RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 CHD2O14647 1828 aaKnown RBP24.3■■□□□ 1.48
SSR4-204ENST00000370087 CHIC2Q9UKJ5 165 aa24.29■■□□□ 1.48
SSR4-204ENST00000370087 ANKRD30AQ9BXX3 1397 aa24.27■■□□□ 1.48
SSR4-204ENST00000370087 COL16A1Q07092 1604 aaPredicted RBP24.26■■□□□ 1.47
SSR4-204ENST00000370087 ZFYVE9O95405 1425 aa24.26■■□□□ 1.47
SSR4-204ENST00000370087 TMEM131LA2VDJ0 1609 aa24.24■■□□□ 1.47
SSR4-204ENST00000370087 MSH6P52701 1360 aa24.23■■□□□ 1.47
SSR4-204ENST00000370087 ADGRL2O95490 1459 aa24.23■■□□□ 1.47
SSR4-204ENST00000370087 LRP6O75581 1613 aa24.2■■□□□ 1.46
SSR4-204ENST00000370087 PLEKHG1Q9ULL1 1385 aa24.19■■□□□ 1.46
SSR4-204ENST00000370087 RPRD2Q5VT52 1461 aaKnown RBP24.19■■□□□ 1.46
SSR4-204ENST00000370087 SLAIN2Q9P270 581 aa24.18■■□□□ 1.46
SSR4-204ENST00000370087 RIMS2Q9UQ26 1411 aa24.18■■□□□ 1.46
SSR4-204ENST00000370087 JCADQ9P266 1359 aa24.17■■□□□ 1.46
SSR4-204ENST00000370087 BCANQ96GW7 911 aa24.17■■□□□ 1.46
SSR4-204ENST00000370087 SLC52A1Q9NWF4 448 aa24.17■■□□□ 1.46
SSR4-204ENST00000370087 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.15■■□□□ 1.46
SSR4-204ENST00000370087 UNC13BO14795 1591 aa24.13■■□□□ 1.45
SSR4-204ENST00000370087 E9PCH4 1651 aa24.13■■□□□ 1.45
SSR4-204ENST00000370087 SHPRHQ149N8 1683 aa24.12■■□□□ 1.45
SSR4-204ENST00000370087 ANKRD50Q9ULJ7 1429 aa24.12■■□□□ 1.45
SSR4-204ENST00000370087 AHDC1Q5TGY3 1603 aaPredicted RBP24.12■■□□□ 1.45
SSR4-204ENST00000370087 ADAMTS13Q76LX8 1427 aa24.11■■□□□ 1.45
SSR4-204ENST00000370087 APLP2Q06481 763 aa24.09■■□□□ 1.45
SSR4-204ENST00000370087 DIP2AQ14689 1571 aa24.08■■□□□ 1.45
SSR4-204ENST00000370087 PPP1R15AO75807 674 aaPredicted RBP24.08■■□□□ 1.45
SSR4-204ENST00000370087 NUTM2DQ5VT03 806 aaPredicted RBP24.06■■□□□ 1.44
SSR4-204ENST00000370087 NCOA3Q9Y6Q9 1424 aa24.05■■□□□ 1.44
SSR4-204ENST00000370087 TBX22Q9Y458 520 aa24.05■■□□□ 1.44
SSR4-204ENST00000370087 IQGAP3Q86VI3 1631 aa24.03■■□□□ 1.44
SSR4-204ENST00000370087 FAM50AQ14320 339 aaKnown RBP24.03■■□□□ 1.44
SSR4-204ENST00000370087 PTPRUQ92729 1446 aa24.02■■□□□ 1.44
SSR4-204ENST00000370087 SPATA31A6Q5VVP1 1343 aa24.02■■□□□ 1.44
SSR4-204ENST00000370087 NRXN3Q9Y4C0 1643 aa24.01■■□□□ 1.43
SSR4-204ENST00000370087 TRPM2O94759 1503 aa24■■□□□ 1.43
SSR4-204ENST00000370087 CHGAP10645 457 aaKnown RBP24■■□□□ 1.43
SSR4-204ENST00000370087 C14orf37Q86TY3 774 aa24■■□□□ 1.43
SSR4-204ENST00000370087 XRN1Q8IZH2 1706 aaKnown RBP23.99■■□□□ 1.43
SSR4-204ENST00000370087 MEX3CQ5U5Q3 659 aaKnown RBP23.98■■□□□ 1.43
SSR4-204ENST00000370087 UPF1Q92900 1129 aaKnown RBP eCLIP23.98■■□□□ 1.43
SSR4-204ENST00000370087 TRIM52Q96A61 297 aa23.98■■□□□ 1.43
SSR4-204ENST00000370087 NHSL1Q5SYE7 1610 aa23.97■■□□□ 1.43
SSR4-204ENST00000370087 PIK3R4Q99570 1358 aa23.97■■□□□ 1.43
SSR4-204ENST00000370087 HDGFP51858 240 aaKnown RBP23.96■■□□□ 1.43
SSR4-204ENST00000370087 CADPS2Q86UW7 1296 aa23.96■■□□□ 1.43
SSR4-204ENST00000370087 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.96■■□□□ 1.43
SSR4-204ENST00000370087 C19orf44Q9H6X5 657 aa23.96■■□□□ 1.43
SSR4-204ENST00000370087 ASXL1Q8IXJ9 1541 aa23.95■■□□□ 1.43
SSR4-204ENST00000370087 ATF3P18847 181 aa23.94■■□□□ 1.42
SSR4-204ENST00000370087 ZNF772Q68DY9 489 aaPredicted RBP23.94■■□□□ 1.42
SSR4-204ENST00000370087 BRINP3Q76B58 766 aa23.94■■□□□ 1.42
SSR4-204ENST00000370087 SETBP1Q9Y6X0 1596 aa23.91■■□□□ 1.42
SSR4-204ENST00000370087 AMOTL2Q9Y2J4 779 aa23.91■■□□□ 1.42
SSR4-204ENST00000370087 MST1RQ04912 1400 aa23.9■■□□□ 1.42
SSR4-204ENST00000370087 SPHKAPQ2M3C7 1700 aa23.9■■□□□ 1.42
SSR4-204ENST00000370087 NUTM2BA6NNL0 878 aaPredicted RBP23.89■■□□□ 1.41
SSR4-204ENST00000370087 NUTM2EB1AL46 878 aaPredicted RBP23.89■■□□□ 1.41
SSR4-204ENST00000370087 NUTM2AQ8IVF1 878 aaPredicted RBP23.89■■□□□ 1.41
SSR4-204ENST00000370087 DCCP43146 1447 aa23.89■■□□□ 1.41
SSR4-204ENST00000370087 NALCNQ8IZF0 1738 aa23.89■■□□□ 1.41
SSR4-204ENST00000370087 CDK12Q9NYV4 1490 aaPredicted RBP23.87■■□□□ 1.41
SSR4-204ENST00000370087 SETD5Q9C0A6 1442 aa23.86■■□□□ 1.41
SSR4-204ENST00000370087 ROCK1Q13464 1354 aa23.86■■□□□ 1.41
SSR4-204ENST00000370087 RXRBP28702 533 aa23.85■■□□□ 1.41
SSR4-204ENST00000370087 AFF2P51816 1311 aa23.84■■□□□ 1.41
SSR4-204ENST00000370087 NUP155O75694 1391 aa23.83■■□□□ 1.41
SSR4-204ENST00000370087 METP08581 1390 aa23.83■■□□□ 1.41
SSR4-204ENST00000370087 RGS12O14924 1447 aa23.83■■□□□ 1.4
SSR4-204ENST00000370087 DDX17Q92841 729 aaKnown RBP23.81■■□□□ 1.4
SSR4-204ENST00000370087 CLTCL1P53675 1640 aa23.8■■□□□ 1.4
SSR4-204ENST00000370087 NEXMIFQ5QGS0 1516 aa23.79■■□□□ 1.4
SSR4-204ENST00000370087 ADGRL3Q9HAR2 1447 aa23.79■■□□□ 1.4
SSR4-204ENST00000370087 PNPLA6Q8IY17 1366 aa23.78■■□□□ 1.4
SSR4-204ENST00000370087 LAMC1P11047 1609 aa23.76■■□□□ 1.39
SSR4-204ENST00000370087 C8orf37Q96NL8 207 aa23.75■■□□□ 1.39
SSR4-204ENST00000370087 ITGAEP38570 1179 aa23.72■■□□□ 1.39
SSR4-204ENST00000370087 ZNF326Q5BKZ1 582 aaKnown RBP23.71■■□□□ 1.39
SSR4-204ENST00000370087 LRRC59Q96AG4 307 aaKnown RBP23.71■■□□□ 1.39
SSR4-204ENST00000370087 C1orf167Q5SNV9 1468 aa23.7■■□□□ 1.38
SSR4-204ENST00000370087 KIF1BO60333 1816 aa23.7■■□□□ 1.38
SSR4-204ENST00000370087 QTRT2Q9H974 415 aaKnown RBP23.69■■□□□ 1.38
SSR4-204ENST00000370087 SRCAPQ6ZRS2 3230 aa23.69■■□□□ 1.38
SSR4-204ENST00000370087 RBM6P78332 1123 aaKnown RBP23.67■■□□□ 1.38
SSR4-204ENST00000370087 ADAMTS2O95450 1211 aa23.66■■□□□ 1.38
SSR4-204ENST00000370087 COL22A1Q8NFW1 1626 aaPredicted RBP23.64■■□□□ 1.38
SSR4-204ENST00000370087 PTCH1Q13635 1447 aa23.64■■□□□ 1.37
SSR4-204ENST00000370087 ROBO2Q9HCK4 1378 aa23.64■■□□□ 1.37
SSR4-204ENST00000370087 EP400Q96L91 3159 aa23.61■■□□□ 1.37
SSR4-204ENST00000370087 ORAI2Q96SN7 254 aa23.61■■□□□ 1.37
SSR4-204ENST00000370087 NGLY1Q96IV0 654 aa23.6■■□□□ 1.37
SSR4-204ENST00000370087 SOS2Q07890 1332 aaPredicted RBP23.59■■□□□ 1.37
SSR4-204ENST00000370087 MARF1Q9Y4F3 1742 aaKnown RBP23.59■■□□□ 1.37
SSR4-204ENST00000370087 PPLO60437 1756 aa23.58■■□□□ 1.37
SSR4-204ENST00000370087 PPARGC1BQ86YN6 1023 aaKnown RBP23.58■■□□□ 1.37
SSR4-204ENST00000370087 PRAG1Q86YV5 1406 aa23.58■■□□□ 1.36
SSR4-204ENST00000370087 ATAD2Q6PL18 1390 aa23.56■■□□□ 1.36
SSR4-204ENST00000370087 ATRNO75882 1429 aa23.56■■□□□ 1.36
SSR4-204ENST00000370087 USP21Q9UK80 565 aa23.55■■□□□ 1.36
SSR4-204ENST00000370087 MYOM2P54296 1465 aa23.55■■□□□ 1.36
SSR4-204ENST00000370087 CDC42BPGQ6DT37 1551 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms