TRAPPC3-201ENST00000373159 IQGAP3Q86VI3 1631 aa20.02■□□□□ 0.8
TRAPPC3-201ENST00000373159 DIP2AQ14689 1571 aa20.02■□□□□ 0.8
TRAPPC3-201ENST00000373159 SPATA31A6Q5VVP1 1343 aa20.02■□□□□ 0.79
TRAPPC3-201ENST00000373159 PHLPP1O60346 1717 aa20.01■□□□□ 0.79
TRAPPC3-201ENST00000373159 PTPRUQ92729 1446 aa19.99■□□□□ 0.79
TRAPPC3-201ENST00000373159 BRINP3Q76B58 766 aa19.97■□□□□ 0.79
TRAPPC3-201ENST00000373159 COL16A1Q07092 1604 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC3-201ENST00000373159 TRPM2O94759 1503 aa19.97■□□□□ 0.79
TRAPPC3-201ENST00000373159 ZNF326Q5BKZ1 582 aaKnown RBP19.95■□□□□ 0.78
TRAPPC3-201ENST00000373159 ZNF772Q68DY9 489 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC3-201ENST00000373159 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC3-201ENST00000373159 MEX3CQ5U5Q3 659 aaKnown RBP19.94■□□□□ 0.78
TRAPPC3-201ENST00000373159 AHDC1Q5TGY3 1603 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC3-201ENST00000373159 DCCP43146 1447 aa19.93■□□□□ 0.78
TRAPPC3-201ENST00000373159 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
TRAPPC3-201ENST00000373159 LRP6O75581 1613 aa19.92■□□□□ 0.78
TRAPPC3-201ENST00000373159 METP08581 1390 aa19.92■□□□□ 0.78
TRAPPC3-201ENST00000373159 SETBP1Q9Y6X0 1596 aa19.9■□□□□ 0.78
TRAPPC3-201ENST00000373159 MST1RQ04912 1400 aa19.87■□□□□ 0.77
TRAPPC3-201ENST00000373159 LRRC59Q96AG4 307 aaKnown RBP19.87■□□□□ 0.77
TRAPPC3-201ENST00000373159 NRXN3Q9Y4C0 1643 aa19.87■□□□□ 0.77
TRAPPC3-201ENST00000373159 SETD5Q9C0A6 1442 aa19.86■□□□□ 0.77
TRAPPC3-201ENST00000373159 NUTM2BA6NNL0 878 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC3-201ENST00000373159 NUTM2EB1AL46 878 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC3-201ENST00000373159 NUTM2AQ8IVF1 878 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC3-201ENST00000373159 RXRBP28702 533 aa19.85■□□□□ 0.77
TRAPPC3-201ENST00000373159 XRN1Q8IZH2 1706 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-201ENST00000373159 SHPRHQ149N8 1683 aa19.84■□□□□ 0.77
TRAPPC3-201ENST00000373159 ASXL1Q8IXJ9 1541 aa19.83■□□□□ 0.77
TRAPPC3-201ENST00000373159 SPHKAPQ2M3C7 1700 aa19.83■□□□□ 0.77
TRAPPC3-201ENST00000373159 UPF1Q92900 1129 aaKnown RBP eCLIP19.83■□□□□ 0.77
TRAPPC3-201ENST00000373159 TRIM52Q96A61 297 aa19.83■□□□□ 0.77
TRAPPC3-201ENST00000373159 ADGRL3Q9HAR2 1447 aa19.83■□□□□ 0.76
TRAPPC3-201ENST00000373159 VGFO15240 615 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC3-201ENST00000373159 NAIPQ13075 1403 aa19.81■□□□□ 0.76
TRAPPC3-201ENST00000373159 RRBP1Q9P2E9 1410 aaKnown RBP19.81■□□□□ 0.76
TRAPPC3-201ENST00000373159 NEXMIFQ5QGS0 1516 aa19.8■□□□□ 0.76
TRAPPC3-201ENST00000373159 AFF2P51816 1311 aa19.79■□□□□ 0.76
TRAPPC3-201ENST00000373159 DDX17Q92841 729 aaKnown RBP19.79■□□□□ 0.76
TRAPPC3-201ENST00000373159 RPGRIP1LQ68CZ1 1315 aa19.78■□□□□ 0.76
TRAPPC3-201ENST00000373159 CLTCL1P53675 1640 aa19.78■□□□□ 0.76
TRAPPC3-201ENST00000373159 SETD1AO15047 1707 aaKnown RBP19.78■□□□□ 0.76
TRAPPC3-201ENST00000373159 PNPLA6Q8IY17 1366 aa19.77■□□□□ 0.76
TRAPPC3-201ENST00000373159 CDK12Q9NYV4 1490 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC3-201ENST00000373159 C1orf167Q5SNV9 1468 aa19.75■□□□□ 0.75
TRAPPC3-201ENST00000373159 ROBO2Q9HCK4 1378 aa19.74■□□□□ 0.75
TRAPPC3-201ENST00000373159 NHSL1Q5SYE7 1610 aa19.74■□□□□ 0.75
TRAPPC3-201ENST00000373159 C8orf37Q96NL8 207 aa19.74■□□□□ 0.75
TRAPPC3-201ENST00000373159 SLC4A1APQ9BWU0 796 aaKnown RBP19.74■□□□□ 0.75
TRAPPC3-201ENST00000373159 QTRT2Q9H974 415 aaKnown RBP19.74■□□□□ 0.75
TRAPPC3-201ENST00000373159 PTCH1Q13635 1447 aa19.74■□□□□ 0.75
TRAPPC3-201ENST00000373159 ORAI2Q96SN7 254 aa19.73■□□□□ 0.75
TRAPPC3-201ENST00000373159 SOS2Q07890 1332 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC3-201ENST00000373159 HFM1A2PYH4 1435 aa19.72■□□□□ 0.75
TRAPPC3-201ENST00000373159 RBM6P78332 1123 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-201ENST00000373159 PRAG1Q86YV5 1406 aa19.71■□□□□ 0.75
TRAPPC3-201ENST00000373159 KIF1BO60333 1816 aa19.7■□□□□ 0.74
TRAPPC3-201ENST00000373159 NGLY1Q96IV0 654 aa19.7■□□□□ 0.74
TRAPPC3-201ENST00000373159 NALCNQ8IZF0 1738 aa19.68■□□□□ 0.74
TRAPPC3-201ENST00000373159 ADAMTS2O95450 1211 aa19.68■□□□□ 0.74
TRAPPC3-201ENST00000373159 LAMC1P11047 1609 aa19.65■□□□□ 0.74
TRAPPC3-201ENST00000373159 FNBP4Q8N3X1 1017 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC3-201ENST00000373159 RGS12O14924 1447 aa19.63■□□□□ 0.73
TRAPPC3-201ENST00000373159 FOXD1Q16676 465 aa19.63■□□□□ 0.73
TRAPPC3-201ENST00000373159 USP21Q9UK80 565 aa19.63■□□□□ 0.73
TRAPPC3-201ENST00000373159 ADGRF5Q8IZF2 1346 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms