RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 NEXMIFQ5QGS0 1516 aa22.77■■□□□ 1.24
TMEM53-204ENST00000372243 MYOM2P54296 1465 aa22.76■■□□□ 1.23
TMEM53-204ENST00000372243 THEMISQ8N1K5 641 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-204ENST00000372243 ZFYVE9O95405 1425 aa22.74■■□□□ 1.23
TMEM53-204ENST00000372243 TMEM2Q9UHN6 1383 aa22.73■■□□□ 1.23
TMEM53-204ENST00000372243 SLIT1O75093 1534 aa22.73■■□□□ 1.23
TMEM53-204ENST00000372243 ARHGAP23Q9P227 1491 aa22.72■■□□□ 1.23
TMEM53-204ENST00000372243 RIMS2Q9UQ26 1411 aa22.71■■□□□ 1.23
TMEM53-204ENST00000372243 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
TMEM53-204ENST00000372243 HDGFP51858 240 aaKnown RBP22.71■■□□□ 1.23
TMEM53-204ENST00000372243 NRXN1Q9ULB1 1477 aa22.71■■□□□ 1.23
TMEM53-204ENST00000372243 KDM2AQ9Y2K7 1162 aa22.71■■□□□ 1.23
TMEM53-204ENST00000372243 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.7■■□□□ 1.22
TMEM53-204ENST00000372243 PRAG1Q86YV5 1406 aa22.69■■□□□ 1.22
TMEM53-204ENST00000372243 ADGRF5Q8IZF2 1346 aa22.65■■□□□ 1.22
TMEM53-204ENST00000372243 NBPF8Q3BBV2 869 aa22.65■■□□□ 1.22
TMEM53-204ENST00000372243 PIK3C2GO75747 1445 aa22.64■■□□□ 1.22
TMEM53-204ENST00000372243 EID1Q9Y6B2 187 aa22.63■■□□□ 1.21
TMEM53-204ENST00000372243 KIAA1210Q9ULL0 1709 aa22.62■■□□□ 1.21
TMEM53-204ENST00000372243 LMTK3Q96Q04 1460 aa22.62■■□□□ 1.21
TMEM53-204ENST00000372243 TRPM1Q7Z4N2 1603 aa22.62■■□□□ 1.21
TMEM53-204ENST00000372243 RALGAPBQ86X10 1494 aa22.6■■□□□ 1.21
TMEM53-204ENST00000372243 SCAF11Q99590 1463 aaKnown RBP22.6■■□□□ 1.21
TMEM53-204ENST00000372243 NUTM2DQ5VT03 806 aaPredicted RBP22.6■■□□□ 1.21
TMEM53-204ENST00000372243 TXNDC2Q86VQ3 553 aa22.6■■□□□ 1.21
TMEM53-204ENST00000372243 LTKP29376 864 aa22.59■■□□□ 1.21
TMEM53-204ENST00000372243 LAMC1P11047 1609 aa22.59■■□□□ 1.21
TMEM53-204ENST00000372243 PLEKHG1Q9ULL1 1385 aa22.59■■□□□ 1.21
TMEM53-204ENST00000372243 SETBP1Q9Y6X0 1596 aa22.58■■□□□ 1.21
TMEM53-204ENST00000372243 ANKLE2Q86XL3 938 aa22.58■■□□□ 1.2
TMEM53-204ENST00000372243 C14orf93Q9H972 538 aaKnown RBP22.56■■□□□ 1.2
TMEM53-204ENST00000372243 POLR1AO95602 1720 aaPredicted RBP22.55■■□□□ 1.2
TMEM53-204ENST00000372243 NRXN3Q9Y4C0 1643 aa22.55■■□□□ 1.2
TMEM53-204ENST00000372243 GPRASP1Q5JY77 1395 aa22.54■■□□□ 1.2
TMEM53-204ENST00000372243 MED14O60244 1454 aa22.53■■□□□ 1.2
TMEM53-204ENST00000372243 ALKQ9UM73 1620 aa22.53■■□□□ 1.2
TMEM53-204ENST00000372243 IQGAP1P46940 1657 aa22.52■■□□□ 1.2
TMEM53-204ENST00000372243 CFAP70Q5T0N1 1121 aa22.52■■□□□ 1.2
TMEM53-204ENST00000372243 ROCK2O75116 1388 aaKnown RBP22.52■■□□□ 1.2
TMEM53-204ENST00000372243 SETD1AO15047 1707 aaKnown RBP22.5■■□□□ 1.19
TMEM53-204ENST00000372243 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
TMEM53-204ENST00000372243 NBPF1Q3BBV0 1214 aa22.5■■□□□ 1.19
TMEM53-204ENST00000372243 ADAMTS13Q76LX8 1427 aa22.49■■□□□ 1.19
TMEM53-204ENST00000372243 ADGRB1O14514 1584 aa22.48■■□□□ 1.19
TMEM53-204ENST00000372243 HSPA2P54652 639 aa22.48■■□□□ 1.19
TMEM53-204ENST00000372243 NPHP4O75161 1426 aaPredicted RBP22.47■■□□□ 1.19
TMEM53-204ENST00000372243 CARD11Q9BXL7 1154 aa22.46■■□□□ 1.19
TMEM53-204ENST00000372243 BCANQ96GW7 911 aa22.46■■□□□ 1.19
TMEM53-204ENST00000372243 TBX22Q9Y458 520 aa22.46■■□□□ 1.19
TMEM53-204ENST00000372243 NCKAP5LQ9HCH0 1330 aa22.45■■□□□ 1.18
TMEM53-204ENST00000372243 ASXL1Q8IXJ9 1541 aa22.45■■□□□ 1.18
TMEM53-204ENST00000372243 STRCQ7RTU9 1775 aa22.43■■□□□ 1.18
TMEM53-204ENST00000372243 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
TMEM53-204ENST00000372243 PIK3R4Q99570 1358 aa22.41■■□□□ 1.18
TMEM53-204ENST00000372243 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
TMEM53-204ENST00000372243 SLC26A8Q96RN1 970 aa22.4■■□□□ 1.18
TMEM53-204ENST00000372243 METP08581 1390 aa22.4■■□□□ 1.18
TMEM53-204ENST00000372243 EIF4G2P78344 907 aaKnown RBP eCLIP22.39■■□□□ 1.18
TMEM53-204ENST00000372243 YTHDC2Q9H6S0 1430 aaKnown RBP22.39■■□□□ 1.17
TMEM53-204ENST00000372243 USP47Q96K76 1375 aa22.38■■□□□ 1.17
TMEM53-204ENST00000372243 LRPPRCP42704 1394 aaKnown RBP22.38■■□□□ 1.17
TMEM53-204ENST00000372243 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
TMEM53-204ENST00000372243 EIF3AQ14152 1382 aaKnown RBP22.35■■□□□ 1.17
TMEM53-204ENST00000372243 ABCC11Q96J66 1382 aa22.35■■□□□ 1.17
TMEM53-204ENST00000372243 KNDC1Q76NI1 1749 aa22.35■■□□□ 1.17
TMEM53-204ENST00000372243 TECPR2O15040 1411 aa22.35■■□□□ 1.17
TMEM53-204ENST00000372243 DLC1Q96QB1 1528 aa22.34■■□□□ 1.17
TMEM53-204ENST00000372243 ARHGEF28Q8N1W1 1705 aaKnown RBP22.33■■□□□ 1.17
TMEM53-204ENST00000372243 CHD2O14647 1828 aaKnown RBP22.33■■□□□ 1.16
TMEM53-204ENST00000372243 HSPA5P11021 654 aaKnown RBP22.33■■□□□ 1.16
TMEM53-204ENST00000372243 DMRT2Q9Y5R5 561 aa22.32■■□□□ 1.16
TMEM53-204ENST00000372243 PTPRUQ92729 1446 aa22.32■■□□□ 1.16
TMEM53-204ENST00000372243 SIRT1Q96EB6 747 aa22.31■■□□□ 1.16
TMEM53-204ENST00000372243 TRAK1Q9UPV9 953 aa22.31■■□□□ 1.16
TMEM53-204ENST00000372243 CPS1P31327 1500 aa22.31■■□□□ 1.16
TMEM53-204ENST00000372243 XRN1Q8IZH2 1706 aaKnown RBP22.31■■□□□ 1.16
TMEM53-204ENST00000372243 STK26Q9P289 416 aa22.29■■□□□ 1.16
TMEM53-204ENST00000372243 ST20-MTHFSA0A0A6YYL1 179 aa22.29■■□□□ 1.16
TMEM53-204ENST00000372243 NWD1Q149M9 1564 aa22.28■■□□□ 1.16
TMEM53-204ENST00000372243 FAM135BQ49AJ0 1406 aa22.28■■□□□ 1.16
TMEM53-204ENST00000372243 AMOTL2Q9Y2J4 779 aa22.28■■□□□ 1.16
TMEM53-204ENST00000372243 PTCH1Q13635 1447 aa22.27■■□□□ 1.16
TMEM53-204ENST00000372243 SBNO2Q9Y2G9 1366 aa22.26■■□□□ 1.15
TMEM53-204ENST00000372243 CENPJQ9HC77 1338 aaPredicted RBP22.26■■□□□ 1.15
TMEM53-204ENST00000372243 KCNA6P17658 529 aa22.25■■□□□ 1.15
TMEM53-204ENST00000372243 SLC24A1O60721 1099 aa22.25■■□□□ 1.15
TMEM53-204ENST00000372243 QRICH2Q9H0J4 1663 aa22.23■■□□□ 1.15
TMEM53-204ENST00000372243 ROBO2Q9HCK4 1378 aa22.23■■□□□ 1.15
TMEM53-204ENST00000372243 PRAM1Q96QH2 718 aa22.22■■□□□ 1.15
TMEM53-204ENST00000372243 TESK2Q96S53 571 aa22.22■■□□□ 1.15
TMEM53-204ENST00000372243 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
TMEM53-204ENST00000372243 NKTRP30414 1462 aaKnown RBP22.21■■□□□ 1.15
TMEM53-204ENST00000372243 ZNF316A6NFI3 1004 aaPredicted RBP22.21■■□□□ 1.15
TMEM53-204ENST00000372243 POGKQ9P215 609 aa22.21■■□□□ 1.15
TMEM53-204ENST00000372243 WAPLQ7Z5K2 1190 aa22.18■■□□□ 1.14
TMEM53-204ENST00000372243 PLEKHH1Q9ULM0 1364 aa22.17■■□□□ 1.14
TMEM53-204ENST00000372243 STRCP1A6NGW2 1772 aa22.17■■□□□ 1.14
TMEM53-204ENST00000372243 TMF1P82094 1093 aa22.16■■□□□ 1.14
TMEM53-204ENST00000372243 SAFB2Q14151 953 aaKnown RBP eCLIP22.13■■□□□ 1.13
TMEM53-204ENST00000372243 ADGRB2O60241 1585 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms