RNA–Protein interactions for RNA: ENST00000372277.7

TMEM254-204, Transcript of transmembrane protein 254, humanhuman

TSL 5 BASIC

Gene TMEM254, Length 366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-204ENST00000372277 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.08■■□□□ 1.13
TMEM254-204ENST00000372277 BCANQ96GW7 911 aa22.08■■□□□ 1.13
TMEM254-204ENST00000372277 PPP1R15AO75807 674 aaPredicted RBP22.07■■□□□ 1.12
TMEM254-204ENST00000372277 PROSER2Q86WR7 435 aaPredicted RBP22.07■■□□□ 1.12
TMEM254-204ENST00000372277 FAM135BQ49AJ0 1406 aa22.06■■□□□ 1.12
TMEM254-204ENST00000372277 RIMS2Q9UQ26 1411 aa22.06■■□□□ 1.12
TMEM254-204ENST00000372277 IQGAP3Q86VI3 1631 aa22.06■■□□□ 1.12
TMEM254-204ENST00000372277 NWD1Q149M9 1564 aa22.05■■□□□ 1.12
TMEM254-204ENST00000372277 NUP155O75694 1391 aa22.05■■□□□ 1.12
TMEM254-204ENST00000372277 XIRP1Q702N8 1843 aaKnown RBP22.05■■□□□ 1.12
TMEM254-204ENST00000372277 TMEM131LA2VDJ0 1609 aa22.05■■□□□ 1.12
TMEM254-204ENST00000372277 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
TMEM254-204ENST00000372277 E9PCH4 1651 aa22.02■■□□□ 1.12
TMEM254-204ENST00000372277 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
TMEM254-204ENST00000372277 CHGAP10645 457 aaKnown RBP22.01■■□□□ 1.11
TMEM254-204ENST00000372277 ITGAEP38570 1179 aa22.01■■□□□ 1.11
TMEM254-204ENST00000372277 MSH6P52701 1360 aa21.99■■□□□ 1.11
TMEM254-204ENST00000372277 SENP3Q9H4L4 574 aaPredicted RBP21.98■■□□□ 1.11
TMEM254-204ENST00000372277 NCOA3Q9Y6Q9 1424 aa21.97■■□□□ 1.11
TMEM254-204ENST00000372277 PIK3R4Q99570 1358 aa21.97■■□□□ 1.11
TMEM254-204ENST00000372277 MYO5BQ9ULV0 1848 aa21.96■■□□□ 1.11
TMEM254-204ENST00000372277 DIP2AQ14689 1571 aa21.95■■□□□ 1.11
TMEM254-204ENST00000372277 PPARGC1BQ86YN6 1023 aaKnown RBP21.95■■□□□ 1.1
TMEM254-204ENST00000372277 RRBP1Q9P2E9 1410 aaKnown RBP21.94■■□□□ 1.1
TMEM254-204ENST00000372277 CHD2O14647 1828 aaKnown RBP21.94■■□□□ 1.1
TMEM254-204ENST00000372277 ADAMTS13Q76LX8 1427 aa21.93■■□□□ 1.1
TMEM254-204ENST00000372277 RBM33Q96EV2 1170 aaKnown RBP21.93■■□□□ 1.1
TMEM254-204ENST00000372277 SLAIN2Q9P270 581 aa21.93■■□□□ 1.1
TMEM254-204ENST00000372277 ROBO1Q9Y6N7 1651 aa21.9■■□□□ 1.1
TMEM254-204ENST00000372277 NUTM2DQ5VT03 806 aaPredicted RBP21.88■■□□□ 1.09
TMEM254-204ENST00000372277 TRPM2O94759 1503 aa21.87■■□□□ 1.09
TMEM254-204ENST00000372277 C19orf44Q9H6X5 657 aa21.86■■□□□ 1.09
TMEM254-204ENST00000372277 C14orf37Q86TY3 774 aa21.85■■□□□ 1.09
TMEM254-204ENST00000372277 CADPS2Q86UW7 1296 aa21.85■■□□□ 1.09
TMEM254-204ENST00000372277 NAIPQ13075 1403 aa21.85■■□□□ 1.09
TMEM254-204ENST00000372277 SPHKAPQ2M3C7 1700 aa21.85■■□□□ 1.09
TMEM254-204ENST00000372277 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.09
TMEM254-204ENST00000372277 ATF3P18847 181 aa21.82■■□□□ 1.08
TMEM254-204ENST00000372277 ZNF326Q5BKZ1 582 aaKnown RBP21.82■■□□□ 1.08
TMEM254-204ENST00000372277 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
TMEM254-204ENST00000372277 JCADQ9P266 1359 aa21.8■■□□□ 1.08
TMEM254-204ENST00000372277 HFM1A2PYH4 1435 aa21.8■■□□□ 1.08
TMEM254-204ENST00000372277 RGS17Q9UGC6 210 aaPredicted RBP21.79■■□□□ 1.08
TMEM254-204ENST00000372277 DCCP43146 1447 aa21.78■■□□□ 1.08
TMEM254-204ENST00000372277 PTPRUQ92729 1446 aa21.78■■□□□ 1.08
TMEM254-204ENST00000372277 PHLPP1O60346 1717 aa21.76■■□□□ 1.07
TMEM254-204ENST00000372277 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.75■■□□□ 1.07
TMEM254-204ENST00000372277 NRXN3Q9Y4C0 1643 aa21.75■■□□□ 1.07
TMEM254-204ENST00000372277 CLTCL1P53675 1640 aa21.74■■□□□ 1.07
TMEM254-204ENST00000372277 XRN1Q8IZH2 1706 aaKnown RBP21.73■■□□□ 1.07
TMEM254-204ENST00000372277 TRIM52Q96A61 297 aa21.73■■□□□ 1.07
TMEM254-204ENST00000372277 NEXMIFQ5QGS0 1516 aa21.73■■□□□ 1.07
TMEM254-204ENST00000372277 VGFO15240 615 aaPredicted RBP21.72■■□□□ 1.07
TMEM254-204ENST00000372277 SPATA31A6Q5VVP1 1343 aa21.72■■□□□ 1.07
TMEM254-204ENST00000372277 COL16A1Q07092 1604 aaPredicted RBP21.72■■□□□ 1.07
TMEM254-204ENST00000372277 AHDC1Q5TGY3 1603 aaPredicted RBP21.72■■□□□ 1.07
TMEM254-204ENST00000372277 METP08581 1390 aa21.72■■□□□ 1.07
TMEM254-204ENST00000372277 SLC4A1APQ9BWU0 796 aaKnown RBP21.71■■□□□ 1.07
TMEM254-204ENST00000372277 RPGRIP1LQ68CZ1 1315 aa21.71■■□□□ 1.07
TMEM254-204ENST00000372277 KIF1BO60333 1816 aa21.69■■□□□ 1.06
TMEM254-204ENST00000372277 BRINP3Q76B58 766 aa21.68■■□□□ 1.06
TMEM254-204ENST00000372277 POTEAQ6S8J7 498 aa21.67■■□□□ 1.06
TMEM254-204ENST00000372277 ADGRL3Q9HAR2 1447 aa21.66■■□□□ 1.06
TMEM254-204ENST00000372277 MST1RQ04912 1400 aa21.64■■□□□ 1.06
TMEM254-204ENST00000372277 ACIN1Q9UKV3 1341 aaKnown RBP21.63■■□□□ 1.05
TMEM254-204ENST00000372277 PTCH1Q13635 1447 aa21.63■■□□□ 1.05
TMEM254-204ENST00000372277 ASXL1Q8IXJ9 1541 aa21.62■■□□□ 1.05
TMEM254-204ENST00000372277 PRAG1Q86YV5 1406 aa21.62■■□□□ 1.05
TMEM254-204ENST00000372277 SHPRHQ149N8 1683 aa21.61■■□□□ 1.05
TMEM254-204ENST00000372277 MEX3CQ5U5Q3 659 aaKnown RBP21.6■■□□□ 1.05
TMEM254-204ENST00000372277 SETD5Q9C0A6 1442 aa21.6■■□□□ 1.05
TMEM254-204ENST00000372277 ZNF772Q68DY9 489 aaPredicted RBP21.59■■□□□ 1.05
TMEM254-204ENST00000372277 LRRC59Q96AG4 307 aaKnown RBP21.58■■□□□ 1.05
TMEM254-204ENST00000372277 LRP6O75581 1613 aa21.58■■□□□ 1.04
TMEM254-204ENST00000372277 CCDC144AA2RUR9 1427 aa21.56■■□□□ 1.04
TMEM254-204ENST00000372277 NHSL1Q5SYE7 1610 aa21.55■■□□□ 1.04
TMEM254-204ENST00000372277 ROBO2Q9HCK4 1378 aa21.54■■□□□ 1.04
TMEM254-204ENST00000372277 SETD1AO15047 1707 aaKnown RBP21.54■■□□□ 1.04
TMEM254-204ENST00000372277 NALCNQ8IZF0 1738 aa21.54■■□□□ 1.04
TMEM254-204ENST00000372277 ANKRD30BQ9BXX2 1392 aa21.53■■□□□ 1.04
TMEM254-204ENST00000372277 MPHOSPH9Q99550 1183 aa21.53■■□□□ 1.04
TMEM254-204ENST00000372277 PPLO60437 1756 aa21.53■■□□□ 1.04
TMEM254-204ENST00000372277 C1orf167Q5SNV9 1468 aa21.52■■□□□ 1.04
TMEM254-204ENST00000372277 FOXD1Q16676 465 aa21.51■■□□□ 1.03
TMEM254-204ENST00000372277 SPATA31E1Q6ZUB1 1445 aa21.5■■□□□ 1.03
TMEM254-204ENST00000372277 NUTM2BA6NNL0 878 aaPredicted RBP21.49■■□□□ 1.03
TMEM254-204ENST00000372277 NUTM2EB1AL46 878 aaPredicted RBP21.49■■□□□ 1.03
TMEM254-204ENST00000372277 NUTM2AQ8IVF1 878 aaPredicted RBP21.49■■□□□ 1.03
TMEM254-204ENST00000372277 ADGRF5Q8IZF2 1346 aa21.47■■□□□ 1.03
TMEM254-204ENST00000372277 LAMC1P11047 1609 aa21.47■■□□□ 1.03
TMEM254-204ENST00000372277 PNPLA6Q8IY17 1366 aa21.47■■□□□ 1.03
TMEM254-204ENST00000372277 RGL3Q3MIN7 710 aa21.46■■□□□ 1.03
TMEM254-204ENST00000372277 SOS2Q07890 1332 aaPredicted RBP21.45■■□□□ 1.02
TMEM254-204ENST00000372277 TECPR2O15040 1411 aa21.45■■□□□ 1.02
TMEM254-204ENST00000372277 RXRBP28702 533 aa21.44■■□□□ 1.02
TMEM254-204ENST00000372277 DDX17Q92841 729 aaKnown RBP21.44■■□□□ 1.02
TMEM254-204ENST00000372277 ORAI2Q96SN7 254 aa21.43■■□□□ 1.02
TMEM254-204ENST00000372277 AFF2P51816 1311 aa21.43■■□□□ 1.02
TMEM254-204ENST00000372277 LRPPRCP42704 1394 aaKnown RBP21.43■■□□□ 1.02
TMEM254-204ENST00000372277 ABCC11Q96J66 1382 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms