RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 TMEM2Q9UHN6 1383 aa22.27■■□□□ 1.16
SNX21-203ENST00000372541 PHF23Q9BUL5 403 aaPredicted RBP22.25■■□□□ 1.15
SNX21-203ENST00000372541 SCAF11Q99590 1463 aaKnown RBP22.25■■□□□ 1.15
SNX21-203ENST00000372541 TMEM131LA2VDJ0 1609 aa22.24■■□□□ 1.15
SNX21-203ENST00000372541 MPHOSPH9Q99550 1183 aa22.24■■□□□ 1.15
SNX21-203ENST00000372541 LRRC7Q96NW7 1537 aa22.24■■□□□ 1.15
SNX21-203ENST00000372541 CHGAP10645 457 aaKnown RBP22.23■■□□□ 1.15
SNX21-203ENST00000372541 EID1Q9Y6B2 187 aa22.23■■□□□ 1.15
SNX21-203ENST00000372541 CLTCL1P53675 1640 aa22.21■■□□□ 1.15
SNX21-203ENST00000372541 HRCP23327 699 aa22.21■■□□□ 1.15
SNX21-203ENST00000372541 IQGAP1P46940 1657 aa22.2■■□□□ 1.15
SNX21-203ENST00000372541 TXNDC2Q86VQ3 553 aa22.2■■□□□ 1.14
SNX21-203ENST00000372541 LTKP29376 864 aa22.19■■□□□ 1.14
SNX21-203ENST00000372541 FOXD1Q16676 465 aa22.19■■□□□ 1.14
SNX21-203ENST00000372541 MYO5BQ9ULV0 1848 aa22.17■■□□□ 1.14
SNX21-203ENST00000372541 ZFYVE9O95405 1425 aa22.17■■□□□ 1.14
SNX21-203ENST00000372541 RIMS2Q9UQ26 1411 aa22.17■■□□□ 1.14
SNX21-203ENST00000372541 STRCP1A6NGW2 1772 aa22.17■■□□□ 1.14
SNX21-203ENST00000372541 CCDC144AA2RUR9 1427 aa22.14■■□□□ 1.14
SNX21-203ENST00000372541 HDGFP51858 240 aaKnown RBP22.14■■□□□ 1.13
SNX21-203ENST00000372541 TRIM26Q12899 539 aaPredicted RBP22.14■■□□□ 1.13
SNX21-203ENST00000372541 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
SNX21-203ENST00000372541 PPP1R15AO75807 674 aaPredicted RBP22.13■■□□□ 1.13
SNX21-203ENST00000372541 RGS17Q9UGC6 210 aaPredicted RBP22.13■■□□□ 1.13
SNX21-203ENST00000372541 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.12■■□□□ 1.13
SNX21-203ENST00000372541 KIF1BO60333 1816 aa22.11■■□□□ 1.13
SNX21-203ENST00000372541 ZNF326Q5BKZ1 582 aaKnown RBP22.11■■□□□ 1.13
SNX21-203ENST00000372541 PLEKHG1Q9ULL1 1385 aa22.09■■□□□ 1.13
SNX21-203ENST00000372541 BCANQ96GW7 911 aa22.07■■□□□ 1.12
SNX21-203ENST00000372541 NEXMIFQ5QGS0 1516 aa22.06■■□□□ 1.12
SNX21-203ENST00000372541 NUTM2DQ5VT03 806 aaPredicted RBP22.05■■□□□ 1.12
SNX21-203ENST00000372541 FAM135BQ49AJ0 1406 aa22.04■■□□□ 1.12
SNX21-203ENST00000372541 SLC26A8Q96RN1 970 aa22.02■■□□□ 1.12
SNX21-203ENST00000372541 ANKRD30BQ9BXX2 1392 aa22.01■■□□□ 1.11
SNX21-203ENST00000372541 RPGRIP1LQ68CZ1 1315 aa22.01■■□□□ 1.11
SNX21-203ENST00000372541 DIP2AQ14689 1571 aa22■■□□□ 1.11
SNX21-203ENST00000372541 SPATA31E1Q6ZUB1 1445 aa22■■□□□ 1.11
SNX21-203ENST00000372541 SETBP1Q9Y6X0 1596 aa21.98■■□□□ 1.11
SNX21-203ENST00000372541 TMEM94Q12767 1356 aa21.97■■□□□ 1.11
SNX21-203ENST00000372541 ADAMTS13Q76LX8 1427 aa21.97■■□□□ 1.11
SNX21-203ENST00000372541 KCNA6P17658 529 aa21.96■■□□□ 1.11
SNX21-203ENST00000372541 POTEAQ6S8J7 498 aa21.96■■□□□ 1.11
SNX21-203ENST00000372541 XIRP1Q702N8 1843 aaKnown RBP21.96■■□□□ 1.11
SNX21-203ENST00000372541 PPLO60437 1756 aa21.95■■□□□ 1.1
SNX21-203ENST00000372541 VGFO15240 615 aaPredicted RBP21.95■■□□□ 1.1
SNX21-203ENST00000372541 RGL3Q3MIN7 710 aa21.95■■□□□ 1.1
SNX21-203ENST00000372541 TBX22Q9Y458 520 aa21.94■■□□□ 1.1
SNX21-203ENST00000372541 NRXN3Q9Y4C0 1643 aa21.94■■□□□ 1.1
SNX21-203ENST00000372541 NWD1Q149M9 1564 aa21.93■■□□□ 1.1
SNX21-203ENST00000372541 NKTRP30414 1462 aaKnown RBP21.9■■□□□ 1.1
SNX21-203ENST00000372541 PIK3R4Q99570 1358 aa21.9■■□□□ 1.1
SNX21-203ENST00000372541 IFT172Q9UG01 1749 aa21.9■■□□□ 1.1
SNX21-203ENST00000372541 PROSER2Q86WR7 435 aaPredicted RBP21.9■■□□□ 1.1
SNX21-203ENST00000372541 RBM33Q96EV2 1170 aaKnown RBP21.88■■□□□ 1.09
SNX21-203ENST00000372541 MYOM2P54296 1465 aa21.86■■□□□ 1.09
SNX21-203ENST00000372541 CHD2O14647 1828 aaKnown RBP21.86■■□□□ 1.09
SNX21-203ENST00000372541 DHX57Q6P158 1386 aaKnown RBP21.86■■□□□ 1.09
SNX21-203ENST00000372541 ADGRF5Q8IZF2 1346 aa21.84■■□□□ 1.09
SNX21-203ENST00000372541 METP08581 1390 aa21.84■■□□□ 1.09
SNX21-203ENST00000372541 PIK3C2GO75747 1445 aa21.83■■□□□ 1.09
SNX21-203ENST00000372541 ROBO1Q9Y6N7 1651 aa21.83■■□□□ 1.09
SNX21-203ENST00000372541 SLAIN2Q9P270 581 aa21.82■■□□□ 1.08
SNX21-203ENST00000372541 PTPRUQ92729 1446 aa21.81■■□□□ 1.08
SNX21-203ENST00000372541 SETD1AO15047 1707 aaKnown RBP21.81■■□□□ 1.08
SNX21-203ENST00000372541 PCGF6Q9BYE7 350 aa21.81■■□□□ 1.08
SNX21-203ENST00000372541 XRN1Q8IZH2 1706 aaKnown RBP21.8■■□□□ 1.08
SNX21-203ENST00000372541 NRXN1Q9ULB1 1477 aa21.8■■□□□ 1.08
SNX21-203ENST00000372541 AMOTL2Q9Y2J4 779 aa21.8■■□□□ 1.08
SNX21-203ENST00000372541 MSH6P52701 1360 aa21.79■■□□□ 1.08
SNX21-203ENST00000372541 JCADQ9P266 1359 aa21.77■■□□□ 1.08
SNX21-203ENST00000372541 DCAF11Q8TEB1 546 aa21.77■■□□□ 1.08
SNX21-203ENST00000372541 STAC3Q96MF2 364 aa21.75■■□□□ 1.07
SNX21-203ENST00000372541 LAMC1P11047 1609 aa21.75■■□□□ 1.07
SNX21-203ENST00000372541 NCOA3Q9Y6Q9 1424 aa21.74■■□□□ 1.07
SNX21-203ENST00000372541 PTCH1Q13635 1447 aa21.73■■□□□ 1.07
SNX21-203ENST00000372541 KDM2AQ9Y2K7 1162 aa21.73■■□□□ 1.07
SNX21-203ENST00000372541 PRAG1Q86YV5 1406 aa21.72■■□□□ 1.07
SNX21-203ENST00000372541 ASXL1Q8IXJ9 1541 aa21.71■■□□□ 1.07
SNX21-203ENST00000372541 C14orf37Q86TY3 774 aa21.71■■□□□ 1.07
SNX21-203ENST00000372541 SIN3AQ96ST3 1273 aa21.71■■□□□ 1.07
SNX21-203ENST00000372541 C14orf93Q9H972 538 aaKnown RBP21.7■■□□□ 1.06
SNX21-203ENST00000372541 NEUROD1Q13562 356 aa21.69■■□□□ 1.06
SNX21-203ENST00000372541 CFAP70Q5T0N1 1121 aa21.68■■□□□ 1.06
SNX21-203ENST00000372541 PHLPP1O60346 1717 aa21.68■■□□□ 1.06
SNX21-203ENST00000372541 LRPPRCP42704 1394 aaKnown RBP21.67■■□□□ 1.06
SNX21-203ENST00000372541 ROBO2Q9HCK4 1378 aa21.67■■□□□ 1.06
SNX21-203ENST00000372541 SPATA31A6Q5VVP1 1343 aa21.67■■□□□ 1.06
SNX21-203ENST00000372541 TECPR2O15040 1411 aa21.66■■□□□ 1.06
SNX21-203ENST00000372541 TMEM132EQ6IEE7 984 aa21.66■■□□□ 1.06
SNX21-203ENST00000372541 COL16A1Q07092 1604 aaPredicted RBP21.66■■□□□ 1.06
SNX21-203ENST00000372541 YTHDC2Q9H6S0 1430 aaKnown RBP21.65■■□□□ 1.06
SNX21-203ENST00000372541 KNDC1Q76NI1 1749 aa21.64■■□□□ 1.06
SNX21-203ENST00000372541 C19orf44Q9H6X5 657 aa21.64■■□□□ 1.05
SNX21-203ENST00000372541 STK26Q9P289 416 aa21.64■■□□□ 1.05
SNX21-203ENST00000372541 LRP6O75581 1613 aa21.64■■□□□ 1.05
SNX21-203ENST00000372541 ADGRL3Q9HAR2 1447 aa21.63■■□□□ 1.05
SNX21-203ENST00000372541 ABCC11Q96J66 1382 aa21.63■■□□□ 1.05
SNX21-203ENST00000372541 ZNF772Q68DY9 489 aaPredicted RBP21.63■■□□□ 1.05
SNX21-203ENST00000372541 UPF1Q92900 1129 aaKnown RBP eCLIP21.63■■□□□ 1.05
SNX21-203ENST00000372541 L3MBTL2Q969R5 705 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms