RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 SEC24BO95487 1268 aa17.71■□□□□ 0.43
USP49-201ENST00000373006 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
USP49-201ENST00000373006 CCDC141Q6ZP82 1450 aa17.7■□□□□ 0.42
USP49-201ENST00000373006 SLKQ9H2G2 1235 aaPredicted RBP17.69■□□□□ 0.42
USP49-201ENST00000373006 SYNJ2O15056 1496 aa17.69■□□□□ 0.42
USP49-201ENST00000373006 WDR7Q9Y4E6 1490 aa17.68■□□□□ 0.42
USP49-201ENST00000373006 POGKQ9P215 609 aa17.68■□□□□ 0.42
USP49-201ENST00000373006 USP19O94966 1318 aa17.67■□□□□ 0.42
USP49-201ENST00000373006 COG6Q9Y2V7 657 aa17.66■□□□□ 0.42
USP49-201ENST00000373006 ABCA8O94911 1581 aa17.66■□□□□ 0.42
USP49-201ENST00000373006 TRMT2AQ8IZ69 625 aaKnown RBP17.66■□□□□ 0.42
USP49-201ENST00000373006 PANK1Q8TE04 598 aa17.66■□□□□ 0.42
USP49-201ENST00000373006 CANXP27824 592 aaKnown RBP17.65■□□□□ 0.42
USP49-201ENST00000373006 RSPH4AQ5TD94 716 aa17.65■□□□□ 0.42
USP49-201ENST00000373006 ARHGEF5Q12774 1597 aa17.64■□□□□ 0.41
USP49-201ENST00000373006 SAMD9LQ8IVG5 1584 aa17.64■□□□□ 0.41
USP49-201ENST00000373006 NEUROD2Q15784 382 aa17.63■□□□□ 0.41
USP49-201ENST00000373006 PODXL2Q9NZ53 605 aa17.63■□□□□ 0.41
USP49-201ENST00000373006 NKTRP30414 1462 aaKnown RBP17.62■□□□□ 0.41
USP49-201ENST00000373006 NAP1L5Q96NT1 182 aaPredicted RBP17.62■□□□□ 0.41
USP49-201ENST00000373006 EIF3AQ14152 1382 aaKnown RBP17.62■□□□□ 0.41
USP49-201ENST00000373006 E9PSI1 815 aa17.61■□□□□ 0.41
USP49-201ENST00000373006 SYCP2Q9BX26 1530 aa17.61■□□□□ 0.41
USP49-201ENST00000373006 CLUAP1Q96AJ1 413 aa17.6■□□□□ 0.41
USP49-201ENST00000373006 CDCA8Q53HL2 280 aa17.6■□□□□ 0.41
USP49-201ENST00000373006 SPRYD3Q8NCJ5 442 aa17.59■□□□□ 0.41
USP49-201ENST00000373006 LAMC1P11047 1609 aa17.58■□□□□ 0.41
USP49-201ENST00000373006 MYO5CQ9NQX4 1742 aa17.58■□□□□ 0.41
USP49-201ENST00000373006 BECN1Q14457 450 aa17.58■□□□□ 0.4
USP49-201ENST00000373006 FAM43AQ8N2R8 423 aa17.58■□□□□ 0.4
USP49-201ENST00000373006 ZMYND15Q9H091 742 aa17.58■□□□□ 0.4
USP49-201ENST00000373006 NUP160Q12769 1436 aa17.58■□□□□ 0.4
USP49-201ENST00000373006 CENPJQ9HC77 1338 aaPredicted RBP17.58■□□□□ 0.4
USP49-201ENST00000373006 EIF2AK4Q9P2K8 1649 aaKnown RBP17.57■□□□□ 0.4
USP49-201ENST00000373006 CGNL1Q0VF96 1302 aa17.57■□□□□ 0.4
USP49-201ENST00000373006 RRP7AQ9Y3A4 280 aaKnown RBP17.57■□□□□ 0.4
USP49-201ENST00000373006 CDC42BPBQ9Y5S2 1711 aa17.56■□□□□ 0.4
USP49-201ENST00000373006 TNNQ9UQP3 1299 aa17.56■□□□□ 0.4
USP49-201ENST00000373006 ASXL1Q8IXJ9 1541 aa17.56■□□□□ 0.4
USP49-201ENST00000373006 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
USP49-201ENST00000373006 BCL2L13Q9BXK5 485 aa17.56■□□□□ 0.4
USP49-201ENST00000373006 ARHGAP5Q13017 1502 aa17.56■□□□□ 0.4
USP49-201ENST00000373006 PIK3C2GO75747 1445 aa17.56■□□□□ 0.4
USP49-201ENST00000373006 PDE3AQ14432 1141 aa17.55■□□□□ 0.4
USP49-201ENST00000373006 GLIPR1L2Q4G1C9 344 aa17.55■□□□□ 0.4
USP49-201ENST00000373006 RSPH6AQ9H0K4 717 aa17.55■□□□□ 0.4
USP49-201ENST00000373006 WWC1Q8IX03 1113 aa17.54■□□□□ 0.4
USP49-201ENST00000373006 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
USP49-201ENST00000373006 CARD14Q9BXL6 1004 aa17.54■□□□□ 0.4
USP49-201ENST00000373006 UNC13BO14795 1591 aa17.53■□□□□ 0.4
USP49-201ENST00000373006 PCDHB15Q9Y5E8 787 aa17.53■□□□□ 0.4
USP49-201ENST00000373006 RLBP1P12271 317 aa17.51■□□□□ 0.39
USP49-201ENST00000373006 AFAP1Q8N556 730 aa17.51■□□□□ 0.39
USP49-201ENST00000373006 GZF1Q9H116 711 aaPredicted RBP17.51■□□□□ 0.39
USP49-201ENST00000373006 RRAGDQ9NQL2 400 aaPredicted RBP17.51■□□□□ 0.39
USP49-201ENST00000373006 TBC1D2Q9BYX2 928 aa17.5■□□□□ 0.39
USP49-201ENST00000373006 ANTXR1Q9H6X2 564 aa17.5■□□□□ 0.39
USP49-201ENST00000373006 UPF2Q9HAU5 1272 aaKnown RBP17.5■□□□□ 0.39
USP49-201ENST00000373006 PREX2Q70Z35 1606 aa17.5■□□□□ 0.39
USP49-201ENST00000373006 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
USP49-201ENST00000373006 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
USP49-201ENST00000373006 IQGAP3Q86VI3 1631 aa17.49■□□□□ 0.39
USP49-201ENST00000373006 CFAP70Q5T0N1 1121 aa17.49■□□□□ 0.39
USP49-201ENST00000373006 PDZRN3Q9UPQ7 1066 aa17.49■□□□□ 0.39
USP49-201ENST00000373006 ATP10AO60312 1499 aa17.49■□□□□ 0.39
USP49-201ENST00000373006 RARSP54136 660 aaKnown RBP17.48■□□□□ 0.39
USP49-201ENST00000373006 SYNMO15061 1565 aa17.47■□□□□ 0.39
USP49-201ENST00000373006 RNF17Q9BXT8 1623 aaKnown RBP17.47■□□□□ 0.39
USP49-201ENST00000373006 TBC1D32Q96NH3 1257 aa17.47■□□□□ 0.39
USP49-201ENST00000373006 ABCC2Q92887 1545 aa17.46■□□□□ 0.39
USP49-201ENST00000373006 PMFBP1Q8TBY8 1022 aa17.46■□□□□ 0.39
USP49-201ENST00000373006 NPC1L1Q9UHC9 1359 aa17.46■□□□□ 0.39
USP49-201ENST00000373006 NLRP1Q9C000 1473 aa17.46■□□□□ 0.39
USP49-201ENST00000373006 TTC37Q6PGP7 1564 aa17.46■□□□□ 0.39
USP49-201ENST00000373006 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
USP49-201ENST00000373006 L1TD1Q5T7N2 865 aaKnown RBP17.45■□□□□ 0.38
USP49-201ENST00000373006 EFCAB2Q5VUJ9 269 aa17.45■□□□□ 0.38
USP49-201ENST00000373006 TCP11L2Q8N4U5 519 aa17.45■□□□□ 0.38
USP49-201ENST00000373006 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
USP49-201ENST00000373006 DUOX2Q9NRD8 1548 aa17.44■□□□□ 0.38
USP49-201ENST00000373006 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
USP49-201ENST00000373006 XRCC6P12956 609 aaKnown RBP eCLIP17.43■□□□□ 0.38
USP49-201ENST00000373006 HSP90AA2PQ14568 343 aaPredicted RBP17.43■□□□□ 0.38
USP49-201ENST00000373006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.43■□□□□ 0.38
USP49-201ENST00000373006 MAST1Q9Y2H9 1570 aa17.43■□□□□ 0.38
USP49-201ENST00000373006 IQGAP1P46940 1657 aa17.43■□□□□ 0.38
USP49-201ENST00000373006 MORC1Q86VD1 984 aa17.42■□□□□ 0.38
USP49-201ENST00000373006 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
USP49-201ENST00000373006 SPAG9O60271 1321 aaKnown RBP17.41■□□□□ 0.38
USP49-201ENST00000373006 A0A0U1RQG5 324 aaPredicted RBP17.41■□□□□ 0.38
USP49-201ENST00000373006 GOLGA6L3A6NEY3 463 aa17.41■□□□□ 0.38
USP49-201ENST00000373006 MFAP1P55081 439 aaKnown RBP17.41■□□□□ 0.38
USP49-201ENST00000373006 NGEFQ8N5V2 710 aa17.41■□□□□ 0.38
USP49-201ENST00000373006 RWDD1Q9H446 243 aaPredicted RBP17.41■□□□□ 0.38
USP49-201ENST00000373006 MYOM1P52179 1685 aa17.4■□□□□ 0.38
USP49-201ENST00000373006 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
USP49-201ENST00000373006 ADGRF5Q8IZF2 1346 aa17.4■□□□□ 0.38
USP49-201ENST00000373006 KIF3BO15066 747 aa17.4■□□□□ 0.38
USP49-201ENST00000373006 RUNDC1Q96C34 613 aa17.4■□□□□ 0.38
USP49-201ENST00000373006 MCM4P33991 863 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms